Nucleotide Global Alignment
Description
- Query:
- TRCN0000487850
- Subject:
- XM_006509012.1
- Aligned Length:
- 2467
- Identities:
- 1103
- Gaps:
- 1241
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTGGGGCTGGAAGTGCCTCCTCTTCTGGGCTGTGCTGGTCACAGCCACTCTCTGCACTGCCAGGCCAGCCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AACCTTGCCTGAACAAGCTCAGCCCTGGGGAGTCCCTGTGGAAGTGGAGTCTCTCCTGGTCCACCCTGGCGACC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGCTACAGCTTCGCTGTCGGCTTCGCGATGATGTGCAGAGCATCAACTGGCTGCGGGATGGGGTGCAGCTGGTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGAGCAACCGTACCCGCATCACAGGGGAGGAGGTGGAGGTGCGGGACTCCATCCCCGCTGACTCTGGCCTCTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGCTTGCGTGACCAGCAGCCCCTCTGGCAGCGATACCACCTACTTCTCCGTCAATGTCTCAGATGCACTCCCAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCTCGGAAGATGATGACGACGACGATGACTCCTCCTCGGAGGAGAAAGAGACGGACAACACCAAACCAAACCGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGGCCTGTAGCTCCCTACTGGACATCCCCAGAGAAAATGGAGAAGAAACTGCATGCGGTGCCCGCTGCCAAGAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGTGAAGTTCAAGTGCCCGTCGAGTGGGACACCCAACCCCACTCTGCGCTGGTTGAAAAATGGCAAAGAGTTTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGCCTGACCACCGAATTGGAGGCTACAAGGTTCGCTATGCCACCTGGAGCATCATAATGGATTCTGTGGTGCCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCTGACAAGGGCAACTACACCTGCATCGTGGAGAATGAGTATGGGAGCATCAACCACACCTACCAGCTTGACGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CGTGGAACGATCTCCGCACCGACCCATCCTTCAGGCAGGGCTGCCTGCCAACAAGACAGTGGCCCTGGGCAGCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATGTGGAGTTCATGTGTAAGGTGTACAGCGATCCGCAGCCTCACATTCAGTGGCTGAAGCACATCGAGGTGAAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGGAGTAAGATCGGGCCAGACAACTTGCCGTATGTCCAGATCCTGAAGACTGCTGGAGTTAATACCACCGACAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGAAATGGAGGTGCTTCATCTACGGAATGTCTCCTTTGAGGATGCGGGGGAGTATACGTGCTTGGCGGGTAACT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTATCGGACTCTCCCATCACTCTGCATGGTTGACCGTTCTGGAAGCCCTGGAAGAGAGACCAGCTGTGATGACC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCACCGCTCTACCTGGAGATCATTATCTACTGCACCGGGGCCTTCCTGATCTCCTGCATGTTGGGCTCTGTCAT 1184
Query 1 -------------------------------------------------ATGGCTGTGCACAAGCTGGCCAAGA 25
|||||||||||||||||||||||||
Sbjct 1185 CATCTATAAGATGAAGAGCGGCACCAAGAAGAGCGACTTCCATAGCCAGATGGCTGTGCACAAGCTGGCCAAGA 1258
Query 26 GCATCCCTCTGCGCAGACAG------GTGTCTGCTGACTCCAGTGCATCCATGAACTCTGGGGTTCTTCTGGTT 93
|||||||||||||||||||| |||||.|||||||||||||||||||||||||||||||||||.||||||
Sbjct 1259 GCATCCCTCTGCGCAGACAGGTAACAGTGTCAGCTGACTCCAGTGCATCCATGAACTCTGGGGTTCTCCTGGTT 1332
Query 94 CGGCCATCACGGCTCTCCTCCAGTGGGACTCCCATGCTAGCAGGGGTCTCTGAGTATGAGCTTCCCGAAGACCC 167
|||||.|||||||||||||||||.|||||.||||||||.||.||.|||||.||.||||||||.||.||.||.||
Sbjct 1333 CGGCCCTCACGGCTCTCCTCCAGCGGGACCCCCATGCTGGCTGGAGTCTCCGAATATGAGCTCCCTGAGGATCC 1406
Query 168 TCGCTGGGAGCTGCCTCGGGACAGACTGGTCTTAGGCAAACCCCTGGGAGAGGGCTGCTTTGGGCAGGTGGTGT 241
.||||||||||||||.||.|||||||||||||||||||||||.||.||.|||||||||||.|||||||||||||
Sbjct 1407 CCGCTGGGAGCTGCCACGAGACAGACTGGTCTTAGGCAAACCACTTGGCGAGGGCTGCTTCGGGCAGGTGGTGT 1480
Query 242 TGGCAGAGGCTATCGGGCTGGACAAGGACAAACCCAACCGTGTGACCAAAGTGGCTGTGAAGATGTTGAAGTCG 315
||||.|||||.|||||||||||.||||||||||||||||||||||||||||||||.|||||||||||||||||.
Sbjct 1481 TGGCTGAGGCCATCGGGCTGGATAAGGACAAACCCAACCGTGTGACCAAAGTGGCCGTGAAGATGTTGAAGTCC 1554
Query 316 GACGCAACAGAGAAAGACTTGTCAGACCTGATCTCAGAAATGGAGATGATGAAGATGATCGGGAAGCATAAGAA 389
||||||||.|||||.|||.||||.||.||||||||.||.||||||||||||||.|||||.||||||||.|||||
Sbjct 1555 GACGCAACGGAGAAGGACCTGTCGGATCTGATCTCGGAGATGGAGATGATGAAAATGATTGGGAAGCACAAGAA 1628
Query 390 TATCATCAACCTGCTGGGGGCCTGCACGCAGGATGGTCC-CTTGTATGTCATCGTGGAGTATGCCTCCAAGGGC 462
||||||||||||.|||||.||.|||||.||||||||||| ||| ||||||||.||||||||.||||||||.|||
Sbjct 1629 TATCATCAACCTTCTGGGAGCGTGCACACAGGATGGTCCTCTT-TATGTCATTGTGGAGTACGCCTCCAAAGGC 1701
Query 463 AACCTGCGGGAGTACCTGCAGGCCCGGAGGCCCCCAGGGCTGGAATACTGCTACAACCCCAGCCACAACCCAGA 536
||.||.||||||||.||.||||||||||||||.||.||||||||.||||||||.|||||||||||||||||.||
Sbjct 1702 AATCTCCGGGAGTATCTACAGGCCCGGAGGCCTCCTGGGCTGGAGTACTGCTATAACCCCAGCCACAACCCCGA 1775
Query 537 GGAGCAGCTCTCCTCCAAGGACCTGGTGTCCTGCGCCTACCAGGTGGCCCGAGGCATGGAGTATCTGGCCTCCA 610
|||.|||||.||.|||||.||.|||||.|||||.|||||.||||||||.||.||||||||||||||.|||||.|
Sbjct 1776 GGAACAGCTGTCTTCCAAAGATCTGGTATCCTGTGCCTATCAGGTGGCTCGGGGCATGGAGTATCTTGCCTCTA 1849
Query 611 AGAAGTGCATACACCGAGACCTGGCAGCCAGGAATGTCCTGGTGACAGAGGACAATGTGATGAAGATAGCAGAC 684
|||||||.|||||||||||||||||.||.|||||.|||||||||||.|||||.||.||.||||||||.||||||
Sbjct 1850 AGAAGTGTATACACCGAGACCTGGCTGCTAGGAACGTCCTGGTGACCGAGGATAACGTAATGAAGATCGCAGAC 1923
Query 685 TTTGGCCTCGCACGGGACATTCACCACATCGACTACTATAAAAAGACAACCAACGGCCGACTGCCTGTGAAGTG 758
||||||.|.||.||.||||||||.||.|||||||||||.||.||.||.|||||||||||.||||||||||||||
Sbjct 1924 TTTGGCTTAGCTCGAGACATTCATCATATCGACTACTACAAGAAAACCACCAACGGCCGGCTGCCTGTGAAGTG 1997
Query 759 GATGGCACCCGAGGCATTATTTGACCGGATCTACACCCACCAGAGTGATGTGTGGTCTTTCGGGGTGCTCCTGT 832
||||||.||.|||||.||.|||||||||||||||||.||||||||.||||||||||||||.||.||||||.|||
Sbjct 1998 GATGGCCCCTGAGGCGTTGTTTGACCGGATCTACACACACCAGAGCGATGTGTGGTCTTTTGGAGTGCTCTTGT 2071
Query 833 GGGAGATCTTCACTCTGGGCGGCTCCCCATACCCCGGTGTGCCTGTGGAGGAACTTTTCAAGCTGCTGAAGGAG 906
|||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2072 GGGAGATCTTCACTCTGGGTGGCTCCCCATACCCCGGTGTGCCTGTGGAGGAACTTTTCAAGCTGCTGAAGGAG 2145
Query 907 GGTCACCGCATGGACAAGCCCAGTAACTGCACCAACGAGCTGTACATGATGATGCGGGACTGCTGGCATGCAGT 980
|||||.||.||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||||
Sbjct 2146 GGTCATCGAATGGACAAGCCCAGTAACTGTACCAATGAGCTGTACATGATGATGCGGGACTGCTGGCATGCAGT 2219
Query 981 GCCCTCACAGAGACCCACCTTCAAGCAGCTGGTGGAAGACCTGGACCGCATCGTGGCCTTGACCTCCAACCAGG 1054
||||||.||||||||.||.|||||||||.||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 2220 GCCCTCTCAGAGACCTACGTTCAAGCAGTTGGTGGAAGACCTGGACCGCATTGTGGCCTTGACCTCCAACCAGG 2293
Query 1055 AGTACCTGGACCTGTCCATGCCCCTGGACCAGTACTCCCCCAGCTTTCCCGACACCCGGAGCTCTACGTGCTCC 1128
||||.||||||||||||||.||.||||||||||||||.|||||||||||||||||.||||||||.||.||||||
Sbjct 2294 AGTATCTGGACCTGTCCATACCGCTGGACCAGTACTCACCCAGCTTTCCCGACACACGGAGCTCCACCTGCTCC 2367
Query 1129 TCAGGGGAGGATTCCGTCTTCTCTCATGAGCCGCTGCCCGAGGAGCCCTGCCTGCCCCGACACCCAGCCCAGCT 1202
|||||||||||.||.||||||||||||||||||.|.||.|||||||||||.|||||.||||||||..|||||||
Sbjct 2368 TCAGGGGAGGACTCTGTCTTCTCTCATGAGCCGTTACCTGAGGAGCCCTGTCTGCCTCGACACCCCACCCAGCT 2441
Query 1203 TGCCAATGGCGGACTCAAACGCCGC 1227
||||||..|.|||||||||||.|||
Sbjct 2442 TGCCAACAGTGGACTCAAACGGCGC 2466
