Nucleotide Global Alignment
Description
- Query:
- TRCN0000487983
- Subject:
- XM_006499510.3
- Aligned Length:
- 2210
- Identities:
- 1219
- Gaps:
- 871
Alignment
Query 1 ---------------------------------------------------ATGTTTGGGAAGAAAAAGAAAAA 23
|||||||||||||||||||||||
Sbjct 1 ATGAGGTACCGCGACTTCTCTGCTGACAGCCAGCCACCAGGTTTTTACATCATGTTTGGGAAGAAAAAGAAAAA 74
Query 24 GATTGAAATATCTGGCCCGTCCAACTTTGAACACAGGGTTCATACTGGGTTTGATCCACAAGAGCAGAAGTTTA 97
|||.||||||||||||||.|||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 75 GATCGAAATATCTGGCCCATCCAACTTTGAACACAGGGTTCATACTGGATTTGATCCACAAGAGCAGAAGTTTA 148
Query 98 CCGGCCTTCCCCAGCAGTGGCACAGCCTGTTAGCAGATACGGCCAACAGGCCAAAGCCTATGGTGGACCCTTCA 171
|.|||||||||||||||||||||||||||||||||||.||.|||||||||||.|||||.|||||||||||.|||
Sbjct 149 CTGGCCTTCCCCAGCAGTGGCACAGCCTGTTAGCAGACACAGCCAACAGGCCCAAGCCCATGGTGGACCCATCA 222
Query 172 TGCATCACACCCATCCAGCTGGCTCCTATGAAGACAATCGTTAGAGGAAACAAACCCTGCAAGGAAACCTCCAT 245
||||||||||||||.|||||||||||.|||
Sbjct 223 TGCATCACACCCATACAGCTGGCTCCCATG-------------------------------------------- 252
Query 246 CAACGGCCTGCTAGAGGATTTTGACAACATCTCGGTGACTCGCTCCAACTCCCTAAGGAAAGAAAGCCCACCCA 319
Sbjct 253 -------------------------------------------------------------------------- 252
Query 320 CCCCAGATCAGGGAGCCTCCAGCCACGGTCCAGGCCACGCGGAAGAAAATGGCTTCATCACCTTCTCCCAGTAT 393
Sbjct 253 -------------------------------------------------------------------------- 252
Query 394 TCCAGCGAATCCGATACTACTGCTGACTACACGACCGAAAAGTACAGGGAGAAGAGTCTCTATGGAGATGATCT 467
Sbjct 253 -------------------------------------------------------------------------- 252
Query 468 GGATCCGTATTATAGAGGCAGCCACGCAGCCAAGCAAAATGGGCACGTAATGAAAATGAAGCACGGGGAGGCCT 541
Sbjct 253 -------------------------------------------------------------------------- 252
Query 542 ACTATTCTGAGGTGAAGCCTTTGAAATCCGATTTTGCCAGATTTTCTGCCGATTATCACTCACATTTGGACTCA 615
Sbjct 253 -------------------------------------------------------------------------- 252
Query 616 CTGAGCAAACCAAGTGAATACAGTGACCTCAAGTGGGAGTATCAGAGAGCCTCGAGTAGCTCCCCTCTGGATTA 689
Sbjct 253 -------------------------------------------------------------------------- 252
Query 690 TTCATTCCAATTCACACCTTCTAGAACTGCAGGGACCAGCGGGTGCTCCAAGGAGAGCCTGGCGTACAGTGAAA 763
Sbjct 253 -------------------------------------------------------------------------- 252
Query 764 GTGAATGGGGACCCAGCCTGGATGACTATGACAGGAGGCCAAAGTCTTCGTACCTGAATCAGACAAGCCCTCAG 837
Sbjct 253 -------------------------------------------------------------------------- 252
Query 838 CCCACCATGCGGCAGAGGTCCAGGTCAGGCTCGGGACTCCAGGAACCGATGATGCCATTTGGAGCAAGTGCATT 911
Sbjct 253 -------------------------------------------------------------------------- 252
Query 912 TAAAACCCATCCCCAAGGACACTCCTACAACTCCTACACCTACCCTCGCTTGTCCGAGCCCACAATGTGCATTC 985
Sbjct 253 -------------------------------------------------------------------------- 252
Query 986 CAAAGGTGGATTACGATCGAGCACAGATGGTCCTCAGCCCTCCACTGTCAGGGTCTGACACCTACCCCAGGGGC 1059
||||||||||||||||||||||||||||||.||||.|||||||||||||||||.|||||.||||||||.|||
Sbjct 253 --AAGGTGGATTACGATCGAGCACAGATGGTCTTCAGTCCTCCACTGTCAGGGTCCGACACTTACCCCAGAGGC 324
Query 1060 CCTGCCAAACTACCTCAAAGTCAAAGCAAATCGGGCTATTCCTCAAGCAGTCACCAGTACCCGTCTGGGTACCA 1133
||..||||||||||||||||||||||||||.|.|||||.||.|||.||||.|||||||||||.|||||||||||
Sbjct 325 CCCACCAAACTACCTCAAAGTCAAAGCAAAGCAGGCTACTCTTCAGGCAGCCACCAGTACCCTTCTGGGTACCA 398
Query 1134 CAAAGCCACCT-TGTACCATCACCCCTCCCTGCAGAGCAGTTCGCAGTACATCTCCACGGCTTCCTACCTGAGC 1206
||||| ||.|| |.|||||.||.||.||||||||.|.||||||.||||||||||||||.|||||.|||.|.|||
Sbjct 399 CAAAG-CATCTCTATACCACCATCCATCCCTGCAAACCAGTTCTCAGTACATCTCCACCGCTTCTTACTTAAGC 471
Query 1207 TCCCTCAGCCTCTCATCCAGCACCTACCCGCCGCCCAGCTGGGGCTCCTCCTCCGACCAGCAGCCCTCCAGGGT 1280
||.|||||..||||.||.|||||||||||.||.||.|||||||||||||||||.||||||||||||||.|||||
Sbjct 472 TCTCTCAGTATCTCCTCGAGCACCTACCCTCCACCTAGCTGGGGCTCCTCCTCAGACCAGCAGCCCTCAAGGGT 545
Query 1281 GTCCCATGAACAGTTTCGGGCGGCCCTGCAGCTGGTGGTCAGCCCAGGAGACCCCAGGGAATACTTGGCCAACT 1354
.|||||||||||.||.||.||.||||||||.||||||||||||||||||||||||||||||||.||||..||||
Sbjct 546 ATCCCATGAACAATTCCGAGCTGCCCTGCAACTGGTGGTCAGCCCAGGAGACCCCAGGGAATATTTGGATAACT 619
Query 1355 TTATCAAAATCGGGGAAGGCTCAACCGGCATCGTATGCATCGCCACCGAGAAACACACAGGGAAACAAGTTGCA 1428
||||.||||||||.|||||.||.||.||||||||.|||||.||.||.||||||||||||||.||.|||||.|||
Sbjct 620 TTATTAAAATCGGAGAAGGGTCGACAGGCATCGTGTGCATTGCAACAGAGAAACACACAGGCAAGCAAGTGGCA 693
Query 1429 GTGAAGAAAATGGACCTCCGGAAGCAACAGAGACGAGAACTGCTTTTCAATGAGGTCGTGATCATGCGGGATTA 1502
||||||||||||||||||||.|||||.||||||||.|||||.|||||.||||||||||||||.|||||.|||||
Sbjct 694 GTGAAGAAAATGGACCTCCGAAAGCAGCAGAGACGGGAACTCCTTTTTAATGAGGTCGTGATAATGCGTGATTA 767
Query 1503 CCACCATGACAATGTGGTTGACATGTACAACAGCTACCTTGTCGGCGATGAGCTCTGGGTGGTCATGGAGTTTC 1576
||||||||||||.||.||||||||||||||||||||||||||.||.||||||||||||||||||||||||||||
Sbjct 768 CCACCATGACAACGTAGTTGACATGTACAACAGCTACCTTGTTGGAGATGAGCTCTGGGTGGTCATGGAGTTTC 841
Query 1577 TAGAAGGTGGTGCCTTGACAGACATTGTGACTCACACCAGAATGAATGAAGAACAGATAGCTACTGTCTGCCTG 1650
||||||||||||||||||||||||||||.|||||.|||||||||||||||||.|||||||||||||||||||||
Sbjct 842 TAGAAGGTGGTGCCTTGACAGACATTGTCACTCATACCAGAATGAATGAAGAGCAGATAGCTACTGTCTGCCTG 915
Query 1651 TCAGTTCTGAGAGCTCTCTCCTACCTTCATAACCAAGGAGTGATTCACAGGGACATAAAAAGTGACTCCATCCT 1724
||||||||||.||||||.|||||||||||||||||||||||||||||||||||||||||.|||||||||||.||
Sbjct 916 TCAGTTCTGAAAGCTCTGTCCTACCTTCATAACCAAGGAGTGATTCACAGGGACATAAAGAGTGACTCCATTCT 989
Query 1725 CCTGACAAGCGATGGCCGGATAAAGTTGTCTGATTTTGGTTTCTGTGCTCAAGTTTCCAAAGAGGTGCCGAAGA 1798
.||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||.||||
Sbjct 990 TCTGACAAGCGATGGCCGGATAAAGTTATCTGACTTTGGTTTCTGTGCTCAAGTTTCCAAAGAGGTGCCAAAGA 1063
Query 1799 GGAAATCATTGGTTGGCACTCCCTACTGGATGGCCCCT------------------------------GAGGTG 1842
||||.|||.||||.||.||.||.|||||||||||.||| ||||||
Sbjct 1064 GGAAGTCACTGGTGGGTACCCCATACTGGATGGCACCTGAGGTGATTTCCAGGCTACCTTATGGGACAGAGGTG 1137
Query 1843 GACATCTGGTCCCTCGGGATCATGGTGATAGAAATGATTGATGGCGAGCCCCCCTACTTCAATGAGCCTCCCCT 1916
||||||||||||||||||||.|||||||||||.|||||||||||.|||||||||||.||||||||||||||.||
Sbjct 1138 GACATCTGGTCCCTCGGGATAATGGTGATAGAGATGATTGATGGGGAGCCCCCCTATTTCAATGAGCCTCCTCT 1211
Query 1917 CCAGGCGATGCGGAGGATCCGGGACAGTTTACCTCCAAGAGTGAAGGACCTACACAAGGTTTCTTCAGTGCTCC 1990
.|||||.|||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||..||||||
Sbjct 1212 GCAGGCCATGAGGAGGATCCGGGACAGTTTACCTCCAAGAGTGAAGGACCTACACAAGGTTTCTTCCATGCTCC 1285
Query 1991 GGGGATTCCTAGA-CTTGATGTTGGTGAGGGAGCCCTCTCAGAGAGCAACAGCCCAGGAACTCCTCGGACATCC 2063
|.||||||||||| ||| |||||||||||||||||||||||.|||||.|||||.||.||||||||.||||||||
Sbjct 1286 GAGGATTCCTAGATCTT-ATGTTGGTGAGGGAGCCCTCTCAAAGAGCCACAGCTCAAGAACTCCTTGGACATCC 1358
Query 2064 ATTCTTAAAACTAGCAGGTCCACCGTCTTGCATCGTCCCCCTCATGAGACAATACAGGCATCAC 2127
||||||||||.|.|||||||||||.||||||||.||.||.|||||||||||||||||.||||||
Sbjct 1359 ATTCTTAAAATTGGCAGGTCCACCATCTTGCATTGTTCCTCTCATGAGACAATACAGACATCAC 1422
