Nucleotide Global Alignment
Description
- Query:
- TRCN0000487873
- Subject:
- XM_017023275.2
- Aligned Length:
- 1829
- Identities:
- 1240
- Gaps:
- 571
Alignment
Query 1 ------------------------------------------------------------ATG-GCC--AGGAC 11
.|| ||| |||||
Sbjct 1 ATGTTGAAGATGTGGGTTAGTGAAATTGAGACCTGGCGCTTCCTGAGGCTGGCAGCCCGGTTGAGCCTGAGGAC 74
Query 12 CA---------------CCAGCCAGC------------------------TGTATGACGCCGTGCCCATCCAGT 46
|| .|||.|.|| .|||||||||||||||||||||||
Sbjct 75 CAGACTTGAGGCAGTTGGCAGTCCGCGCCTCGTTGCCCTCTGTCTGCCCTGGTATGACGCCGTGCCCATCCAGT 148
Query 47 CCAGCGTGGTGTTATGTTCCTGCCCATCCCCATCAATGGTGAGGACCCAGACTGAGTCCAGCACGCCCCCTGGC 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCAGCGTGGTGTTATGTTCCTGCCCATCCCCATCAATGGTGAGGACCCAGACTGAGTCCAGCACGCCCCCTGGC 222
Query 121 ATTCCTGGTGGCAGCAGGCAGGGCCCCGCCATGGACGGCACTGCAGCCGAGCCTCGGCCCGGCGCCGGCTCCCT 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ATTCCTGGTGGCAGCAGGCAGGGCCCCGCCATGGACGGCACTGCAGCCGAGCCTCGGCCCGGCGCCGGCTCCCT 296
Query 195 GCAGCATGCCCAGCCTCCGCCGCAGCCTCGGAAGAAGCGGCCTGAGGACTTCAAGTTTGGGAAAATCCTTGGGG 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GCAGCATGCCCAGCCTCCGCCGCAGCCTCGGAAGAAGCGGCCTGAGGACTTCAAGTTTGGGAAAATCCTTGGGG 370
Query 269 AAGGCTCTTTTTCCACGGTTGTCCTGGCTCGAGAACTGGCAACCTCCAGAGAATATGCGATTAAAATTCTGGAG 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAGGCTCTTTTTCCACGGTTGTCCTGGCTCGAGAACTGGCAACCTCCAGAGAATATGCGA-------------- 430
Query 343 AAGCGACATATCATAAAAGAGAACAAGGTCCCCTATGTAACCAGAGAGCGGGATGTCATGTCGCGCCTGGATCA 416
Sbjct 431 -------------------------------------------------------------------------- 430
Query 417 CCCCTTCTTTGTTAAGCTTTACTTCACATTTCAGGACGACGAGAAGCTGTATTTCGGCCTTAGTTATGCCAAAA 490
Sbjct 431 -------------------------------------------------------------------------- 430
Query 491 ATGGAGAACTACTTAAATATATTCGCAAAATCGGTTCATTCGATGAGACCTGTACCCGATTTTACACGGCTGAG 564
Sbjct 431 -------------------------------------------------------------------------- 430
Query 565 ATTGTGTCTGCTTTAGAGTACTTGCACGGCAAGGGCATCATTCACAGGGACCTTAAACCGGAAAACATTTTGTT 638
Sbjct 431 -------------------------------------------------------------------------- 430
Query 639 AAATGAAGATATGCACATCCAGATCACAGATTTTGGAACAGCAAAAGTCTTATCCCCAGAGAGCAAACAAGCCA 712
|||
Sbjct 431 -----------------------------------------------------------------------CCA 433
Query 713 GGGCCAACTCATTCGTGGGAACAGCGCAGTACGTTTCTCCAGAGCTGCTCACGGAGAAGTCCGCCTGTAAGAGT 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 434 GGGCCAACTCATTCGTGGGAACAGCGCAGTACGTTTCTCCAGAGCTGCTCACGGAGAAGTCCGCCTGTAAGAGT 507
Query 787 TCAGACCTTTGGGCTCTTGGATGCATAATATACCAGCTTGTGGCAGGACTCCCACCATTCCGAGCTGGAAACGA 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 508 TCAGACCTTTGGGCTCTTGGATGCATAATATACCAGCTTGTGGCAGGACTCCCACCATTCCGAGCTGGAAACGA 581
Query 861 GTATCTTATATTTCAGAAGATCATTAAGTTGGAATATGACTTTCCAGAAAAATTCTTCCCTAAGGCAAGAGACC 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 582 GTATCTTATATTTCAGAAGATCATTAAGTTGGAATATGACTTTCCAGAAAAATTCTTCCCTAAGGCAAGAGACC 655
Query 935 TCGTGGAGAAACTTTTGGTTTTAGATGCCACAAAGCGGTTAGGCTGTGAGGAAATGGAAGGATACGGACCTCTT 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 656 TCGTGGAGAAACTTTTGGTTTTAGATGCCACAAAGCGGTTAGGCTGTGAGGAAATGGAAGGATACGGACCTCTT 729
Query 1009 AAAGCACACCCGTTCTTCGAGTCCGTCACGTGGGAGAACCTGCACCAGCAGACGCCTCCGAAGCTCACCGCTTA 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 730 AAAGCACACCCGTTCTTCGAGTCCGTCACGTGGGAGAACCTGCACCAGCAGACGCCTCCGAAGCTCACCGCTTA 803
Query 1083 CCTGCCGGCTATGTCGGAAGACGACGAGGACTGCTATGGCAATTATGACAATCTCCTGAGCCAGTTTGGCTGCA 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 804 CCTGCCGGCTATGTCGGAAGACGACGAGGACTGCTATGGCAATTATGACAATCTCCTGAGCCAGTTTGGCTGCA 877
Query 1157 TGCAGGTGTCTTCGTCCTCCTCCTCACACTCCCTGTCAGCCTCCGACACGGGCCTGCCCCAGAGGTCAGGCAGC 1230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 878 TGCAGGTGTCTTCGTCCTCCTCCTCACACTCCCTGTCAGCCTCCGACACGGGCCTGCCCCAGAGGTCAGGCAGC 951
Query 1231 AACATAGAGCAGTACATTCACGATCTGGACTCGAACTCCTTTGAACTGGACTTACAGTTTTCCGAAGATGAGAA 1304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 952 AACATAGAGCAGTACATTCACGATCTGGACTCGAACTCCTTTGAACTGGACTTACAGTTTTCCGAAGATGAGAA 1025
Query 1305 GAGGTTGTTGTTGGAGAAGCAGGCTGGCGGAAACCCTTGGCACCAGTTTGTAGAAAATAATTTAATACTAAAGA 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1026 GAGGTTGTTGTTGGAGAAGCAGGCTGGCGGAAACCCTTGGCACCAGTTTGTAGAAAATAATTTAATACTAAAGA 1099
Query 1379 TGGGCCCAGTGGATAAGCGGAAGGGTTTATTTGCAAGACGACGACAGCTGTTGCTCACAGAAGGACCACATTTA 1452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1100 TGGGCCCAGTGGATAAGCGGAAGGGTTTATTTGCAAGACGACGACAGCTGTTGCTCACAGAAGGACCACATTTA 1173
Query 1453 TATTATGTGGATCCTGTCAACAAAGTTCTGAAAGGTGAAATTCCTTGGTCACAAGAACTTCGACCAGAGGCCAA 1526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1174 TATTATGTGGATCCTGTCAACAAAGTTCTGAAAGGTGAAATTCCTTGGTCACAAGAACTTCGACCAGAGGCCAA 1247
Query 1527 GAATTTTAAAACTTTCTTTGTCCACACG-----------CCTAACAGGACGTATTATCTG-----------ATG 1578
|||||||||||||||||||||||||||| || ||| |.||| |||| |||
Sbjct 1248 GAATTTTAAAACTTTCTTTGTCCACACGGTGAGTCTGTTCC---CAG---GGATT-TCTGTGTGCAGGGTAATG 1314
Query 1579 G-----------ACCCCAGCGGGAACGCA--CACAAG---TGGTGC---AGGAAGATCCAG-GAGGTTTGGAGG 1632
| |||.| |.||||| ||| ||||.| || || |||.|| ||| |.||.|.|| ||
Sbjct 1315 GGAGGGCTTTGCACCAC-GTGGGAA-GCAGCCACAGGCCTTG--GCCAGAGGGAG---CAGCGGGGATCGG-GG 1380
Query 1633 CAGC-----------------GATACCAGAGCCACCCGGACGCCGCTGTGCAG 1668
|||| .||.||||| |.|||..||
Sbjct 1381 CAGCTGCCTCGCCCTTTCCGACATCCCAGA--CGCCCACAC------------ 1419
