Nucleotide Global Alignment

Description

Query:
TRCN0000487812
Subject:
NM_016700.4
Aligned Length:
1398
Identities:
924
Gaps:
247

Alignment

Query    1  ATGAGCCTCCATTTCTTATACTACTGCAGTGAACCAACATTGGATGTGAAAATTGCCTTTTGTCAGGGATTCGA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TAAACAAGTGGATGTGTCATATATTGCCAAACATTACAACATGAGCAAAAGCAAAGTTGACAACCAGTTCTACA  148
                                                    |||||||.|||||||..|||||||.|.||.||.|
Sbjct    1  ----------------------------------------ATGAGCAGAAGCAAACGTGACAACAATTTTTATA  34

Query  149  GTGTGGAAGTGGGAGACTCAACCTTCACAGTTCTCAAGCGCTACCAGAATCTAAAGCCTATTGGCTCTGGGGCT  222
            ||||.||..|.|||||.||.||.||||||||.||.||.||.|||||||||.||||||||||.|||||.||.|||
Sbjct   35  GTGTAGAGATTGGAGATTCTACATTCACAGTCCTAAAACGATACCAGAATTTAAAGCCTATAGGCTCAGGAGCT  108

Query  223  CAGGGCATAGTTTGTGCCGCGTATGATGCTGTCCTTGACAGAAATGTGGCCATTAAGAAGCTCAGCAGACCCTT  296
            ||.||.|||||.|||||.||.||||||||..|.|||||.||||||||.||.||.||||||||||||.|.||.||
Sbjct  109  CAAGGAATAGTGTGTGCAGCTTATGATGCCATTCTTGAAAGAAATGTTGCAATCAAGAAGCTCAGCCGGCCATT  182

Query  297  TCAGAACCAAACACATGCCAAGAGAGCGTACCGGGAGCTGGTCCTCATGAAGTGTGTGAACCATAAAAACATTA  370
            ||||||.||.||.|||||.|||.|.||.|||||.||.||.||.||.|||||||||||.||.||.|||||.||.|
Sbjct  183  TCAGAATCAGACCCATGCTAAGCGCGCCTACCGAGAACTAGTTCTTATGAAGTGTGTTAATCACAAAAATATAA  256

Query  371  TTAGTTTATTAAATGTCTTCACACCCCAGAAAACGCTGGAGGAGTTCCAAGATGTTTACTTAGTAATGGAACTG  444
            ||.|..|.||.|||||.||||||||.||||||.|.||.||.||.||.||||||||||||.||||.|||||.||.
Sbjct  257  TTGGCCTTTTGAATGTTTTCACACCACAGAAATCCCTAGAAGAATTTCAAGATGTTTACATAGTCATGGAGCTC  330

Query  445  ATGGATGCCAA-CTTATGTCAAGTGATTCAGATGGAATTAGACCATGAGCGAATGTCTTACCTGCTGTACCAAA  517
            ||||||||.|| ||| ||.|||||||||||||||||.|||||.|||||..|||||||.|||||.||.||.||||
Sbjct  331  ATGGATGCAAATCTT-TGCCAAGTGATTCAGATGGAGTTAGATCATGAAAGAATGTCCTACCTTCTCTATCAAA  403

Query  518  TGTTGTGTGGCATTAAGCACCTCCATTCTGCTGGAATTATTCACAGGGATTTAAAACCAAGTAACATTGTAGTC  591
            ||.|||||||.||.||||||||.||.|||||||||||||||||..||||.|||||.||.|||||.||.||||||
Sbjct  404  TGCTGTGTGGAATCAAGCACCTTCACTCTGCTGGAATTATTCATCGGGACTTAAAGCCTAGTAATATAGTAGTC  477

Query  592  AAGTCTGATTGCACATTGAAAATCCTGGACTTTGGACTGGCCAGGACAGCAGGCACAAGCTTCATGATGACTCC  665
            ||.||.||.|||||.|||||.||.||.||.|||||||||||.|||||.|||||.||.||.||.||||||||.||
Sbjct  478  AAATCAGACTGCACTTTGAAGATTCTTGATTTTGGACTGGCGAGGACTGCAGGAACGAGTTTTATGATGACGCC  551

Query  666  ATATGTGGTGACACGTTATTACAGAGCCCCTGAGGTCATCCTGGGGATGGGCTACAAGGAGAACGTGGATATAT  739
            .|||||||||||.||.||.||||||||.||.||||||||.||.||.|||||||||||||||||||||||..|||
Sbjct  552  TTATGTGGTGACTCGCTACTACAGAGCACCAGAGGTCATTCTCGGCATGGGCTACAAGGAGAACGTGGACTTAT  625

Query  740  GGTCTGTGGGATGCATTATGGGAGAAATGGTTCGCCACAAAATCCTCTTTCCAGGAAGGGACTATATTGACCAG  813
            ||||||||||.|||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||.|||
Sbjct  626  GGTCTGTGGGGTGCATTATGGGAGAAATGGTTTGCCACAAAATCCTCTTTCCAGGAAGGGACTATATTGATCAG  699

Query  814  TGGAATAAGGTAATTGAACAACTAGGAACACCATGTCCAGAATTCATGAAGAAATTGCAACCCACAGTAAGAAA  887
            ||||||||.||.||||||||.||.||||||||.|||||.|||||||||||||||.|.|||||.||||||||.|.
Sbjct  700  TGGAATAAAGTTATTGAACAGCTCGGAACACCTTGTCCTGAATTCATGAAGAAACTACAACCAACAGTAAGGAC  773

Query  888  CTATGTGGAGAATCGGCCCAAGTATGCGGGACTCACCTTCCCCAAACTCTTCCCAGATTCCCTCTTCCCAGCGG  961
            .|||||.||.||..||||.||.||.||.|||...|.|||....|||||.|||||.|||...||.||||||||.|
Sbjct  774  TTATGTTGAAAACAGGCCTAAATACGCTGGATATAGCTTTGAGAAACTGTTCCCCGATGTGCTTTTCCCAGCTG  847

Query  962  ACTCCGAGCACAATAAACTCAAAGCCAGCCAAGCCAGGGACTTGTTGTCAAAGATGCTAGTGATTGACCCAGCA  1035
            ||||.|||||.||.|||||.||||||||.||.||.||.||.|||||.||.||.||||||||.||.||..||.|.
Sbjct  848  ACTCAGAGCATAACAAACTTAAAGCCAGTCAGGCAAGAGATTTGTTATCCAAAATGCTAGTAATAGATGCATCC  921

Query 1036  AAAAGAATATCAGTGGACGACGCCTTACAGCATCCCTACATCAACGTCTGGTATGACCCAGCCGAAGTGGAGGC  1109
            |||||.||.||.||.||.||.||..|.|||||.||.||||||||||||||||||||.||..|.||||..||.||
Sbjct  922  AAAAGGATCTCCGTAGATGAAGCTCTCCAGCACCCATACATCAACGTCTGGTATGATCCTTCAGAAGCAGAAGC  995

Query 1110  GCCTCCACCTCAGATATATGACAAGCAGTTGGATGAAAGAGAACACACAATTGAAGAATGGAAAGAACTTATCT  1183
            .||.|||||..||||....|||||||||||.|||||.||.||.||||||||.||.||.|||||||||||.||.|
Sbjct  996  CCCACCACCAAAGATCCCGGACAAGCAGTTAGATGAGAGGGAGCACACAATAGAGGAGTGGAAAGAACTGATAT  1069

Query 1184  ACAAGGAAGTAATGAATTCAGAAGAAAAGACTAAAAATGGTGTAGTAAAAGGACAGCCTTCTCCTTCAGCACAG  1257
            |||||||.||||||.|||..||.|||...|||||.|||||.||..|||.|||.|||||.|||||||.|||||||
Sbjct 1070  ACAAGGAGGTAATGGATTTGGAGGAACGAACTAAGAATGGAGTCATAAGAGGGCAGCCGTCTCCTTTAGCACAG  1143

Query 1258  GTGCAGCAGTGAACAGCAGTGAGAGTCTCCCTCCATCCTCGTCTGTCAATGACATCTCCTCCATGTCCACCGAC  1331
            ||||||||.                                                                 
Sbjct 1144  GTGCAGCAA-----------------------------------------------------------------  1152

Query 1332  CAGACCCTGGCATCTGACACTGACAGCAGCCTGGAAGCCTCGGCAGGACCCCTGGGTTGTTGCAGG  1397
                                                                              
Sbjct 1153  ------------------------------------------------------------------  1152

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