Nucleotide Global Alignment
Description
- Query:
- TRCN0000488029
- Subject:
- XM_006530721.2
- Aligned Length:
- 2818
- Identities:
- 1829
- Gaps:
- 761
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGTCCCCTCTCGCAGGACGTGGAACTTGGGAGCCACGCCTTCACTGCGAGGCCTGTGGAGAGTGGGCCGGGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCAGGAGCCCAAGCCCGGGATGGCTCGCCCCGCCCCAGCCAGCCCAGCCGCCCGCCCTTTCCCACACACCGGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGGGAGGTTGAGAACTGGGCGTGGAAAAGATATTCTACCCAGTGGCGAGGAAGACTCCACTTCTCGGACTGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTCGCCCGTCTCTTGCACAGTGTCGAGCCCTCAGCGTGGACTGGCCTGGCCCTAGGAGTCCCCATAGACTCTA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCTGACAGTGCAGCAGGCCCTGCGGGACAAGGGGTGCGAGAGCAAGAGTCAGGGGACGAAAGAAGACGAGCTCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGAAGAGGCAGGCGCCGGCCCCCAGGCGGGACCGGGAGGCCCCAGAAGCTGGTGGTACCATGAATGTAGAAAAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACAGGTGGGCGGCTCTTTGGCATCGGGAGGTGCTCAAGCCTGTCCGGGGCACCAGGCCCAGACCCCGTGGTACA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TAGGACCGTGGAGGCCATGTCCCAGCTTCAGGAGGAGCTGGTAGTCCTTCGGGAGAGGCTGGCCCTCCACGACA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGACCGGCAAGCCACAACCACCCAGCTGCAGAACCAGGTGGAGAATCTAAAGGAAAAGCTCATTAGCCAGGCC 666
Query 1 ------------------------------------------------------------------ATGGTGGA 8
||||||||
Sbjct 667 CAGGAAGTGAGCCGACTGCGATCAGAACTGGGAGGCACGGACGCGGAGAAGCACAGGGACAGACTGATGGTGGA 740
Query 9 GAATGAGCGACTGAGGCAGGAGATGCGGCGCTGTGAGGCCGAGCTGCAAGAGCTGCGCACAAAGCCAGCAGGT- 81
||||||||..||||||||||||.||.||||||||||||.|||.|||||.|||||.||..| |||||.|||
Sbjct 741 GAATGAGCAGCTGAGGCAGGAGCTGAGGCGCTGTGAGGTCGAACTGCAGGAGCTTCGGGC----CCAGCCGGTG 810
Query 82 ---CCCTGCCCAGGTTGTGAGCACAGCCAGGAGAGCGCCCAGCTCCGTGACAAGCTGTCCCAGCTGCAGCTGGA 152
||||||...||.|||||||||||||||||||||..|||||||||||||||||||||||||||||||.||||
Sbjct 811 GTGCCCTGCGAGGGCTGTGAGCACAGCCAGGAGAGCAGCCAGCTCCGTGACAAGCTGTCCCAGCTGCAGTTGGA 884
Query 153 GATGGCGGAAAGCAAAGGCATGCTGTCAGAGCTGAACCTAGAGGTGCAGCAGAAGACCGACCGGCTGGCTGAGG 226
..||||.||.|.|||||||||||||||.||.||||||||.||||||||||||||.||.|||||||||||.||||
Sbjct 885 AGTGGCTGAGAACAAAGGCATGCTGTCGGAACTGAACCTGGAGGTGCAGCAGAAAACGGACCGGCTGGCAGAGG 958
Query 227 TGGAGCTGCGACTCAAGGACTGCCTGGCTGAGAAGGCACAGGAGGAGGAGCGGCTTAGTCGGCGCCTGCGTGAC 300
|.||||||||.|||||||||||.|||||||||||.||.|||||||||||.|||||.||.|||||||||||||||
Sbjct 959 TAGAGCTGCGCCTCAAGGACTGTCTGGCTGAGAAAGCCCAGGAGGAGGAACGGCTCAGCCGGCGCCTGCGTGAC 1032
Query 301 AGCCACGAGACCATTGCCAGCCTGCGGGCCCAGTCCCCACCTGTCAAGTATGTCATCAAGACAGTGGAGGTGGA 374
|||||.|||||.||.|||||.|||.|||||||||||||||||||.||||||||||||||||||||||||||.||
Sbjct 1033 AGCCATGAGACTATCGCCAGTCTGAGGGCCCAGTCCCCACCTGTTAAGTATGTCATCAAGACAGTGGAGGTAGA 1106
Query 375 GTCGTCCAAGACCAAGCAGGCCCTCAGCGAGTCCCAGGCCCGGAACCAGCACCTGCAGGAGCAGGTGGCTATGC 448
|||.|||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||.|||||.||||
Sbjct 1107 GTCTTCCAAGACCAAGCAGGCCCTCAGCGAGTCCCAGACCCGGAACCAGCACCTGCAGGAGCAAGTGGCCATGC 1180
Query 449 AGAGGCAGGTGCTGAAGGAGATGGAACAGCAGCTGCAGAGCTCACACCAGCTGACCGCGCGGCTCCGGGCGCAG 522
||.||||||||||||||||||||||.||||||||.||||.|||.|||||||||||.|..|.|.|.|||||.|||
Sbjct 1181 AGCGGCAGGTGCTGAAGGAGATGGAGCAGCAGCTACAGAACTCCCACCAGCTGACAGTCCAGTTGCGGGCTCAG 1254
Query 523 ATTGCCATGTACGAGTCAGAGCTGGAGCGGGCCCATGGGCAGATGCTGGAGGAGATGCAGTCCCTGGAAGAGGA 596
|||||||||||.|||.||||||||||||||||.||.|||||||||||||||||||||||||||.||||.|||||
Sbjct 1255 ATTGCCATGTATGAGGCAGAGCTGGAGCGGGCACACGGGCAGATGCTGGAGGAGATGCAGTCCTTGGAGGAGGA 1328
Query 597 CAAGAACCGGGCCATTGAGGAGGCCTTTGCCAGAGCCCAGGTGGAGATGAAGGCTGTGCACGAGAATCTAGCAG 670
.|||||||||||||||||||||||||||||..|.||||||||||||||||||||.||.||||||||.||.||||
Sbjct 1329 TAAGAACCGGGCCATTGAGGAGGCCTTTGCACGGGCCCAGGTGGAGATGAAGGCAGTACACGAGAACCTGGCAG 1402
Query 671 GCGTCCGGACCAACTTGCTGACCTTGCAGCCGGCACTGCGGACCCTCACCAACGACTACAATGGGCTCAAGCGG 744
|.|||.||||||||.|||||||..|||||||.||.|||.|||||||||||||||||||||||||||||||||||
Sbjct 1403 GTGTCAGGACCAACCTGCTGACGCTGCAGCCTGCGCTGAGGACCCTCACCAACGACTACAATGGGCTCAAGCGG 1476
Query 745 CAGGTGCGCGTCTTCCCACTGCTGCTGCAGGAGGCCCTCAGGAGTGTCAAGGCCGAGATAGGCCAGGCCATCGA 818
||||||||.|.||||||..||||||||||||||||.||||||||||||||.||.|||||.||||||||||||||
Sbjct 1477 CAGGTGCGGGGCTTCCCCTTGCTGCTGCAGGAGGCTCTCAGGAGTGTCAAAGCTGAGATCGGCCAGGCCATCGA 1550
Query 819 GGAGGTCAACAGCAACAACCAGGAGCTGCTGCGCAAGTACCGCCGCGAGCTGCAGCTGCGTAAGAAGTGCCACA 892
||||||.||.||||||||||||||||||.||||||||||||||||.||.||.||||||||.|||||.|||||.|
Sbjct 1551 GGAGGTTAATAGCAACAACCAGGAGCTGTTGCGCAAGTACCGCCGGGAACTACAGCTGCGCAAGAAATGCCATA 1624
Query 893 ATGAGCTCGTGCGGCTGAAAGGGAACATCCGAGTGATTGCTCGTGTCCGGCCAGTCACCAAAGAGGATGGGGAA 966
|.|||||.||.||||||||.||.||||||||.||||||||.||.|||||||||||||||||.||||||||.|||
Sbjct 1625 ACGAGCTGGTCCGGCTGAAGGGAAACATCCGGGTGATTGCCCGAGTCCGGCCAGTCACCAAGGAGGATGGAGAA 1698
Query 967 GGACCTGAGGCCACCAATGCTGTGACTTTCGATGCCGACGACGACTCCATCATCCACCTGCTGCACAAGGGCAA 1040
|||||.|||||.||||||||||||||.||.||..|.||.||.||||||||||||||||||||||||||||||||
Sbjct 1699 GGACCCGAGGCAACCAATGCTGTGACCTTTGACCCTGATGATGACTCCATCATCCACCTGCTGCACAAGGGCAA 1772
Query 1041 GCCTGTGTCCTTCGAGCTGGACAAGGTCTTCTCCCCACAGGCCTCGCAGCAGGACGTGTTCCAGGAGGTGCAGG 1114
|||.||||||||||||||||||||||||||||||||...|||.||.||||||||||||||||||||||||||||
Sbjct 1773 GCCCGTGTCCTTCGAGCTGGACAAGGTCTTCTCCCCGTGGGCTTCCCAGCAGGACGTGTTCCAGGAGGTGCAGG 1846
Query 1115 CCCTGGTCACCTCTTGCATTGATGGCTTCAATGTCTGCATCTTTGCGTACGGCCAGACGGGCGCCGGCAAGACG 1188
||||..|.|||||.|||||.|||||||||||||||||.||||||||.|||||||||||.||.|||||||||||.
Sbjct 1847 CCCTCATTACCTCCTGCATCGATGGCTTCAATGTCTGTATCTTTGCTTACGGCCAGACAGGTGCCGGCAAGACA 1920
Query 1189 TACACGATGGAGGGGACCGCTGAGAACCCAGGTATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCCGAGGTGCA 1262
||.||.|||||||||||..|.||||||||.||.||||||||||||||||||||||||||||||||.||||||||
Sbjct 1921 TATACAATGGAGGGGACTCCCGAGAACCCGGGCATCAACCAGCGGGCCCTGCAGCTGCTCTTCTCGGAGGTGCA 1994
Query 1263 GGAGAAGGCGTCTGACTGGGAGTACACCATCACCGTCAGCGCTGCGGAGATCTACAATGAGGTCCTCAGGGACC 1336
|||||||||||||||||||.||||||.|||||||||||||||.||.|||||.||||||||.|||||||||||||
Sbjct 1995 GGAGAAGGCGTCTGACTGGCAGTACAACATCACCGTCAGCGCAGCTGAGATTTACAATGAAGTCCTCAGGGACC 2068
Query 1337 TGCTAGGGAAAGAGCCTCAGGAAAAACTGGAGATCCGGCTGTGCCCAGACGGCAGTGGGCAGCTGTATGTACCA 1410
||||.|||||||||||||||||.||.|||||||||||.||||||||.||.|||||||||||.||||||||.|||
Sbjct 2069 TGCTGGGGAAAGAGCCTCAGGAGAAGCTGGAGATCCGACTGTGCCCGGATGGCAGTGGGCAACTGTATGTGCCA 2142
Query 1411 GGGCTGACTGAGTTCCAAGTGCAGAGCGTGGACGACATCAACAAGGTGTTTGAGTTTGGCCACACTAATCGCAC 1484
|||||||||||||||||.||||||||||||||.|||||||||||||||||||||||||||.|||..||.|||||
Sbjct 2143 GGGCTGACTGAGTTCCAGGTGCAGAGCGTGGATGACATCAACAAGGTGTTTGAGTTTGGCTACAACAACCGCAC 2216
Query 1485 GACCGAGTTCACCAACCTGAACGAGCACAGCTCCCGCTCGCACGCACTGCTCATCGTGACGGTGCGAGGCGTGG 1558
.|||||||||||||||||||||||.||||||||||||||.|||||.||||||||||||||.|||.||||.||||
Sbjct 2217 CACCGAGTTCACCAACCTGAACGAACACAGCTCCCGCTCCCACGCTCTGCTCATCGTGACAGTGAGAGGTGTGG 2290
Query 1559 ACTGCAGCACAGGCCTCCGCACCACGGGGAAGCTGAACCTGGTGGACTTGGCTGGCTCGGAGCGCGTGGGCAAG 1632
|.|||||||||||||||||||||||||||||||||||||||||||||.|||||||.||.|||||.|||||||||
Sbjct 2291 ATTGCAGCACAGGCCTCCGCACCACGGGGAAGCTGAACCTGGTGGACCTGGCTGGTTCAGAGCGTGTGGGCAAG 2364
Query 1633 TCGGGGGCCGAGGGCAGCCGCCTGCGGGAGGCGCAGCACATCAACAAGTCGCTGTCGGCTCTGGGGGACGTCAT 1706
||||||||.|||||||.|||||||||.|||||.|||||||||||||.|||.||.||.||.||||||||||||||
Sbjct 2365 TCGGGGGCTGAGGGCAACCGCCTGCGAGAGGCACAGCACATCAACAGGTCACTATCCGCCCTGGGGGACGTCAT 2438
Query 1707 TGCTGCCCTGCGCTCCCGCCAGGGCCACGTGCCCTTCCGCAACTCCAAGCTCACCTACCTGCTGCAGGATTCGC 1780
||||||||||||.||.||.||.|||||.||||||||||||||.|||||.||||||||||||||||||||.||.|
Sbjct 2439 TGCTGCCCTGCGTTCTCGACAAGGCCATGTGCCCTTCCGCAATTCCAAACTCACCTACCTGCTGCAGGACTCAC 2512
Query 1781 TTAGTGGTGACAGCAAGACCCTCATGGTGGTACAGGTGTCCCCCGTGGAGAAGAACACTAGCGAGACGCTCTAT 1854
|.||||||||||||||||||||.||||||||||||||||||||.||||||||||||||.||||||||.||.||.
Sbjct 2513 TCAGTGGTGACAGCAAGACCCTTATGGTGGTACAGGTGTCCCCAGTGGAGAAGAACACCAGCGAGACTCTGTAC 2586
Query 1855 TCCCTCAAGTTTGCTGAGAGGGTGCGCTCTGTGGAGCTGGGGCCTGGGCTACGCAGGGCAGAGCTTGGGTCCTG 1928
|||||||..||||||||||||||.||||||||||||.||||.||||||...|||.|..|||||||.||.|||||
Sbjct 2587 TCCCTCAGATTTGCTGAGAGGGTTCGCTCTGTGGAGTTGGGCCCTGGGTCCCGCCGCACAGAGCTGGGTTCCTG 2660
Query 1929 GTCAAGCCAGGAGCATCTAGAGTGGGAGCCGGCTTGTCAGACGCCACAGCCCTCGGCACGGGCCCACTCAGCCC 2002
|||||||||||||||.||.|||||||||||||||||.|||||.||||||||..|.|||||.||||||||.||||
Sbjct 2661 GTCAAGCCAGGAGCACCTGGAGTGGGAGCCGGCTTGCCAGACACCACAGCCTACAGCACGAGCCCACTCTGCCC 2734
Query 2003 CCAGCTCTGGGACCAGTAGCCGCCCTGGATCCATCCGGAGGAAGCTGCAGCCCTC-----------GGCC---- 2061
|..||||||||||||||||||||||.||.||||||||.|||||.||||||||.|| ||||
Sbjct 2735 CTGGCTCTGGGACCAGTAGCCGCCCAGGTTCCATCCGAAGGAAACTGCAGCCGTCAGGGAAGTTGAGGCCAGTG 2808
Query 2062 ------ 2061
Sbjct 2809 CCTGTG 2814
