Nucleotide Global Alignment

Description

Query:
TRCN0000487812
Subject:
NM_001318102.1
Aligned Length:
1439
Identities:
1277
Gaps:
47

Alignment

Query    1  ATGAGCCTCCATTTCTTATACTACTGCAGTGAACCAACATTGGATGTGAAAATTGCCTTTTGTCAGGGATTCGA  74
            ||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAGCCTCCATTTCTTATACTACTGCAGTGAACCAACCTTGGATGTGAAAATTGCCTTTTGTCAGGGATTCGA  74

Query   75  TAAACAAGTGGATGTGTCATATATTGCCAAACATTACAACATGAGCAAAAGCAAAGTTGACAACCAGTTCTACA  148
            ||||||.|||||||||||||.|||||||||||||||||||||||||||||||||.||.||||||||||||||||
Sbjct   75  TAAACACGTGGATGTGTCATCTATTGCCAAACATTACAACATGAGCAAAAGCAAGGTGGACAACCAGTTCTACA  148

Query  149  GTGTGGAAGTGGGAGACTCAACCTTCACAGTTCTCAAGCGCTACCAGAATCTAAAGCCTATTGGCTCTGGGGCT  222
            |||||||||||||.||||||||||||||.|||||.||||||||||||||.||.|||||.|||||||||||||||
Sbjct  149  GTGTGGAAGTGGGGGACTCAACCTTCACCGTTCTTAAGCGCTACCAGAACCTGAAGCCAATTGGCTCTGGGGCT  222

Query  223  CAGGGCATAGTTTGTGCCGCGTATGATGCTGTCCTTGACAGAAATGTGGCCATTAAGAAGCTCAGCAGACCCTT  296
            |||||.|||||.|||||.|||||.||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CAGGGAATAGTCTGTGCTGCGTACGACGCTGTCCTTGACAGAAATGTGGCCATTAAGAAGCTCAGCAGACCCTT  296

Query  297  TCAGAACCAAACACATGCCAAGAGAGCGTACCGGGAGCTGGTCCTCATGAAGTGTGTGAACCATAAAAACATTA  370
            .|||||||||||.||.||||||||.||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CCAGAACCAAACTCACGCCAAGAGGGCTTACCGGGAGCTGGTCCTCATGAAGTGTGTGAACCATAAAAACATTA  370

Query  371  TTAGTTTATTAAATGTCTTCACACCCCAGAAAACGCTGGAGGAGTTCCAAGATGTTTACTTAGTAATGGAACTG  444
            ||||.|||||||||||.||.||||||||||||||.||||||||||||||||||||.||||||||.|||||||||
Sbjct  371  TTAGCTTATTAAATGTTTTTACACCCCAGAAAACACTGGAGGAGTTCCAAGATGTCTACTTAGTGATGGAACTG  444

Query  445  ATGGATGCCAACTTATGTCAAGTGATTCAGATGGAATTAGACCATGAGCGAATGTCTTACCTGCTGTACCAAAT  518
            |||||.||||||.|.|||||.||||||||||||||..|.|||||.|||||.|||||||||.||||||||||.||
Sbjct  445  ATGGACGCCAACCTGTGTCAGGTGATTCAGATGGAGCTGGACCACGAGCGGATGTCTTACTTGCTGTACCAGAT  518

Query  519  GTTGTGTGGCATTAAGCACCTCCATTCTGCTGGAATTATTCACAGGGATTTAAAACCAAGTAACATTGTAGTCA  592
            |.||||||||||.|||||||||||.||.|||||.||.||.||||||||.||||||||.||||||||||||||||
Sbjct  519  GCTGTGTGGCATCAAGCACCTCCACTCCGCTGGGATCATCCACAGGGACTTAAAACCCAGTAACATTGTAGTCA  592

Query  593  AGTCTGATTGCACATTGAAAATCCTGGACTTTGGACTGGCCAGGACAGCAGGCACAAGCTTCATGATGACTCCA  666
            ||||||||||||||.||||||||||.|||||.|||||||||||||||||.||.||||||||||||||||||||.
Sbjct  593  AGTCTGATTGCACACTGAAAATCCTCGACTTCGGACTGGCCAGGACAGCGGGTACAAGCTTCATGATGACTCCG  666

Query  667  TATGTGGTGACACGTTATTACAGAGCCCCTGAGGTCATCCTGGGGATGGGCTACAAGGAGAACGTGGATATATG  740
            |||||||||||.||.|||||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||
Sbjct  667  TATGTGGTGACGCGATATTACAGAGCCCCTGAGGTCATCCTGGGCATGGGCTACAAGGAGAACGTGGACATATG  740

Query  741  GTCTGTGGGATGCATTATGGGAGAAATGGTTCGCCACAAAATCCTCTTTCCAGGAAGGGACTATATTGACCAGT  814
            |||||||||||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct  741  GTCTGTGGGATGCATCATGGGAGAAATGGTTCGCCACAAAATCCTCTTTCCCGGAAGGGACTATATTGACCAGT  814

Query  815  GGAATAAGGTAATTGAACAACTAGGAACACCATGTCCAGAATTCATGAAGAAATTGCAACCCACAGTAAGAAAC  888
            ||||.||.||.||.||.||.||||||||.||.||||||||.|||||||||||||||||.||||||||.||||||
Sbjct  815  GGAACAAAGTCATCGAGCAGCTAGGAACTCCGTGTCCAGAGTTCATGAAGAAATTGCAGCCCACAGTCAGAAAC  888

Query  889  TATGTGGAGAATCGGCCCAAGTATGCGGGACTCACCTTCCCCAAACTCTTCCCAGATTCCCTCTTCCCAGCGGA  962
            ||.||||||||||||||||||||.||.|||||||||||||||||.|||||.|||||||||||||||||||||||
Sbjct  889  TACGTGGAGAATCGGCCCAAGTACGCAGGACTCACCTTCCCCAAGCTCTTTCCAGATTCCCTCTTCCCAGCGGA  962

Query  963  CTCCGAGCACAATAAACTCAAAGCCAGCCAAGCCAGGGACTTGTTGTCAAAGATGCTAGTGATTGACCCAGCAA  1036
            .||.||||||||||||||.||||||||||||||||||||.||||||||.||||||.||||||||||||||||.|
Sbjct  963  TTCTGAGCACAATAAACTTAAAGCCAGCCAAGCCAGGGATTTGTTGTCTAAGATGTTAGTGATTGACCCAGCGA  1036

Query 1037  AAAGAATATCAGTGGACGACGCCTTACAGCATCCCTACATCAACGTCTGGTATGACCCAGCCGAAGTGGAGGCG  1110
            |.||.|||||.|||||||||||..|.||||||||.|||||||||||.|||||.|||||.||.||||||||||||
Sbjct 1037  AGAGGATATCGGTGGACGACGCACTGCAGCATCCGTACATCAACGTTTGGTACGACCCGGCTGAAGTGGAGGCG  1110

Query 1111  CCTCCACCTCAGATATATGACAAGCAGTTGGATGAAAGAGAACACACAATTGAAGAATGGAAAGAACTTATCTA  1184
            |||||.||||||||||||||.||||||.||||||||||.||.|||||.||.|||||||||||||||||||||||
Sbjct 1111  CCTCCGCCTCAGATATATGATAAGCAGCTGGATGAAAGGGAGCACACCATCGAAGAATGGAAAGAACTTATCTA  1184

Query 1185  CAAGGAAGTAATGAATTCAGAAGAAAAGACTAAAAATGGTGTAGTAAAAGGACAGCCTTCTCCTTCAGCACAGG  1258
            ||||||.||||||||.||||||||.||||||||.|||||.|||||.|||||.|||||.||.||||     ||||
Sbjct 1185  CAAGGAGGTAATGAACTCAGAAGAGAAGACTAAGAATGGCGTAGTCAAAGGCCAGCCCTCGCCTT-----CAGG  1253

Query 1259  TGCAGCAGTGAACAGCAGTGAGAGTCTCCCTCCATCCTCGTCTGTCAATGACATCTCCTCCATGTCCACCGACC  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 1254  TGCAGCAGTGAACAGCAGTGAGAGTCTCCCTCCATCCTCGTCTGTCAACGACATCTCCTCCATGTCCACCGACC  1327

Query 1333  AGACCCTGGCATCTGACACTGACAGCAGCCTGGAAGCCTCGGCAGGACCCCTGGGTTGTTGCAGG---------  1397
            |||||||.||||||||||||||||||||||||||.||||||||.|||||..||||||||||||||         
Sbjct 1328  AGACCCTCGCATCTGACACTGACAGCAGCCTGGAGGCCTCGGCGGGACCGTTGGGTTGTTGCAGGTGACTAGCC  1401

Query 1398  ---------------------------------  1397
                                             
Sbjct 1402  GCCTGCCTGCGAAACCCAGCGTTCTTCAGGAGA  1434

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