Nucleotide Global Alignment
Description
- Query:
- TRCN0000487999
- Subject:
- NR_103543.2
- Aligned Length:
- 2127
- Identities:
- 1011
- Gaps:
- 1095
Alignment
Query 1 ATGCCCATCATGGGCTCCTCGGTGTACATCACGGTGGAGCTGGCCATTGCTGTGCTGGCCATCCTGGGCAATGT 74
|.|||| ||| |||||||
Sbjct 1 -----------------------------------GAAGCT--------CTG----------CCTGGGC----- 16
Query 75 GCTGGTGTGCTGGG-CCGTG---TGGCTCAACAGCAACCTGCAGAACGTCACCAA-CTACTTTGTGGTGTCACT 143
|| |.||| |.||| |||..||..|||..||..||| |||| ||.||||
Sbjct 17 -CT------CAGGGACTGTGACATGGAGCAGGAGCCGCCCCCAG-------CCAAGCTGCTTT----------- 65
Query 144 GGCGGCGGCCGACATCGCAGTGGGTGTGCTCGCCATCCCCTTTGCCATCACCATCAGCACC--------GGGTT 209
|.|| |||.| ||||| |||| ||||||| ||||
Sbjct 66 --CAGC-----ACAGC---GTGGG------------CCCC--------------CAGCACCTTGGTGCGGGGT- 102
Query 210 CTGCGCTGCCTGCC-------ACGGCTGCCTCTTCATTGCCTGCTTCGTCCTGGTCCTCACGCAGAGCTCCATC 276
||.||| || |.||||| ||| ||| ||
Sbjct 103 ----GCGGCC--CCTCGGAGGAGGGCTG-----TCA----------------GGT---------GA-------- 132
Query 277 TTCAGTCTCCTGGCCATCGCCATTGACCGCTACATTGCCATCCGCATCCCGCTCCGGTACAATGGCTTGGTGAC 350
||.|||.|| |||..| |||||||||||||||||||
Sbjct 133 ---AGCCTCGTG-----------TGAGGG--------------------------GGTACAATGGCTTGGTGAC 166
Query 351 CGGCACGAGGGCTAAGGGCATCATTGCCATCTGCTGGGTGCTGTCGTTTGCCATCGGCCTGACTCCCATGCTAG 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 167 CGGCACGAGGGCTAAGGGCATCATTGCCATCTGCTGGGTGCTGTCGTTTGCCATCGGCCTGACTCCCATGCTAG 240
Query 425 GTTGGAACAACTGCGGTCAGCCAAAGGAGGGCAAGAACCACTCCCAGGGCTGCGGGGAGGGCCAAGTGGCCTGT 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 GTTGGAACAACTGCGGTCAGCCAAAGGAGGGCAAGAACCACTCCCAGGGCTGCGGGGAGGGCCAAGTGGCCTGT 314
Query 499 CTCTTTGAGGATGTGGTCCCCATGAACTACATGGTGTACTTCAACTTCTTTGCCTGTGTGCTGGTGCCCCTGCT 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 315 CTCTTTGAGGATGTGGTCCCCATGAACTACATGGTGTACTTCAACTTCTTTGCCTGTGTGCTGGTGCCCCTGCT 388
Query 573 GCTCATGCTGGGTGTCTATTTGCGGATCTTCCTGGCGGCGCGACGACAGCTGAAGCAGATGGAGAGCCAGCCTC 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 389 GCTCATGCTGGGTGTCTATTTGCGGATCTTCCTGGCGGCGCGACGACAGCTGAAGCAGATGGAGAGCCAGCCTC 462
Query 647 TGCCGGGGGAGCGGGCACGGTCCACACTGCAGAAGGAGGTCCATGCTGCCAAGTCACTGGCCATCATTGTGGGG 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 463 TGCCGGGGGAGCGGGCACGGTCCACACTGCAGAAGGAGGTCCATGCTGCCAAGTCACTGGCCATCATTGTGGGG 536
Query 721 CTCTTTGCCCTCTGCTGGCTGCCCCTACACATCATCAACTGCTTCACTTTCTTCTGCCCCGACTGCAGCCACGC 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 537 CTCTTTGCCCTCTGCTGGCTGCCCCTACACATCATCAACTGCTTCACTTTCTTCTGCCCCGACTGCAGCCACGC 610
Query 795 CCCTCTCTGGCTCATGTACCTGGCCATCGTCCTCTCCCACACCAATTCGGTTGTGAATCCCTTCATCTACGCCT 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 611 CCCTCTCTGGCTCATGTACCTGGCCATCGTCCTCTCCCACACCAATTCGGTTGTGAATCCCTTCATCTACGCCT 684
Query 869 ACCGTATCCGCGAGTTCCGCCAGACCTTCCGCAAGATCATTCGCAGCCACGTCCTGAGGCAGCAAGAACCTTTC 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 685 ACCGTATCCGCGAGTTCCGCCAGACCTTCCGCAAGATCATTCGCAGCCACGTCCTGAGGCAGCAAGAACCTTTC 758
Query 943 AAGGCAGCTGGCACCAGTGCCCGGGTCTTGGCAGCTCATGGCAGTGACGGAGAGCAGGTCAGCCTCCGTCTCAA 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 759 AAGGCAGCTGGCACCAGTGCCCGGGTCTTGGCAGCTCATGGCAGTGACGGAGAGCAGGTCAGCCTCCGTCTCAA 832
Query 1017 CGGCCACCCGCCAGGAGTGTGGGCCAACGGCAGTGCTCCCCACCCTGAGCGGAGGCCCAATGGCTACGCCCTGG 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct 833 CGGCCACCCGCCAGGAGTGTGGGCCAACGGCAGTGCTCCCCACCCTGAGCGGAGGCCCAATGGCTATGCCCTGG 906
Query 1091 GGCTGGTGAGTGGAGGGAGTGCCCAAGAGTCCCAGGGGAACACGGGCCTCCCAGACGTGGAGCTCCTTAGCCAT 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 907 GGCTGGTGAGTGGAGGGAGTGCCCAAGAGTCCCAGGGGAACACGGGCCTCCCAGACGTGGAGCTCCTTAGCCAT 980
Query 1165 GAGCTCAAGGGAGTGTGCCCAGAGCCCCCTGGCCTAGATGACCCCCTGGCCCAGGATGGAGCAGGAGTGTCC-- 1236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 981 GAGCTCAAGGGAGTGTGCCCAGAGCCCCCTGGCCTAGATGACCCCCTGGCCCAGGATGGAGCAGGAGTGTCCTG 1054
Query 1237 -------------------------------------------------------------------------- 1236
Sbjct 1055 ATGATTCATGGAGTTTGCCCCTTCCTAAGGGAAGGAGATCTTTATCTTTCTGGTTGGCTTGACCAGTCACGTTG 1128
Query 1237 -------------------------------------------------------------------------- 1236
Sbjct 1129 GGAGAAGAGAGAGAGTGCCAGGAGACCCTGAGGGCAGCCGGTTCCTACTTTGGACTGAGAGAAGGGAGCCCCAG 1202
Query 1237 -------------------------------------------------------------------------- 1236
Sbjct 1203 GCTGGAGCAGCATGAGGCCCAGCAAGAAGGGCTTGGGTTCTGAGGAAGCAGATGTTTCATGCTGTGAGGCCTTG 1276
Query 1237 -------------------------------------------------------------------------- 1236
Sbjct 1277 CACCAGGTGGGGGCCACAGCACCAGCAGCATCTTTGCTGGGCAGGGCCCAGCCCTCCACTGCAGAAGCATCTGG 1350
Query 1237 -------------------------------------------------------------------------- 1236
Sbjct 1351 AAGCACCACCTTGTCTCCACAGAGCAGCTTGGGCACAGCAGACTGGCCTGGCCCTGAGACTGGGGAGTGGCTCC 1424
Query 1237 -------------------------------------------------------------------------- 1236
Sbjct 1425 AACAGCCTCCTGCCACCCACACACCACTCTCCCTAGACTCTCCTAGGGTTCAGGAGCTGCTGGGCCCAGAGGTG 1498
Query 1237 -------------------------------------------------------------------------- 1236
Sbjct 1499 ACATTTGACTTTTTTCCAGGAAAAATGTAAGTGTGAGGAAACCCTTTTTATTTTATTACCTTTCACTCTCTGGC 1572
Query 1237 -------------------------------------------------------------------------- 1236
Sbjct 1573 TGCTGGGTCTGCCGTCGGTCCTGCTGCTAACCTGGCACCAGAGCCTCTGCCCGGGGAGCCTCAGGCAGTCCTCT 1646
Query 1237 -------------------------------------------------------------------------- 1236
Sbjct 1647 CCTGCTGTCACAGCTGCCATCCACTTCTCAGTCCCAGGGCCATCTCTTGGAGTGACAAAGCTGGGATCAAGGAC 1720
Query 1237 -------------------------------------------------------------------------- 1236
Sbjct 1721 AGGGAGTTGTAACAGAGCAGTGCCAGAGCATGGGCCCAGGTCCCAGGGGAGAGGTTGGGGCTGGCAGGCCACTG 1794
Query 1237 -------------------------------------------------------------------------- 1236
Sbjct 1795 GCATGTGCTGAGTAGCGCAGAGCTACCCAGTGAGAGGCCTTGTCTAACTGCCTTTCCTTCTAAAGGGAATGTTT 1868
Query 1237 ------------------------------------------------------- 1236
Sbjct 1869 TTTTCTGAGATAAAATAAAAACGAGCCACATCGTGTTTTAAGCTTGTCCAAATGA 1923
