Nucleotide Global Alignment

Description

Query:
TRCN0000487850
Subject:
XM_011242120.1
Aligned Length:
2461
Identities:
1103
Gaps:
1235

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTGGGGCTGGAAGTGCCTCCTCTTCTGGGCTGTGCTGGTCACAGCCACTCTCTGCACTGCCAGGCCAGCCCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AACCTTGCCTGAACAAGCTCAGCCCTGGGGAGTCCCTGTGGAAGTGGAGTCTCTCCTGGTCCACCCTGGCGACC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGCTACAGCTTCGCTGTCGGCTTCGCGATGATGTGCAGAGCATCAACTGGCTGCGGGATGGGGTGCAGCTGGTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAGAGCAACCGTACCCGCATCACAGGGGAGGAGGTGGAGGTGCGGGACTCCATCCCCGCTGACTCTGGCCTCTA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CGCTTGCGTGACCAGCAGCCCCTCTGGCAGCGATACCACCTACTTCTCCGTCAATGTCTCAGATGCACTCCCAT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CCTCGGAAGATGATGACGACGACGATGACTCCTCCTCGGAGGAGAAAGAGACGGACAACACCAAACCAAACCGT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AGGCCTGTAGCTCCCTACTGGACATCCCCAGAGAAAATGGAGAAGAAACTGCATGCGGTGCCCGCTGCCAAGAC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGTGAAGTTCAAGTGCCCGTCGAGTGGGACACCCAACCCCACTCTGCGCTGGTTGAAAAATGGCAAAGAGTTTA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGCCTGACCACCGAATTGGAGGCTACAAGGTTCGCTATGCCACCTGGAGCATCATAATGGATTCTGTGGTGCCT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TCTGACAAGGGCAACTACACCTGCATCGTGGAGAATGAGTATGGGAGCATCAACCACACCTACCAGCTTGACGT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CGTGGAACGATCTCCGCACCGACCCATCCTTCAGGCAGGGCTGCCTGCCAACAAGACAGTGGCCCTGGGCAGCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ATGTGGAGTTCATGTGTAAGGTGTACAGCGATCCGCAGCCTCACATTCAGTGGCTGAAGCACATCGAGGTGAAC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GGGAGTAAGATCGGGCCAGACAACTTGCCGTATGTCCAGATCCTGAAGACTGCTGGAGTTAATACCACCGACAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGAAATGGAGGTGCTTCATCTACGGAATGTCTCCTTTGAGGATGCGGGGGAGTATACGTGCTTGGCGGGTAACT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CTATCGGACTCTCCCATCACTCTGCATGGTTGACCGTTCTGGAAGCCCTGGAAGAGAGACCAGCTGTGATGACC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TCACCGCTCTACCTGGAGATCATTATCTACTGCACCGGGGCCTTCCTGATCTCCTGCATGTTGGGCTCTGTCAT  1184

Query    1  -------------------------------------------------ATGGCTGTGCACAAGCTGGCCAAGA  25
                                                             |||||||||||||||||||||||||
Sbjct 1185  CATCTATAAGATGAAGAGCGGCACCAAGAAGAGCGACTTCCATAGCCAGATGGCTGTGCACAAGCTGGCCAAGA  1258

Query   26  GCATCCCTCTGCGCAGACAGGTGTCTGCTGACTCCAGTGCATCCATGAACTCTGGGGTTCTTCTGGTTCGGCCA  99
            |||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||.
Sbjct 1259  GCATCCCTCTGCGCAGACAGGTGTCAGCTGACTCCAGTGCATCCATGAACTCTGGGGTTCTCCTGGTTCGGCCC  1332

Query  100  TCACGGCTCTCCTCCAGTGGGACTCCCATGCTAGCAGGGGTCTCTGAGTATGAGCTTCCCGAAGACCCTCGCTG  173
            |||||||||||||||||.|||||.||||||||.||.||.|||||.||.||||||||.||.||.||.||.|||||
Sbjct 1333  TCACGGCTCTCCTCCAGCGGGACCCCCATGCTGGCTGGAGTCTCCGAATATGAGCTCCCTGAGGATCCCCGCTG  1406

Query  174  GGAGCTGCCTCGGGACAGACTGGTCTTAGGCAAACCCCTGGGAGAGGGCTGCTTTGGGCAGGTGGTGTTGGCAG  247
            |||||||||.||.|||||||||||||||||||||||.||.||.|||||||||||.|||||||||||||||||.|
Sbjct 1407  GGAGCTGCCACGAGACAGACTGGTCTTAGGCAAACCACTTGGCGAGGGCTGCTTCGGGCAGGTGGTGTTGGCTG  1480

Query  248  AGGCTATCGGGCTGGACAAGGACAAACCCAACCGTGTGACCAAAGTGGCTGTGAAGATGTTGAAGTCGGACGCA  321
            ||||.|||||||||||.||||||||||||||||||||||||||||||||.|||||||||||||||||.||||||
Sbjct 1481  AGGCCATCGGGCTGGATAAGGACAAACCCAACCGTGTGACCAAAGTGGCCGTGAAGATGTTGAAGTCCGACGCA  1554

Query  322  ACAGAGAAAGACTTGTCAGACCTGATCTCAGAAATGGAGATGATGAAGATGATCGGGAAGCATAAGAATATCAT  395
            ||.|||||.|||.||||.||.||||||||.||.||||||||||||||.|||||.||||||||.|||||||||||
Sbjct 1555  ACGGAGAAGGACCTGTCGGATCTGATCTCGGAGATGGAGATGATGAAAATGATTGGGAAGCACAAGAATATCAT  1628

Query  396  CAACCTGCTGGGGGCCTGCACGCAGGATGGTCC-CTTGTATGTCATCGTGGAGTATGCCTCCAAGGGCAACCTG  468
            ||||||.|||||.||.|||||.||||||||||| ||| ||||||||.||||||||.||||||||.|||||.||.
Sbjct 1629  CAACCTTCTGGGAGCGTGCACACAGGATGGTCCTCTT-TATGTCATTGTGGAGTACGCCTCCAAAGGCAATCTC  1701

Query  469  CGGGAGTACCTGCAGGCCCGGAGGCCCCCAGGGCTGGAATACTGCTACAACCCCAGCCACAACCCAGAGGAGCA  542
            ||||||||.||.||||||||||||||.||.||||||||.||||||||.|||||||||||||||||.|||||.||
Sbjct 1702  CGGGAGTATCTACAGGCCCGGAGGCCTCCTGGGCTGGAGTACTGCTATAACCCCAGCCACAACCCCGAGGAACA  1775

Query  543  GCTCTCCTCCAAGGACCTGGTGTCCTGCGCCTACCAGGTGGCCCGAGGCATGGAGTATCTGGCCTCCAAGAAGT  616
            |||.||.|||||.||.|||||.|||||.|||||.||||||||.||.||||||||||||||.|||||.|||||||
Sbjct 1776  GCTGTCTTCCAAAGATCTGGTATCCTGTGCCTATCAGGTGGCTCGGGGCATGGAGTATCTTGCCTCTAAGAAGT  1849

Query  617  GCATACACCGAGACCTGGCAGCCAGGAATGTCCTGGTGACAGAGGACAATGTGATGAAGATAGCAGACTTTGGC  690
            |.|||||||||||||||||.||.|||||.|||||||||||.|||||.||.||.||||||||.||||||||||||
Sbjct 1850  GTATACACCGAGACCTGGCTGCTAGGAACGTCCTGGTGACCGAGGATAACGTAATGAAGATCGCAGACTTTGGC  1923

Query  691  CTCGCACGGGACATTCACCACATCGACTACTATAAAAAGACAACCAACGGCCGACTGCCTGTGAAGTGGATGGC  764
            .|.||.||.||||||||.||.|||||||||||.||.||.||.|||||||||||.||||||||||||||||||||
Sbjct 1924  TTAGCTCGAGACATTCATCATATCGACTACTACAAGAAAACCACCAACGGCCGGCTGCCTGTGAAGTGGATGGC  1997

Query  765  ACCCGAGGCATTATTTGACCGGATCTACACCCACCAGAGTGATGTGTGGTCTTTCGGGGTGCTCCTGTGGGAGA  838
            .||.|||||.||.|||||||||||||||||.||||||||.||||||||||||||.||.||||||.|||||||||
Sbjct 1998  CCCTGAGGCGTTGTTTGACCGGATCTACACACACCAGAGCGATGTGTGGTCTTTTGGAGTGCTCTTGTGGGAGA  2071

Query  839  TCTTCACTCTGGGCGGCTCCCCATACCCCGGTGTGCCTGTGGAGGAACTTTTCAAGCTGCTGAAGGAGGGTCAC  912
            |||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 2072  TCTTCACTCTGGGTGGCTCCCCATACCCCGGTGTGCCTGTGGAGGAACTTTTCAAGCTGCTGAAGGAGGGTCAT  2145

Query  913  CGCATGGACAAGCCCAGTAACTGCACCAACGAGCTGTACATGATGATGCGGGACTGCTGGCATGCAGTGCCCTC  986
            ||.||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2146  CGAATGGACAAGCCCAGTAACTGTACCAATGAGCTGTACATGATGATGCGGGACTGCTGGCATGCAGTGCCCTC  2219

Query  987  ACAGAGACCCACCTTCAAGCAGCTGGTGGAAGACCTGGACCGCATCGTGGCCTTGACCTCCAACCAGGAGTACC  1060
            .||||||||.||.|||||||||.||||||||||||||||||||||.||||||||||||||||||||||||||.|
Sbjct 2220  TCAGAGACCTACGTTCAAGCAGTTGGTGGAAGACCTGGACCGCATTGTGGCCTTGACCTCCAACCAGGAGTATC  2293

Query 1061  TGGACCTGTCCATGCCCCTGGACCAGTACTCCCCCAGCTTTCCCGACACCCGGAGCTCTACGTGCTCCTCAGGG  1134
            |||||||||||||.||.||||||||||||||.|||||||||||||||||.||||||||.||.||||||||||||
Sbjct 2294  TGGACCTGTCCATACCGCTGGACCAGTACTCACCCAGCTTTCCCGACACACGGAGCTCCACCTGCTCCTCAGGG  2367

Query 1135  GAGGATTCCGTCTTCTCTCATGAGCCGCTGCCCGAGGAGCCCTGCCTGCCCCGACACCCAGCCCAGCTTGCCAA  1208
            |||||.||.||||||||||||||||||.|.||.|||||||||||.|||||.||||||||..|||||||||||||
Sbjct 2368  GAGGACTCTGTCTTCTCTCATGAGCCGTTACCTGAGGAGCCCTGTCTGCCTCGACACCCCACCCAGCTTGCCAA  2441

Query 1209  TGGCGGACTCAAACGCCGC  1227
            ..|.|||||||||||.|||
Sbjct 2442  CAGTGGACTCAAACGGCGC  2460

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