Nucleotide Global Alignment

Description

Query:
TRCN0000488029
Subject:
NR_134678.1
Aligned Length:
3768
Identities:
2059
Gaps:
1707

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATTGTTGTTACTGGGAGAGTTTTGGATTTGGAATCCCGTGAGCAGGATTCTATTCTGGCTGTGCCATGTGCCAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CTGGGCAGCTGTAGGAAGTCACTTCCTCTCTGAGCCTTCACTTCCCAGTCTCTAAACTGGGGCTCACAAATGTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCATTGCAGTTTGGGGGTGGATCTGTTGTAAGAATGGACAGAAAAAAGATGGTCAACTGTAATGTGTGGTGCAT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGTGAGCTGTCACTCCCGTGTGCCCTGGTCTCCTGCTGGCCTCACTGTGGTTTGACTCAGACTTGGACTTTCCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGAATTCTGAACTTTGCCTCTCTAAGCAAAGCCCGCCAGGGGGTACACTCTGCCTTGTTTTCCATGGTGCCGTG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTTCCAGCCCTATCCACCACTGGCTTCTGATCGGCTGCTTTCTCACACTGCTGTTCCTGCAAGGCTGTGTGGCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCATGGTTAAGGGTGAGGGTTCTGCAAGGGTCAGCCAGATGCGAGTTCCGGTCCTAGGTCCACCACTTACTGGT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CAGGTGACCTCAAAAGACATGCTTTGTGTCTCCTCCTCCTTCTGCCAGGATTGTAAGTTTCCTGAGGCCTCCCC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGCCATGTGGAACTAACTCTTTTCATCTTCTGCTACTGAAATTTGGGCCTCATTAAAGAGTAACTCCTCATTCG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CCATCTGTCTCCGTGGGTTTGACTGCTCATGTAGAACACCTGAAGGAGAAGCTCATTAGCCAGGCCCAGGAAGT  740

Query    1  ----------------------------------------------------------ATGGTGGAGAATGAGC  16
                                                                      ||||||||||||||||
Sbjct  741  GAGCCGACTGCGATCTGAGCTGGGGGGCACCGACTTGGAGAAGCACCGGGACCTGCTGATGGTGGAGAATGAGC  814

Query   17  GACTGAGGCAGGAGATGCGGCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCA  90
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GACTGAGGCAGGAGATGCGGCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGTCCCTGCCCA  888

Query   91  GGTTGTGAGCACAGCCAGGAGAGCGCCCAGCTCCGTGACAAGCTGTCCCAGCTGCAGCTGGAGATGGCGGAAAG  164
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GGTTGTGAGCACAGCCAGGAGAGCGCCCAGCTCCGTGACAAGCTGTCCCAGCTGCAGCTGGAGATGGCGGAAAG  962

Query  165  CAAAGGCATGCTGTCAGAGCTGAACCTAGAGGTGCAGCAGAAGACCGACCGGCTGGCTGAGGTGGAGCTGCGAC  238
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CAAAGGCATGCTGTCAGAGCTGAACCTAGAGGTGCAGCAGAAGACCGACCGGCTGGCTGAGGTGGAGCTGCGAC  1036

Query  239  TCAAGGACTGCCTGGCTGAGAAGGCACAGGAGGAGGAGCGGCTTAGTCGGCGCCTGCGTGACAGCCACGAGACC  312
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TCAAGGACTGCCTGGCTGAGAAGGCACAGGAGGAGGAGCGGCTTAGTCGGCGCCTGCGTGACAGCCACGAGACC  1110

Query  313  ATTGCCAGCCTGCGGGCCCAGTCCCCACCTGTCAAGTATGTCATCAAGACAGTGGAGGTGGAGTCGTCCAAGAC  386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  ATTGCCAGCCTGCGGGCCCAGTCCCCACCTGTCAAGTATGTCATCAAGACAGTGGAGGTGGAGTCGTCCAAGAC  1184

Query  387  CAAGCAGGCCCTCAGCGAGTCCCAGGCCCGGAACCAGCACCTGCAGGAGCAGGTGGCTATGCAGAGGCAGGTGC  460
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CAAGCAGGCCCTCAGCGAGTCCCAGGCCCGGAACCAGCACCTGCAGGAGCAGGTGGCTATGCAGAGGCAGGTGC  1258

Query  461  TGAAGGAGATGGAACAGCAGCTGCAGAGCTCACACCAGCTGACCGCGCGGCTCCGGGCGCAGATTGCCATGTAC  534
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TGAAGGAGATGGAACAGCAGCTGCAGAGCTCACACCAGCTGACCGCGCGGCTCCGGGCGCAGATTGCCATGTAC  1332

Query  535  GAGTCAGAGCTGGAGCGGGCCCATGGGCAGATGCTGGAGGAGATGCAGTCCCTGGAAGAGGACAAGAACCGGGC  608
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GAGTCAGAGCTGGAGCGGGCCCATGGGCAGATGCTGGAGGAGATGCAGTCCCTGGAAGAGGACAAGAACCGGGC  1406

Query  609  CATTGAGGAGGCCTTTGCCAGAGCCCAGGTGGAGATGAAGGCTGTGCACGAGAATCTAGCAGGCGTCCGGACCA  682
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  CATTGAGGAGGCCTTTGCCAGAGCCCAGGTGGAGATGAAGGCTGTGCACGAGAATCTAGCAGGCGTCCGGACCA  1480

Query  683  ACTTGCTGACCTTGCAGCCGGCACTGCGGACCCTCACCAACGACTACAATGGGCTCAAGCGGCAGGTGCGCGTC  756
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 1481  ACTTGCTGACCTTGCAGCCGGCACTGCGGACCCTCACCAACGACTACAATGGGCTCAAGCGGCAGGTGCGCGGC  1554

Query  757  TTCCCACTGCTGCTGCAGGAGGCCCTCAGGAGTGTCAAGGCCGAGATAGGCCAGGCCATCGAGGAGGTCAACAG  830
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  TTCCCACTGCTGCTGCAGGAGGCCCTCAGGAGTGTCAAGGCCGAGATAGGCCAGGCCATCGAGGAGGTCAACAG  1628

Query  831  CAACAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCTGCAGCTGCGTAAGAAGTGCCACAATGAGCTCGTGC  904
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CAACAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCTGCAGCTGCGTAAGAAGTGCCACAATGAGCTCGTGC  1702

Query  905  GGCTGAAAGGGAACATCCGAGTGATTGCTCGTGTCCGGCCAGTCACCAAAGAGGATGGGGAAGGACCTGAGGCC  978
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  GGCTGAAAGGGAACATCCGAGTGATTGCTCGTGTCCGGCCAGTCACCAAAGAGGATGGGGAAGGACCTGAGGCC  1776

Query  979  ACCAATGCTGTGACTTTCGATGCCGACGACGACTCCATCATCCACCTGCTGCACAAGGGCAAGCCTGTGTCCTT  1052
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  ACCAATGCTGTGACTTTCGATGCCGACGACGACTCCATCATCCACCTGCTGCACAAGGGCAAGCCTGTGTCCTT  1850

Query 1053  CGAGCTGGACAAGGTCTTCTCCCCACAGGCCTCGCAGCAGGACGTGTTCCAGGAGGTGCAGGCCCTGGTCACCT  1126
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  CGAGCTGGACAAGGTCTTCTCCCCACAGGCCTCGCAGCAGGACGTGTTCCAGGAGGTGCAGGCCCTGGTCACCT  1924

Query 1127  CTTGCATTGATGGCTTCAATGTCTGCATCTTTGCGTACGGCCAGACGGGCGCCGGCAAGACGTACACGATGGAG  1200
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  CTTGCATTGATGGCTTCAATGTCTGCATCTTTGCGTACGGCCAGACGGGCGCCGGCAAGACGTACACGATGGAG  1998

Query 1201  GGGACCGCTGAGAACCCAGGTATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCCGAGGTGCAGGAGAAGGCGTC  1274
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  GGGACCGCTGAGAACCCAGGTATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCCGAGGTGCAGGAGAAGGCGTC  2072

Query 1275  TGACTGGGAGTACACCATCACCGTCAGCGCTGCGGAGATCTACAATGAGGTCCTCAGGGACCTGCTAGGGAAAG  1348
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  TGACTGGGAGTACACCATCACCGTCAGCGCTGCGGAGATCTACAATGAGGTCCTCAGGGACCTGCTAGGGAAAG  2146

Query 1349  AGCCTCAGGAAAAACTGGAGATCCGGCTGTGCCCAGACGGCAGTGGGCAGCTGTATGTACCAGGGCTGACTGAG  1422
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  AGCCTCAGGAAAAACTGGAGATCCGGCTGTGCCCAGACGGCAGTGGGCAGCTGTATGTACCAGGGCTGACTGAG  2220

Query 1423  TTCCAAGTGCAGAGCGTGGACGACATCAACAA------------------------------------------  1454
            ||||||||||||||||||||||||||||||||                                          
Sbjct 2221  TTCCAAGTGCAGAGCGTGGACGACATCAACAAGGTGTGGAGGCGGGAGCCCCTGACCACAGCCACACTGCTCTA  2294

Query 1455  --------------------------------------------------------GGTGTTTGAGTTTGGCCA  1472
                                                                    ||||||||||||||||||
Sbjct 2295  GAGGACACAACTGGGTTTGAATGTAGGCTCTGCTGTGTCCTAAGCACGCACCCTTGGGTGTTTGAGTTTGGCCA  2368

Query 1473  CACTAATCGCACGACCGAGTTCACCAACCTGAACGAGCACAGCTCCCGCTCGCACGCACTGCTCATCGTGACGG  1546
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct 2369  CACTAATCGCACGACCGAGTTCACCAACCTGAACGAGCACAGCTCCCGCTCGCACGCGCTGCTCATCGTGACGG  2442

Query 1547  TGCGAGGCGTGGACTGCAGCACAGGCCTCCGCACCACGGGGAAGCTGAACCTGGTGGACTTGGCTGGCTCGGAG  1620
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443  TGCGAGGCGTGGACTGCAGCACAGGCCTCCGCACCACGGGGAAGCTGAACCTGGTGGACTTGGCTGGCTCGGAG  2516

Query 1621  CGCGTGGGCAAGTCGGGGGCCGAGGGCAGCCGCCTGCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGGCTCT  1694
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517  CGCGTGGGCAAGTCGGGGGCCGAGGGCAGCCGCCTGCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGGCTCT  2590

Query 1695  GGGGGACGTCATTGCTGCCCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAACTCCAAGCTCACCTACCTGC  1768
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591  GGGGGACGTCATTGCTGCCCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAACTCCAAGCTCACCTACCTGC  2664

Query 1769  TGCAGGATTCGCTTAGTGGTGACAGCAAGACCCTCATGGTGGTACAGGTGTCCCCCGTGGAGAAGAACACTAGC  1842
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665  TGCAGGATTCGCTTAGTGGTGACAGCAAGACCCTCATGGTGGTACAGGTGTCCCCCGTGGAGAAGAACACTAGC  2738

Query 1843  GAGACGCTCTATTCCCTCAAGTTTGCTGAGAGGGTGCGCTCTGTGGAGCTGGGGCCTGGGCTACGCAGGGCAGA  1916
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739  GAGACGCTCTATTCCCTCAAGTTTGCTGAGAGGGTGCGCTCTGTGGAGCTGGGGCCTGGGCTACGCAGGGCAGA  2812

Query 1917  GCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCCGGCTTGTCAGACGCCACAGCCCTCGGCACGGG  1990
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813  GCTTGGGTCCTGGTCAAGCCAGGAGCATCTAGAGTGGGAGCCGGCTTGTCAGACGCCACAGCCCTCGGCACGGG  2886

Query 1991  CCCACTCAGCCCCCAGCTCTGGGACCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGCAGCCCT--------  2056
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
Sbjct 2887  CCCACTCAGCCCCCAGCTCTGGGACCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGCAGCCCTCGGGGAAG  2960

Query 2057  ---CGGCC------------------------------------------------------------------  2061
               |||||                                                                  
Sbjct 2961  TCGCGGCCACTGCCTGTGTGACGGATGTGACCCCGCTGGGCCTGAAGCTGGGCCCTCACTGGCCTGTCCCTGCT  3034

Query 2062  --------------------------------------------------------------------------  2061
                                                                                      
Sbjct 3035  GCAGCGCCAGGACCCCCGGAGGTAGAGGCGAGAGTGGAGGCTCTTCTTCTGCCCCGTCTCCCCTCAAAGATGAG  3108

Query 2062  --------------------------------------------------------------------------  2061
                                                                                      
Sbjct 3109  AAACATGTTCAGAAGGAAACGGTGTCTCTCGGCTGTGGCTCTGAGTGCAAATTGCATGGGCGGAAAGGCGGGGG  3182

Query 2062  --------------------------------------------------------------------------  2061
                                                                                      
Sbjct 3183  TGGCTGCTCTTCCTGGCAGGCCTGGGCCATCAGCGAACTGGGCCCCGTGAGGAGGGCGGGAGTGTGGAGGAGGG  3256

Query 2062  --------------------------------------------------------------------------  2061
                                                                                      
Sbjct 3257  TGGGCCTCTCACCCAGGCTTTCTCGGCCCCTCTCCTCAGCTTGCAGAGCTGGCCAGCCCCCTCCTTAGGGGGTG  3330

Query 2062  --------------------------------------------------------------------------  2061
                                                                                      
Sbjct 3331  GGCGAGGAGCCTCTGGGCAGACCCAAGAACCATGGGGACTGGGGTGGGTTGGTGGCACCAATGGCAGCCCTCCC  3404

Query 2062  --------------------------------------------------------------------------  2061
                                                                                      
Sbjct 3405  CGCCCCTCTCCTTCAAGGAGGGTTCCCGCAGCTGGGGGGTGTGCGGAGGCGCATGGCCTCCCGCCACGGGGCCG  3478

Query 2062  --------------------------------------------------------------------------  2061
                                                                                      
Sbjct 3479  TGCTGTGTTTATGGCTGGCAGAGGCAGCCAGCGGGTGGGGGATTCTGCTGCTCGCTCACCTGCCTGGCTCGCTG  3552

Query 2062  --------------------------------------------------------------------------  2061
                                                                                      
Sbjct 3553  GTCTCTCGAATTTTCTTCCCTCTGAAATCCTATTTAAGAACTTTTGGAAGCTTAGCCATTTTTACTTATTAAAA  3626

Query 2062  --------------------------------------------------------------------------  2061
                                                                                      
Sbjct 3627  TAAAAGAAGCCTTTTTACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA  3700

Query 2062  --------------------------------------------------------------------  2061
                                                                                
Sbjct 3701  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA  3768

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