Nucleotide Global Alignment

Description

Query:
TRCN0000487955
Subject:
XM_006526358.3
Aligned Length:
2853
Identities:
2368
Gaps:
255

Alignment

Query    1  ATGGCGACGGGAACGGGCAAACACAAGCTGCTAAGCACTGGCCCCACAGAGCCATGGTCCATCCGAGAGAAGCT  74
            ||||||||.||.||.|||||.|||||||||||.||.||||||||.|||||||||||||||||||||||||||.|
Sbjct    1  ATGGCGACCGGGACAGGCAAGCACAAGCTGCTGAGTACTGGCCCAACAGAGCCATGGTCCATCCGAGAGAAGTT  74

Query   75  ATGTTTAGCATCTTCTGTCATGAGAAGTGGCGATCAAAATTGGGTATCAGTTAGCAGAGCAATCAAGCCCTTTG  148
            .|||||||||||||||||||||||.|||||.|||||.||.||||||||||||||||||||||||||||||||||
Sbjct   75  GTGTTTAGCATCTTCTGTCATGAGGAGTGGGGATCAGAACTGGGTATCAGTTAGCAGAGCAATCAAGCCCTTTG  148

Query  149  CAGAACCTGGCCGCCCTCCAGACTGGTTCTCTCAAAAACATTGTGCTTCCCAGTACTCGGAGCTTTTAGAGACC  222
            |||||||||||||.|||||||||||||||||||||||||||||||||||.|||||.||.|||||.||||||||.
Sbjct  149  CAGAACCTGGCCGGCCTCCAGACTGGTTCTCTCAAAAACATTGTGCTTCTCAGTATTCTGAGCTCTTAGAGACT  222

Query  223  ACTGAGACACCAAAACGGAAACGAGGTGAAAAGGGAGAAGTGGTGGAAACTGTTGAAGATGTTATTGTTCGGAA  296
            ||||||||.||||||||||||||.||||||||.|||||||||||.||||||||||||||||||||||||||.||
Sbjct  223  ACTGAGACTCCAAAACGGAAACGGGGTGAAAAAGGAGAAGTGGTAGAAACTGTTGAAGATGTTATTGTTCGCAA  296

Query  297  ATTGACTGCTGAGCGAGTTGAAGAACTAAAGAAAGTGATAAAGGAAACCCAGGAGAGATATAGACGGCTAAAGA  370
            |.|||||||||||.|||||||||||||.||||||||.||||||||.||.|||||||||||.||.||.||.||.|
Sbjct  297  ACTGACTGCTGAGAGAGTTGAAGAACTGAAGAAAGTCATAAAGGAGACACAGGAGAGATACAGGCGTCTGAAAA  370

Query  371  GAGATGCAGAACTAATTCAAGCTGGACACATGGACAGCAGACTGGATGAGCTTTGCAATGACATTGCAACGAAA  444
            ||||||||||||||||.|||||.||.||||||||||||||||||||||||||.||||||||||||||||.||||
Sbjct  371  GAGATGCAGAACTAATCCAAGCCGGGCACATGGACAGCAGACTGGATGAGCTCTGCAATGACATTGCAATGAAA  444

Query  445  AAGAAATTGGAAGAAGAGGAGGCTGAAGTAAAGAGGAAGGCTACAGATGCTGCATACCAGGCTCGTCAAGCAGT  518
            ||||||||||||||.||.||||||||||||||.||||||||.||.||||||||.||||||||.||.||||||||
Sbjct  445  AAGAAATTGGAAGAGGAAGAGGCTGAAGTAAAAAGGAAGGCCACCGATGCTGCGTACCAGGCGCGACAAGCAGT  518

Query  519  AAAAACACCCCCCCGGAGGTTACCCACTGTGATGGTTCGCTCTCCTATAGATTCTGCCTCCCCAGGAGGTGATT  592
            .|||||.||.||.||.||||||||.|||||||||||.|||||||||.||||.||||||||||||||||||||||
Sbjct  519  GAAAACGCCTCCTCGAAGGTTACCGACTGTGATGGTCCGCTCTCCTGTAGACTCTGCCTCCCCAGGAGGTGATT  592

Query  593  ATCCACTTGGGGACTTGACTCCAACCACTATGGAAGAGGCTACCTCTGGGGTAACCCCCGGGACTTTGCCGAGT  666
            |.||||||||.|||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct  593  ACCCACTTGGAGACTTGACTCCAACCACTATGGAAGAGGCTACCTCTGGGGTAACCCCTGGGACTTTGCCGAGT  666

Query  667  ACCCCAGTCACCTCGTTTCCTGGGATTCCTGACACCCTTCCTCCAGGCTCTGCACCCTTAGAAGCCCCCATGAC  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ACCCCAGTCACCTCGTTTCCTGGGATTCCTGACACCCTTCCTCCAGGCTCTGCACCCTTAGAAGCCCCCATGAC  740

Query  741  CCCAGTAACAGATGATTCACCCCAGAAAAAGATGCTTGGACAGAAAGCAACTCCACCCCCCTCCCCTCTGCTGT  814
            ||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CCCAATAACAGATGATTCACCCCAGAAAAAGATGCTTGGACAGAAAGCAACTCCACCCCCCTCCCCTCTGCTGT  814

Query  815  CAGAGCTCTTGAAGAAGGGCAGCCTCCTGCCTACTAGCCCCAGACTGGTCAATGAGAGTGAAATGGCTGTGGCT  888
            |||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||.||||..|.
Sbjct  815  CAGAGCTCTTGAAGAAGGGCAGCCTCCTGCCTACTAGCCCCAGACTGGTGAATGAGAGTGAAATGCCTGTACCC  888

Query  889  TCTGGCCACCTGAACAGTACAGGTGTCCTCCTGGAGGTAGGCGGGGTCCTTCCCATGATACATGGTGGGGAGAT  962
            .|||||||.||||||||.|||||.||.|||.||||||||||.|||||.||||||||||||||||||||||||||
Sbjct  889  CCTGGCCATCTGAACAGCACAGGGGTTCTCTTGGAGGTAGGAGGGGTTCTTCCCATGATACATGGTGGGGAGAT  962

Query  963  ACAGCAAACACCCAATACTGTTGCAGCCTCCCCTGCTGCATCAGGTGCTCCCACTCTTTCCCGGCTTTTAGAAG  1036
            |||||.||||.|||.|.||||.||.||||||||.|||||.|                                 
Sbjct  963  ACAGCCAACAACCAGTGCTGTGGCGGCCTCCCCGGCTGCCT---------------------------------  1003

Query 1037  CTGGTCCTACACAGTTCACCACACCTCTTGCTTCCTTCACTACTGTTGCCAGTGAGCCTCCAGTTAAACTTGTG  1110
                                                             |||||||||                
Sbjct 1004  -------------------------------------------------CAGTGAGCC----------------  1012

Query 1111  CCACCCCCTGTAGAGTCTGTGTCCCAAGCTACCATTGTCATGATGCCTGCGCTGCCAGCACCATCCTCTGCTCC  1184
                                                       .|||||.||                      
Sbjct 1013  -------------------------------------------AGCCTGAGC----------------------  1021

Query 1185  GGCTGTCTCCACTACTGAAAGTGTAGCTCCAGTGAGTCAACCCGACAACTGTGTTCCCATGGAGGCTGTGGGGG  1258
                                                           .||||||.|||.||||.||||||||||
Sbjct 1022  -----------------------------------------------CCTGTGTACCCCTGGAAGCTGTGGGGG  1048

Query 1259  ATCCACATACTGTGACTGTTTCCATGGACAGCAGTGAAATATCCATGATCATCAATTCTATCAAAGAAGAGTGT  1332
            ||||||||||||||||||||||||||||.||||.||||||.|||||||||||.|||||.|||||||||||||||
Sbjct 1049  ATCCACATACTGTGACTGTTTCCATGGATAGCAATGAAATCTCCATGATCATTAATTCCATCAAAGAAGAGTGT  1122

Query 1333  TTTCGATCAGGGGTAGCAGAGGCTCCTGTTGGATCAAAGGCTCCCAGCATAGATGGGAAGGAAGAATTAGATCT  1406
            ||.||.||||||||||||||||||||||.|||||||||||||||.||||||||||||||||||||.||.|||||
Sbjct 1123  TTCCGCTCAGGGGTAGCAGAGGCTCCTGGTGGATCAAAGGCTCCAAGCATAGATGGGAAGGAAGACTTGGATCT  1196

Query 1407  GGCTGAGAAGATGGATATTGCTGTGTCTTACACAGGTGAAGAGCTGGATTTTGAGACTGTTGGAGACATCATTG  1480
            .||.|||||||||||||||||||||||||||||||||||||||.||||.|||||.||.||||||||||||||||
Sbjct 1197  AGCGGAGAAGATGGATATTGCTGTGTCTTACACAGGTGAAGAGTTGGACTTTGAAACAGTTGGAGACATCATTG  1270

Query 1481  CCATCATTGAGGACAAGGTAGATGATCATCCTGAAGTGCTGGATGTGGCAGCAGTGGAAGCAGCACTGTCATTT  1554
            |||||||||||||||||||.||||||||.|||||||||||||||||||||||.||.|||||.||..|.||.||.
Sbjct 1271  CCATCATTGAGGACAAGGTGGATGATCACCCTGAAGTGCTGGATGTGGCAGCGGTAGAAGCGGCGTTATCGTTC  1344

Query 1555  TGTGAAGAAAATGATGATCCTCAGTCCCTGCCTGGCCCCTGGGAGCATCCTATCCAGCAGGAGCGGGACAAGCC  1628
            ||||||||.||||||||.|||||||||||||||||||||||||||||.|||||||||||||||||.||||||||
Sbjct 1345  TGTGAAGAGAATGATGACCCTCAGTCCCTGCCTGGCCCCTGGGAGCACCCTATCCAGCAGGAGCGCGACAAGCC  1418

Query 1629  AGTACCTCTCCCTGCACCAGAAATGACGGTCAAGCAAGAGAGACTGGACTTTGAGGAAACGGAAAACAAGGGAA  1702
            |||||||||.||.||||||||.|||||.|||||.||||||||.||.|||||.||||||.|.||||||||.||..
Sbjct 1419  AGTACCTCTGCCAGCACCAGAGATGACAGTCAAACAAGAGAGGCTAGACTTCGAGGAATCAGAAAACAAAGGGC  1492

Query 1703  TACATGAACTGGTGGACATCAGGGAGCCCAGTGCAGAGATCAAGGTGGAACCTGCAGAACCAGAGCCAGTCATT  1776
            |.|||||.|||||||||||||||||..||.|||..|||||.|||||||||||..||||.||||||||||.|||.
Sbjct 1493  TCCATGACCTGGTGGACATCAGGGATTCCGGTGTTGAGATTAAGGTGGAACCCACAGAGCCAGAGCCAGGCATG  1566

Query 1777  TCAGGAGCCGAAATAGTAGCTGGAGTTGTTCCAGCCACAAGTATGGAGCCACCAGAACTCAGGAGTCAGGACTT  1850
            ||.||.||.||.||||||||||||||||.|||||...|||||||||||||||||||||||||||||||.||||.
Sbjct 1567  TCTGGGGCTGAGATAGTAGCTGGAGTTGGTCCAGTTCCAAGTATGGAGCCACCAGAACTCAGGAGTCAAGACTC  1640

Query 1851  AGATGAGGAACTGGGAAGTACTGCAGCTGGAGAGATTGTTGAAGCAGATGTTGCCATTGGGAAAGGCGATGAGA  1924
            ||||||.||||...|||||.|||||||||||||.||||.|||.|||||||.|.|||.|||||||||||||||||
Sbjct 1641  AGATGAAGAACCTAGAAGTTCTGCAGCTGGAGACATTGGTGAGGCAGATGGTTCCAGTGGGAAAGGCGATGAGA  1714

Query 1925  CTCCACTTACAAATGTGAAGACAGAGGCATCCCCTGAAAGCATGTTGTCTCCATCACATGGCTCAAATCCCATT  1998
            ..||||||.||..||||||||||||||||||||||||.|||||||||||||||||||||||||||||||..|||
Sbjct 1715  GGCCACTTTCAGCTGTGAAGACAGAGGCATCCCCTGAGAGCATGTTGTCTCCATCACATGGCTCAAATCTTATT  1788

Query 1999  GAAGATCCTTTAGAGGCAGAGACTCAGCACAAGTTTGAAATGTCAGACTCATTGAAAGAAGAATCAGGGACTAT  2072
            ||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1789  GAAGATCCTTTAGAGGCAGAGACTCAACACAAGTTTGAAATGTCAGACTCATTGAAAGAAGAATCAGGGACTAT  1862

Query 2073  TTTTGGAAGCCAGATAAAGGATGCCCCAGGTGAGGATGAGGAGGAAGATGGTGTCAGTGAAGCGGCCAGCCTAG  2146
            |||||||||||||||||||||||||||||||||.||||||||.||||||||.|||||||||||.||.|||||||
Sbjct 1863  TTTTGGAAGCCAGATAAAGGATGCCCCAGGTGACGATGAGGAAGAAGATGGAGTCAGTGAAGCAGCTAGCCTAG  1936

Query 2147  AGGAGCCTAAGGAAGAGGATCAAGGAGAAGGCTACTTGTCAGAAATGGATAATGAACCTCCTGTGAGCGAGAGT  2220
            ||||||||||||||||||||||||||||||||||.|||||.||.|||||||||||.||.||||||||.||||||
Sbjct 1937  AGGAGCCTAAGGAAGAGGATCAAGGAGAAGGCTATTTGTCTGAGATGGATAATGAGCCCCCTGTGAGTGAGAGT  2010

Query 2221  GATGATGGCTTCAGCATACACAATGCTACACTGCAGTCACACACACTGGCAGACTCCATCCCCAGCAGCCCTGC  2294
            |||||||||||.||.|||||.||.||.|||||||||||||||||.|||||||||||||||||.|||||||||||
Sbjct 2011  GATGATGGCTTTAGTATACATAACGCCACACTGCAGTCACACACTCTGGCAGACTCCATCCCAAGCAGCCCTGC  2084

Query 2295  TTCTTCACAGTTCTCTGTCTGTAGTGAGGATCAGGAAGCTATTCAGGCACAGAAAATTTGGAAGAAAGCCATCA  2368
            .||.||.|||||.||.||.||.|||||.|||||.|||||.||||||||.||||||||.||||||||||||||||
Sbjct 2085  CTCCTCCCAGTTTTCCGTGTGCAGTGAAGATCAAGAAGCAATTCAGGCTCAGAAAATATGGAAGAAAGCCATCA  2158

Query 2369  TGCTTGTATGGAGAGCTGCAGCTAATCATAGGTATGCCAATGTCTTCCTGCAGCCTGTTACAGATGACATAGCA  2442
            |||||||||||||.||||||||.||||||||||||||||||||.||||||||.||||||||||||||||||||.
Sbjct 2159  TGCTTGTATGGAGGGCTGCAGCAAATCATAGGTATGCCAATGTGTTCCTGCAACCTGTTACAGATGACATAGCT  2232

Query 2443  CCTGGCTACCACAGCATTGTGCAGAGGCCTATGGATTTGTCAACTATTAAGAAAAACATAGAAAATGGACTGAT  2516
            |||||.|||||.||||||||.||||||||||||||||||||||||||.|||||||||||.||||||||||||||
Sbjct 2233  CCTGGTTACCATAGCATTGTACAGAGGCCTATGGATTTGTCAACTATAAAGAAAAACATTGAAAATGGACTGAT  2306

Query 2517  CCGAAGCACAGCTGAATTTCAGCGTGACATTATGCTGATGTTTCAGAATGCTGTAATGTACAATAGCTCAGACC  2590
            |||||||||||||||.||||||||||||||.|||||||||||||||||||||||.|||||||||||||||||||
Sbjct 2307  CCGAAGCACAGCTGAGTTTCAGCGTGACATCATGCTGATGTTTCAGAATGCTGTTATGTACAATAGCTCAGACC  2380

Query 2591  ATGATGTCTATCACATGGCAGTGGAGATGCAGCGAGATGTCTTGGAACAGATCCAGCAATTCTTGGCCACGCAG  2664
            ||||||||||||||||||||||.|||||||||.|||||||||||||||||||||||||||||||||||||.|||
Sbjct 2381  ATGATGTCTATCACATGGCAGTAGAGATGCAGAGAGATGTCTTGGAACAGATCCAGCAATTCTTGGCCACACAG  2454

Query 2665  TTGATTATGCAAACATCCGAGTCTGGGATCAGTGCTAAAAGTCTTCGAGGGAGAGATTCTACCCGCAAACAGGA  2738
            |||||||||||||||||.||||||||.|||||||||||||||||.||.||||||||.||||||||.|||||.||
Sbjct 2455  TTGATTATGCAAACATCTGAGTCTGGAATCAGTGCTAAAAGTCTCCGGGGGAGAGACTCTACCCGAAAACAAGA  2528

Query 2739  TGCTTCAGAGAAGGACAGTGTCCCAATGGGCTCTCCTGCCTTCCTTCTCTCTCTCTTTGATGGAGGAACCAGGG  2812
            |||||||||||||                                             |||||.||||||||||
Sbjct 2529  TGCTTCAGAGAAG---------------------------------------------GATGGGGGAACCAGGG  2557

Query 2813  GACGCCGCTGTGCCATTGAAGCAGATATGAAGATGAAAAAG  2853
            |||||||||||||||||||||||||||||||||||||.|||
Sbjct 2558  GACGCCGCTGTGCCATTGAAGCAGATATGAAGATGAAGAAG  2598

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