Nucleotide Global Alignment
Description
- Query:
- TRCN0000488041
- Subject:
- NR_135748.1
- Aligned Length:
- 2858
- Identities:
- 1249
- Gaps:
- 1607
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGAGGGGGCTACATCCCCGGCTTTAGACGCGCGAGTCTCAGGTCCCGCTAATTACCTGGCGGGTGCTGCCCAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCTGCCCTCGCGCACCTAGCGCGGTGGCAGGCGGGAAGGCGGGGCCTGGGGGAGCCCCACCCCTGGAGACTGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCTGGGGCCTCCCTCTCCTCCGCCCGCCCGCCTGCCACTAGCTCATTGCGCCTCTCCTGCAGTCTGATTGGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCGGCTCCCATTCCGGCTCCAGCCTCCAATCCGACCCCCATTTCGGCTGCAGCCTCGGACCTAGCTCCGGCCCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGGTCTATCCGGTTGCATCCTCCCTCCCTGTTCCGGATCTTATCTTGCGCCAGCGCCTACTCCAGGATCCCGTA 370
Query 1 ---------------ATGGCTGGTCCCTTCTCCCGTCTGCTGTCCGCCCGCCCGGGACTCAGGCTCCTGGCTTT 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCCAGACCTCAAGCCATGGCTGGTCCCTTCTCCCGTCTGCTGTCCGCCCGCCCGGGACTCAGGCTCCTGGCTTT 444
Query 60 GGCCGGAGCGGGGTCTCTAGCCGCTGGGTTTCTGCTCCGACCGGAACCTGTACGAGCTGCCAGTGAACGACGGA 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGCCGGAGCGGGGTCTCTAGCCGCTGGGTTTCTGCTCCGACCGGAACCTGTACGAGCTGCCAGTGAACGACGGA 518
Query 134 GGCTGTATCCCCCG------------------------------------------------------------ 147
||||||||||||||
Sbjct 519 GGCTGTATCCCCCGAGTGTTGTGTCATGGGAGGAAAGAACTGAGCAGATCTGAAGAAACTGAGCTGGCCAGCCA 592
Query 148 -------------------------------------------------------------------------- 147
Sbjct 593 GAGGCAACTAGAACTATTAGGAAAGCATAGACTCTGAAAGTCCCTAAAGAGATTACCAAGGTTTACCCTCTTTC 666
Query 148 -------------------------------------------------------------------------- 147
Sbjct 667 TAATTCCCCCTCCTCCCGCGGAGCAAAGCCAGACATGGCCAACTGGACAGCTCCCAGGTAACTGCACTAGGTCT 740
Query 148 ---------------------------------------------AGCGCTGAGTACCCAGACCTCCGAAAGCA 176
|||||||||||||||||||||||||||||
Sbjct 741 AGGCGTCTGTGCCCTCCCTCCATGGTTACTGGGTACCCCCTCCCCAGCGCTGAGTACCCAGACCTCCGAAAGCA 814
Query 177 CAACAACTGCATGGCCAGTCACCTGACCCCAGCAGTCTATGCACGGCTCTGCGACAAGACCACACCCACTGGTT 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CAACAACTGCATGGCCAGTCACCTGACCCCAGCAGTCTATGCACGGCTCTGCGACAAGACCACACCCACTGGTT 888
Query 251 GGACGCTAGATCAGTGTATCCAGACTGGCGTGGACAACCCTGGCCACCCCTTCATCAAGACTGTGGGCATGGTG 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GGACGCTAGATCAGTGTATCCAGACTGGCGTGGACAACCCTGGCCACCCCTTCATCAAGACTGTGGGCATGGTG 962
Query 325 GCTGGAGATGAGGAGACCTATGAGGTATTTGCTGACCTGTTTGACCCTGTGATCCAAGAGCGACACAATGGATA 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GCTGGAGATGAGGAGACCTATGAGGTATTTGCTGACCTGTTTGACCCTGTGATCCAAGAGCGACACAATGGATA 1036
Query 399 TGACCCCCGGACAATGAAGCACACCACGGATCTAGATGCCAGTAAAATCCGTTCTGGCTACTTTGATGAGAGGT 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TGACCCCCGGACAATGAAGCACACCACGGATCTAGATGCCAGTAAAATCCGTTCTGGCTACTTTGATGAGAGGT 1110
Query 473 ATGTATTGTCCTCTAGAGTCAGAACTGGCCGAAGCATCCGAGGACTCAGTCTGCCTCCAGCTTGCACTCGAGCA 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ATGTATTGTCCTCTAGAGTCAGAACTGGCCGAAGCATCCGAGGACTCAGTCTGCCTCCAGCTTGCACTCGAGCA 1184
Query 547 GAGCGACGAGAGGTGGAACGTGTTGTGGTGGATGCACTGAGTGGCCTGAAGGGTGACCTGGCTGGACGTTACTA 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GAGCGACGAGAGGTGGAACGTGTTGTGGTGGATGCACTGAGTGGCCTGAAGGGTGACCTGGCTGGACGTTACTA 1258
Query 621 TAGGCTCAGTGAGATGACAGAGGCTGAACAGCAGCAGCTTATTGATGACCACTTTCTGTTTGATAAGCCTGTGT 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TAGGCTCAGTGAGATGACAGAGGCTGAACAGCAGCAGCTTATTGATGACCACTTTCTGTTTGATAAGCCTGTGT 1332
Query 695 CCCCGTTGCTGACTGCAGCAGGAATGGCTCGAGACTGGCCAGATGCTCGTGGAATTTGGCACAACAATGAGAAG 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CCCCGTTGCTGACTGCAGCAGGAATGGCTCGAGACTGGCCAGATGCTCGTGGAATTTGGCACAACAATGAGAAG 1406
Query 769 AGCTTCCTGATCTGGGTGAATGAGGAGGATCATACACGGGTGATCTCCATGGAGAAGGGTGGTAACATGAAGAG 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AGCTTCCTGATCTGGGTGAATGAGGAGGATCATACACGGGTGATCTCCATGGAGAAGGGTGGTAACATGAAGAG 1480
Query 843 AGTGTTTGAAAGATTCTGCCGAGGCCTCAAAG------------------------------------------ 874
||||||||||||||||||||||||||||||||
Sbjct 1481 AGTGTTTGAAAGATTCTGCCGAGGCCTCAAAGAGGTTGTTGTGGGGATTAAGTGAAATACAGGTAAAGTACTTG 1554
Query 875 -------------------------------------------------------------------------- 874
Sbjct 1555 GTCCACAGTAAGTGCTTAATAAGTGTTAAAGTGTTAGCTGCAATATTATTCTGGATGGAAGAGTTTCCCCCCAT 1628
Query 875 -------------------------------------------------------------------------- 874
Sbjct 1629 GTTCAGCATGTAAGATATCCCCTATGGCATGGTTCCTTCTGAACTATAAAGAGGATCCCTTTACTCATGTTGGG 1702
Query 875 -------------------------------------------------------------------------- 874
Sbjct 1703 TTGTGGTCTTTGTGACCATCATTCTGCTAGATCCCTTGTCTCTTGAACTCTAATAGTCATCTTCATGACTACAT 1776
Query 875 -------------------------------------------------------------------------- 874
Sbjct 1777 GGTTAAGTGAAGCCAAACGCCTTCCCCCCGCCCCCTATTCCTATGAATCTGGCTTTTCTGCTCTGTTTTCATCT 1850
Query 875 -------------------------------------------------------------------------- 874
Sbjct 1851 TTCTCTGCATTCACACAGGTGCTCCGTTCACAGCTAACAGAATGTTATCTTACCTCTTCCTGGCAAAGCTTACA 1924
Query 875 -------------------------------------------------------------------------- 874
Sbjct 1925 CCTTCATCTTCTGTCTGAAGGGACCCTTCTAAGCTCTAGGCTCATTAGCAAAGCAAAGATAATCGATGCATGCA 1998
Query 875 -------------------------------------------------------------------------- 874
Sbjct 1999 GACCTCATTGAATAATCAGTCATCTCTCAGTTCAGTTTACCACCTCTGTTCATTTCCCTAGATCATCCTTAATA 2072
Query 875 -------------------------------------------------------------------------- 874
Sbjct 2073 CACCACTCCTTCGAGTTTTCTTCTTCCACATAAGATATTTTTTCACAATCTCATTATTATGCACATCATAATTT 2146
Query 875 -------------------------------------------------------------------------- 874
Sbjct 2147 TGCATCATGCATGCATGAAAACAATAACAAACCTTTTTCATTTAAAAAAAGACCAATGTCATTCATTCACAGCC 2220
Query 875 -------------------------------------------------------------------------- 874
Sbjct 2221 AAGTTTCTGTTCTAGACATATTTCTAGTGTTCTTGTGGGTCTAGCTAAGGGAGGGTCCAGGGTTAATGAAATAT 2294
Query 875 -----------------------------------AGGTGGAGAGACTTATCCAAGAACGTGGCTGGGAGTTCA 913
|||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CCCTGATTTTTCGTTAACAAAACCTTTGTGGACTCAGGTGGAGAGACTTATCCAAGAACGTGGCTGGGAGTTCA 2368
Query 914 TGTGGAATGAGCGTTTGGGATACATCTTGACCTGTCCATCTAACCTGGGCACTGGACTTCGGGCAGGAGTGCAC 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TGTGGAATGAGCGTTTGGGATACATCTTGACCTGTCCATCTAACCTGGGCACTGGACTTCGGGCAGGAGTGCAC 2442
Query 988 ATCAAACTGCCCCTGCTAAGCAAAGATAGCCGCTTCCCAAAGATCCTGGAGAACCTAAGACTCCAAAAGCGTGG 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 2443 ATCAAACTGCCCCTGCTAAGCAAAGATAGCCGCTTCCCAAAGATCCTGGAGAACCTAAGACTCCAAAAACGTGG 2516
Query 1062 TACTGGAGGAGTGGACACTGCTGCCACAGGCGGTGTCTTTGATATTTCTAATTTGGACCGACTAGGCAAATCAG 1135
||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 TACTGGAGGAGTGGACACTGCTGCTACAGGCGGTGTCTTTGATATTTCTAATTTGGACCGACTAGGCAAATCAG 2590
Query 1136 AGGTGGAGCTGGTGCAACTGGTCATCGATGGAGTAAACTATTTGATTGATTGTGAACGGCGTCTGGAGAGAGGC 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 AGGTGGAGCTGGTGCAACTGGTCATCGATGGAGTAAACTATTTGATTGATTGTGAACGGCGTCTGGAGAGAGGC 2664
Query 1210 CAGGATATCCGCATCCCCACACCTGTCATCCACACCAAGCAT-------------------------------- 1251
||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 CAGGATATCCGCATCCCCACACCTGTCATCCACACCAAGCATTAACTCCCCATCGCCAGCTGATGACTCAAGAT 2738
Query 1252 -------------------------------------------------------------------------- 1251
Sbjct 2739 TCCCAGGAGTTCTGCTCATTCTAATGATGGCCCATTCTACTTGCTCTGGACCTGCCCCCGCATCCCCTGCCTCC 2812
Query 1252 ---------------------------------------------- 1251
Sbjct 2813 ATCCTAGTAAAGACTCCTTGCTATGCTGCAAAAAAAAAAAAAAAAA 2858
