Nucleotide Global Alignment
Description
- Query:
- TRCN0000487850
- Subject:
- XM_011242120.1
- Aligned Length:
- 2461
- Identities:
- 1103
- Gaps:
- 1235
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTGGGGCTGGAAGTGCCTCCTCTTCTGGGCTGTGCTGGTCACAGCCACTCTCTGCACTGCCAGGCCAGCCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AACCTTGCCTGAACAAGCTCAGCCCTGGGGAGTCCCTGTGGAAGTGGAGTCTCTCCTGGTCCACCCTGGCGACC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGCTACAGCTTCGCTGTCGGCTTCGCGATGATGTGCAGAGCATCAACTGGCTGCGGGATGGGGTGCAGCTGGTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGAGCAACCGTACCCGCATCACAGGGGAGGAGGTGGAGGTGCGGGACTCCATCCCCGCTGACTCTGGCCTCTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGCTTGCGTGACCAGCAGCCCCTCTGGCAGCGATACCACCTACTTCTCCGTCAATGTCTCAGATGCACTCCCAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCTCGGAAGATGATGACGACGACGATGACTCCTCCTCGGAGGAGAAAGAGACGGACAACACCAAACCAAACCGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGGCCTGTAGCTCCCTACTGGACATCCCCAGAGAAAATGGAGAAGAAACTGCATGCGGTGCCCGCTGCCAAGAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGTGAAGTTCAAGTGCCCGTCGAGTGGGACACCCAACCCCACTCTGCGCTGGTTGAAAAATGGCAAAGAGTTTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGCCTGACCACCGAATTGGAGGCTACAAGGTTCGCTATGCCACCTGGAGCATCATAATGGATTCTGTGGTGCCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCTGACAAGGGCAACTACACCTGCATCGTGGAGAATGAGTATGGGAGCATCAACCACACCTACCAGCTTGACGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CGTGGAACGATCTCCGCACCGACCCATCCTTCAGGCAGGGCTGCCTGCCAACAAGACAGTGGCCCTGGGCAGCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATGTGGAGTTCATGTGTAAGGTGTACAGCGATCCGCAGCCTCACATTCAGTGGCTGAAGCACATCGAGGTGAAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGGAGTAAGATCGGGCCAGACAACTTGCCGTATGTCCAGATCCTGAAGACTGCTGGAGTTAATACCACCGACAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGAAATGGAGGTGCTTCATCTACGGAATGTCTCCTTTGAGGATGCGGGGGAGTATACGTGCTTGGCGGGTAACT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTATCGGACTCTCCCATCACTCTGCATGGTTGACCGTTCTGGAAGCCCTGGAAGAGAGACCAGCTGTGATGACC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCACCGCTCTACCTGGAGATCATTATCTACTGCACCGGGGCCTTCCTGATCTCCTGCATGTTGGGCTCTGTCAT 1184
Query 1 -------------------------------------------------ATGGCTGTGCACAAGCTGGCCAAGA 25
|||||||||||||||||||||||||
Sbjct 1185 CATCTATAAGATGAAGAGCGGCACCAAGAAGAGCGACTTCCATAGCCAGATGGCTGTGCACAAGCTGGCCAAGA 1258
Query 26 GCATCCCTCTGCGCAGACAGGTGTCTGCTGACTCCAGTGCATCCATGAACTCTGGGGTTCTTCTGGTTCGGCCA 99
|||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||.
Sbjct 1259 GCATCCCTCTGCGCAGACAGGTGTCAGCTGACTCCAGTGCATCCATGAACTCTGGGGTTCTCCTGGTTCGGCCC 1332
Query 100 TCACGGCTCTCCTCCAGTGGGACTCCCATGCTAGCAGGGGTCTCTGAGTATGAGCTTCCCGAAGACCCTCGCTG 173
|||||||||||||||||.|||||.||||||||.||.||.|||||.||.||||||||.||.||.||.||.|||||
Sbjct 1333 TCACGGCTCTCCTCCAGCGGGACCCCCATGCTGGCTGGAGTCTCCGAATATGAGCTCCCTGAGGATCCCCGCTG 1406
Query 174 GGAGCTGCCTCGGGACAGACTGGTCTTAGGCAAACCCCTGGGAGAGGGCTGCTTTGGGCAGGTGGTGTTGGCAG 247
|||||||||.||.|||||||||||||||||||||||.||.||.|||||||||||.|||||||||||||||||.|
Sbjct 1407 GGAGCTGCCACGAGACAGACTGGTCTTAGGCAAACCACTTGGCGAGGGCTGCTTCGGGCAGGTGGTGTTGGCTG 1480
Query 248 AGGCTATCGGGCTGGACAAGGACAAACCCAACCGTGTGACCAAAGTGGCTGTGAAGATGTTGAAGTCGGACGCA 321
||||.|||||||||||.||||||||||||||||||||||||||||||||.|||||||||||||||||.||||||
Sbjct 1481 AGGCCATCGGGCTGGATAAGGACAAACCCAACCGTGTGACCAAAGTGGCCGTGAAGATGTTGAAGTCCGACGCA 1554
Query 322 ACAGAGAAAGACTTGTCAGACCTGATCTCAGAAATGGAGATGATGAAGATGATCGGGAAGCATAAGAATATCAT 395
||.|||||.|||.||||.||.||||||||.||.||||||||||||||.|||||.||||||||.|||||||||||
Sbjct 1555 ACGGAGAAGGACCTGTCGGATCTGATCTCGGAGATGGAGATGATGAAAATGATTGGGAAGCACAAGAATATCAT 1628
Query 396 CAACCTGCTGGGGGCCTGCACGCAGGATGGTCC-CTTGTATGTCATCGTGGAGTATGCCTCCAAGGGCAACCTG 468
||||||.|||||.||.|||||.||||||||||| ||| ||||||||.||||||||.||||||||.|||||.||.
Sbjct 1629 CAACCTTCTGGGAGCGTGCACACAGGATGGTCCTCTT-TATGTCATTGTGGAGTACGCCTCCAAAGGCAATCTC 1701
Query 469 CGGGAGTACCTGCAGGCCCGGAGGCCCCCAGGGCTGGAATACTGCTACAACCCCAGCCACAACCCAGAGGAGCA 542
||||||||.||.||||||||||||||.||.||||||||.||||||||.|||||||||||||||||.|||||.||
Sbjct 1702 CGGGAGTATCTACAGGCCCGGAGGCCTCCTGGGCTGGAGTACTGCTATAACCCCAGCCACAACCCCGAGGAACA 1775
Query 543 GCTCTCCTCCAAGGACCTGGTGTCCTGCGCCTACCAGGTGGCCCGAGGCATGGAGTATCTGGCCTCCAAGAAGT 616
|||.||.|||||.||.|||||.|||||.|||||.||||||||.||.||||||||||||||.|||||.|||||||
Sbjct 1776 GCTGTCTTCCAAAGATCTGGTATCCTGTGCCTATCAGGTGGCTCGGGGCATGGAGTATCTTGCCTCTAAGAAGT 1849
Query 617 GCATACACCGAGACCTGGCAGCCAGGAATGTCCTGGTGACAGAGGACAATGTGATGAAGATAGCAGACTTTGGC 690
|.|||||||||||||||||.||.|||||.|||||||||||.|||||.||.||.||||||||.||||||||||||
Sbjct 1850 GTATACACCGAGACCTGGCTGCTAGGAACGTCCTGGTGACCGAGGATAACGTAATGAAGATCGCAGACTTTGGC 1923
Query 691 CTCGCACGGGACATTCACCACATCGACTACTATAAAAAGACAACCAACGGCCGACTGCCTGTGAAGTGGATGGC 764
.|.||.||.||||||||.||.|||||||||||.||.||.||.|||||||||||.||||||||||||||||||||
Sbjct 1924 TTAGCTCGAGACATTCATCATATCGACTACTACAAGAAAACCACCAACGGCCGGCTGCCTGTGAAGTGGATGGC 1997
Query 765 ACCCGAGGCATTATTTGACCGGATCTACACCCACCAGAGTGATGTGTGGTCTTTCGGGGTGCTCCTGTGGGAGA 838
.||.|||||.||.|||||||||||||||||.||||||||.||||||||||||||.||.||||||.|||||||||
Sbjct 1998 CCCTGAGGCGTTGTTTGACCGGATCTACACACACCAGAGCGATGTGTGGTCTTTTGGAGTGCTCTTGTGGGAGA 2071
Query 839 TCTTCACTCTGGGCGGCTCCCCATACCCCGGTGTGCCTGTGGAGGAACTTTTCAAGCTGCTGAAGGAGGGTCAC 912
|||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 2072 TCTTCACTCTGGGTGGCTCCCCATACCCCGGTGTGCCTGTGGAGGAACTTTTCAAGCTGCTGAAGGAGGGTCAT 2145
Query 913 CGCATGGACAAGCCCAGTAACTGCACCAACGAGCTGTACATGATGATGCGGGACTGCTGGCATGCAGTGCCCTC 986
||.||||||||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2146 CGAATGGACAAGCCCAGTAACTGTACCAATGAGCTGTACATGATGATGCGGGACTGCTGGCATGCAGTGCCCTC 2219
Query 987 ACAGAGACCCACCTTCAAGCAGCTGGTGGAAGACCTGGACCGCATCGTGGCCTTGACCTCCAACCAGGAGTACC 1060
.||||||||.||.|||||||||.||||||||||||||||||||||.||||||||||||||||||||||||||.|
Sbjct 2220 TCAGAGACCTACGTTCAAGCAGTTGGTGGAAGACCTGGACCGCATTGTGGCCTTGACCTCCAACCAGGAGTATC 2293
Query 1061 TGGACCTGTCCATGCCCCTGGACCAGTACTCCCCCAGCTTTCCCGACACCCGGAGCTCTACGTGCTCCTCAGGG 1134
|||||||||||||.||.||||||||||||||.|||||||||||||||||.||||||||.||.||||||||||||
Sbjct 2294 TGGACCTGTCCATACCGCTGGACCAGTACTCACCCAGCTTTCCCGACACACGGAGCTCCACCTGCTCCTCAGGG 2367
Query 1135 GAGGATTCCGTCTTCTCTCATGAGCCGCTGCCCGAGGAGCCCTGCCTGCCCCGACACCCAGCCCAGCTTGCCAA 1208
|||||.||.||||||||||||||||||.|.||.|||||||||||.|||||.||||||||..|||||||||||||
Sbjct 2368 GAGGACTCTGTCTTCTCTCATGAGCCGTTACCTGAGGAGCCCTGTCTGCCTCGACACCCCACCCAGCTTGCCAA 2441
Query 1209 TGGCGGACTCAAACGCCGC 1227
..|.|||||||||||.|||
Sbjct 2442 CAGTGGACTCAAACGGCGC 2460
