Nucleotide Global Alignment

Description

Query:
TRCN0000488022
Subject:
XM_006528483.3
Aligned Length:
1980
Identities:
1809
Gaps:
3

Alignment

Query    1  ATGGCCGCAGTGATTCTGGAGAGCATCTTTCTGAAGCGATCCCAACAGAAAAAGAAAACATCACCTCTAAACTT  74
            |||||.||||||||.|||||||||||||||||||||||.|||||.|||||||||||||||||||||.|||||||
Sbjct    1  ATGGCTGCAGTGATACTGGAGAGCATCTTTCTGAAGCGCTCCCAGCAGAAAAAGAAAACATCACCTTTAAACTT  74

Query   75  CAAGAAGCGCCTGTTTCTCTTGACCGTGCACAAACTCTCCTACTATGAGTATGACTTTGAACGTGGGAGAAGAG  148
            ||||||||||||||||||||||||.||.||||||||.||.||||||||.|||||||||||||||||||||||||
Sbjct   75  CAAGAAGCGCCTGTTTCTCTTGACTGTACACAAACTTTCATACTATGAATATGACTTTGAACGTGGGAGAAGAG  148

Query  149  GCAGTAAGAAGGGTTCAATAGATGTTGAGAAGATCACTTGTGTTGAAACAGTGGTTCCTGAAAAAAATCCTCCT  222
            ||||||||||.||||||||||||||||||||||||||.||||||||||||||..||||||||||||||||.||.
Sbjct  149  GCAGTAAGAAAGGTTCAATAGATGTTGAGAAGATCACCTGTGTTGAAACAGTAATTCCTGAAAAAAATCCCCCA  222

Query  223  CCAGAAAGACAGATTCCGAGAAGAGGTGAAGAGTCCAGTGAAATGGAGCAAATTTCAATCATTGAAAGGTTCCC  296
            ||||||||||||||||||||.||||||||.|||||.|||||||||||.||.|||||||||||||||||||||||
Sbjct  223  CCAGAAAGACAGATTCCGAGGAGAGGTGAGGAGTCTAGTGAAATGGAACAGATTTCAATCATTGAAAGGTTCCC  296

Query  297  TTATCCCTTCCAGGTTGTATATGATGAAGGGCCTCTCTACGTCTTCTCCCCAACTGAAGAACTAAGGAAGCGGT  370
            .||.||.|||||||||||||||||||||||.||||||||.||.|||||||||||||||||.||.||.|||||.|
Sbjct  297  GTACCCATTCCAGGTTGTATATGATGAAGGACCTCTCTATGTTTTCTCCCCAACTGAAGAGCTGAGAAAGCGCT  370

Query  371  GGATTCACCAGCTCAAAAACGTAATCCGGTACAACAGTGATCTGGTTCAGAAATATCACCCTTGCTTCTGGATC  444
            |||||||||||||||||||.||||||||||||||.|||||.|||||.||||||||.||.||||||||||||||.
Sbjct  371  GGATTCACCAGCTCAAAAATGTAATCCGGTACAATAGTGACCTGGTACAGAAATACCATCCTTGCTTCTGGATT  444

Query  445  GATGGGCAGTATCTCTGCTGCTCTCAGACAGCCAAAAATGCTATGGGCTGCCAAATTTTGGAGAACAGGAATGG  518
            |||||.|||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct  445  GATGGACAGTATCTCTGCTGCTCTCAGACAGCCAAGAATGCTATGGGCTGCCAAATTTTGGAGAACAGGAATGG  518

Query  519  AAGCTTAAAACCTGGGAGTTCTCACCGGAAGACAAAAAAGCCTCTTCCCCCAACGCCTGAGGAGGACCAGATCT  592
            ||||||||||||||||||||||||.||.||.||.|||||||||||||||||.||.||.|||||.||.|||||||
Sbjct  519  AAGCTTAAAACCTGGGAGTTCTCATCGAAAAACGAAAAAGCCTCTTCCCCCTACCCCAGAGGAAGATCAGATCT  592

Query  593  TGAAAAAGCCACTACCGCCTGAGCCAGCAGCAGCACCAGTCTCCACAAGTGAGCTGAAAAAGGTTGTGGCCCTT  666
            |||||||.||.||.||.||.||||||.|||||||||||.|||||||||..||||||||||||||.|||||||||
Sbjct  593  TGAAAAAACCGCTTCCCCCGGAGCCAACAGCAGCACCAATCTCCACAACCGAGCTGAAAAAGGTCGTGGCCCTT  666

Query  667  TATGATTACATGCCAATGAATGCAAATGATCTACAGCTGCGGAAGGGTGATGAATATTTTATCTTGGAGGAAAG  740
            ||||||||||||||||||||.||||||||..||||..||||.|||||.||.||.|||||||||.|||||||.||
Sbjct  667  TATGATTACATGCCAATGAACGCAAATGACTTACAATTGCGAAAGGGCGAGGAGTATTTTATCCTGGAGGAGAG  740

Query  741  CAACTTACCATGGTGGAGAGCACGAGATAAAAATGGGCAGGAAGGCTACATTCCTAGTAACTATGTCACTGAAG  814
            ||||.||||.||||||.||||||||||||||||||||||||||||||||||.||.|||||||||.|||||||||
Sbjct  741  CAACCTACCGTGGTGGCGAGCACGAGATAAAAATGGGCAGGAAGGCTACATCCCAAGTAACTATATCACTGAAG  814

Query  815  CAGAAGACTCCATAGAAATGTATGAGTGGTATTCCAAACACATGACTCGGAGTCAGGCTGAGCAACTGCTAAAG  888
            |.||.|||||||||||.||||||||||||||||||||.|||||||||||.|||||.||||||||||||||||||
Sbjct  815  CTGAGGACTCCATAGAGATGTATGAGTGGTATTCCAAGCACATGACTCGAAGTCAAGCTGAGCAACTGCTAAAG  888

Query  889  CAAGAGGGGAAAGAAGGAGGTTTCATTGTCAGAGACTCCAGCAAAGCTGGCAAATATACAGTGTCTGTGTTTGC  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.||.||||||||||||||
Sbjct  889  CAAGAGGGGAAAGAAGGAGGTTTCATTGTCAGAGACTCCAGCAAAGCTGGAAAATACACCGTGTCTGTGTTTGC  962

Query  963  TAAATCCACAGGGGACCCTCAAGGGGTGATACGTCATTATGTTGTGTGTTCCACACCTCAGAGCCAGTATTACC  1036
            ||||||.||.|||||.||||||||||||||.||.|||||.||||||||||||||.||.||||||||||||||||
Sbjct  963  TAAATCTACTGGGGAGCCTCAAGGGGTGATCCGCCATTACGTTGTGTGTTCCACGCCACAGAGCCAGTATTACC  1036

Query 1037  TGGCTGAGAAGCACCTTTTCAGCACCATCCCTGAGCTCATTAACTACCATCAGCACAACTCTGCAGGACTCATA  1110
            ||||||||||.|||||.|||||||||||||||||||||||||||||||||||.||||||||||||||.||||||
Sbjct 1037  TGGCTGAGAAACACCTCTTCAGCACCATCCCTGAGCTCATTAACTACCATCAACACAACTCTGCAGGCCTCATA  1110

Query 1111  TCCAGGCTCAAATATCCAGTGTCTCAACAAAACAAGAATGCACCTTCCACTGCAGGCCTGGGATACGGATCATG  1184
            ||||||||.||||||||.||||||.||||||||||.||.||.|||||.||||||||||||||.||.||||||||
Sbjct 1111  TCCAGGCTGAAATATCCTGTGTCTAAACAAAACAAAAACGCGCCTTCTACTGCAGGCCTGGGCTATGGATCATG  1184

Query 1185  GGAAATTGATCCAAAGGACCTGACCTTCTTGAAGGAGCTGGGGACTGGACAATTTGGGGTAGTGAAGTATGGGA  1258
            |||||||||||||||||||||.|||||||||||||||||.||||||||||||||.||.||.|||||.|||||||
Sbjct 1185  GGAAATTGATCCAAAGGACCTCACCTTCTTGAAGGAGCTTGGGACTGGACAATTCGGTGTCGTGAAATATGGGA  1258

Query 1259  AATGGAGAGGCCAGTACGACGTGGCCATCAAGATGATCAAAGAAGGCTCCATGTCTGAAGATGAATTCATTGAA  1332
            |.|||||.|||||.||.||.|||||||||||||||||||.||||||.||||||||.||.|||||||||||||||
Sbjct 1259  AGTGGAGGGGCCAATATGATGTGGCCATCAAGATGATCAGAGAAGGTTCCATGTCGGAGGATGAATTCATTGAA  1332

Query 1333  GAAGCCAAAGTCATGATGAATCTTTCCCATGAGAAGCTGGTGCAGTTGTATGGCGTCTGCACCAAGCAGCGCCC  1406
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.|||||
Sbjct 1333  GAAGCCAAAGTCATGATGAATCTTTCCCATGAGAAGCTGGTGCAGTTGTATGGCGTCTGCACCAAACAACGCCC  1406

Query 1407  CATCTTCATCATCACTGAGTACATGGCCAATGGCTGCCTCCTGAACTACCTGAGGGAGATGCGCCACCGCTTCC  1480
            |||||||||||||||.|||||||||||.||||||||||||.||||||||||||||||||||||.||||||||||
Sbjct 1407  CATCTTCATCATCACCGAGTACATGGCTAATGGCTGCCTCTTGAACTACCTGAGGGAGATGCGGCACCGCTTCC  1480

Query 1481  AGACTCAGCAGCTGCTAGAGATGTGCAAGGATGTCTGTGAAGCCATGGAATACCTGGAGTCAAAGCAGTTCCTT  1554
            ||||.|||||||||||.|||||||||||.||||||||||||||.|||||||||.|||||||.||||||||||||
Sbjct 1481  AGACACAGCAGCTGCTTGAGATGTGCAAAGATGTCTGTGAAGCAATGGAATACTTGGAGTCGAAGCAGTTCCTT  1554

Query 1555  CACCGAGACCTGGCAGCTCGAAACTGTTTGGTAAACGATCAAGGAGTTGTTAAAGTATCTGATTTCGGCCTGTC  1628
            |||.||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.||.||||||||
Sbjct 1555  CACAGAGACCTGGCAGCTCGAAACTGTTTGGTAAACGATCAAGGAGTTGTGAAAGTATCTGACTTTGGCCTGTC  1628

Query 1629  CAGGTATGTCCTGGATGATGAATACACAAGCTCAGTAGGCTCCAAATTTCCAGTCCGGTGGTCCCCACCGGAAG  1702
            .|||||||||||.||||||||.|||||.|||||.|||||||||||.|||||||||||||||||.|||||.||||
Sbjct 1629  TAGGTATGTCCTTGATGATGAGTACACCAGCTCTGTAGGCTCCAAGTTTCCAGTCCGGTGGTCTCCACCAGAAG  1702

Query 1703  TCCTGATGTATAGCAAGTTCAGCAGCAAATCTGACATTTGGGCTTTTGGGGTTTTGATGTGGGAAATTTACTCC  1776
            |.||.||||||||||||||||||||||||||||||||.|||||||||||||||||.||||||||.||.||||||
Sbjct 1703  TGCTTATGTATAGCAAGTTCAGCAGCAAATCTGACATCTGGGCTTTTGGGGTTTTAATGTGGGAGATCTACTCC  1776

Query 1777  CTGGGGAAGATGCCATATGAGAGATTTACTAACAGTGAGACTGCTGAACACATTGCCCAAGGCCTACGTCTCTA  1850
            ||||||||||||||.||||||||||||||||||||||||||.||.|||||||||||.||||||.||||||||||
Sbjct 1777  CTGGGGAAGATGCCGTATGAGAGATTTACTAACAGTGAGACAGCAGAACACATTGCTCAAGGCTTACGTCTCTA  1850

Query 1851  CAGGCCTCATCTGGCTTCAGAGAAGGTATATACCATCATGTACAGTTGCTGGCATGAGAAAGCAGATGAGCGTC  1924
            |||||||||||||||.|||||||.|||||||||||||||||||||.||||||||.||||||||||||||.||||
Sbjct 1851  CAGGCCTCATCTGGCATCAGAGAGGGTATATACCATCATGTACAGCTGCTGGCACGAGAAAGCAGATGAACGTC  1924

Query 1925  CCACTTTCAAAATTCTTCTGAGCAATATTCTAGATGTCATGGATGAAGAATCCTTG  1980
            |.|.||||||||||||..||||.||.|||||||||||.|||||||||||||||   
Sbjct 1925  CTAGTTTCAAAATTCTCTTGAGTAACATTCTAGATGTGATGGATGAAGAATCC---  1977

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