Nucleotide Global Alignment
Description
- Query:
- TRCN0000488041
- Subject:
- NR_135749.1
- Aligned Length:
- 2882
- Identities:
- 1205
- Gaps:
- 1675
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGAGGGGGCTACATCCCCGGCTTTAGACGCGCGAGTCTCAGGTCCCGCTAATTACCTGGCGGGTGCTGCCCAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCTGCCCTCGCGCACCTAGCGCGGTGGCAGGCGGGAAGGCGGGGCCTGGGGGAGCCCCACCCCTGGAGACTGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCTGGGGCCTCCCTCTCCTCCGCCCGCCCGCCTGCCACTAGCTCATTGCGCCTCTCCTGCAGTCTGATTGGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCGGCTCCCATTCCGGCTCCAGCCTCCAATCCGACCCCCATTTCGGCTGCAGCCTCGGACCTAGCTCCGGCCCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGGTCTATCCGGTTGCATCCTCCCTCCCTGTTCCGGATCTTATCTTGCGCCAGCGCCTACTCCAGGATCCCGTA 370
Query 1 ---------------ATGGCTGGTCCCTTCTCCCGTCTGCTGTCCGCCCGCCCGGGACTCAGGCTCCTGGCTTT 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCCAGACCTCAAGCCATGGCTGGTCCCTTCTCCCGTCTGCTGTCCGCCCGCCCGGGACTCAGGCTCCTGGCTTT 444
Query 60 GGCCGGAGCGGGGTCTCTAGCCGCTGGGTTTCTGCTCCGACCGGAACCTGTACGAGCTGCCAGTGAACGACGGA 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGCCGGAGCGGGGTCTCTAGCCGCTGGGTTTCTGCTCCGACCGGAACCTGTACGAGCTGCCAGTGAACGACGGA 518
Query 134 GGCTGTATCCCCCG------------------------------------------------------------ 147
||||||||||||||
Sbjct 519 GGCTGTATCCCCCGAGGCTTTTCCCCTCCTCCATCCGTAGTGTTGTGTCATGGGAGGAAAGAACTGAGCAGATC 592
Query 148 -------------------------------------------------------------------------- 147
Sbjct 593 TGAAGAAACTGAGCTGGCCAGCCAGAGGCAACTAGAACTATTAGGAAAGCATAGACTCTGAAAGTCCCTAAAGA 666
Query 148 -------------------------------------------------------------------------- 147
Sbjct 667 GATTACCAAGGTTTACCCTCTTTCTAATTCCCCCTCCTCCCGCGGAGCAAAGCCAGACATGGCCAACTGGACAG 740
Query 148 ---------------------------------------------------------------------AGCGC 152
|||||
Sbjct 741 CTCCCAGGTAACTGCACTAGGTCTAGGCGTCTGTGCCCTCCCTCCATGGTTACTGGGTACCCCCTCCCCAGCGC 814
Query 153 TGAGTACCCAGACCTCCGAAAGCACAACAACTGCATGGCCAGTCACCTGACCCCAGCAGTCTATGCACGGCTCT 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGAGTACCCAGACCTCCGAAAGCACAACAACTGCATGGCCAGTCACCTGACCCCAGCAGTCTATGCACGGCTCT 888
Query 227 GCGACAAGACCACACCCACTGGTTGGACGCTAGATCAGTGTATCCAGACTGGCGTGGACAACCCTGGCCACCCC 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GCGACAAGACCACACCCACTGGTTGGACGCTAGATCAGTGTATCCAGACTGGCGTGGACAACCCTGGCCACCCC 962
Query 301 TTCATCAAGACTGTGGGCATGGTGGCTGGAGATGAGGAGACCTATGAGGTATTTGCTGACCTGTTTGACCCTGT 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TTCATCAAGACTGTGGGCATGGTGGCTGGAGATGAGGAGACCTATGAGGTATTTGCTGACCTGTTTGACCCTGT 1036
Query 375 GATCCAAGAGCGACACAATGGATATGACCCCCGGACAATGAAGCACACCACGGATCTAGATGCCAGTAAAATCC 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GATCCAAGAGCGACACAATGGATATGACCCCCGGACAATGAAGCACACCACGGATCTAGATGCCAGTAAA---- 1106
Query 449 GTTCTGGCTACTTTGATGAGAGGTATGTATTGTCCTCTAGAGTCAGAACTGGCCGAAGCATCCGAGGACTCAGT 522
||||||||||||||||||||||||||||||||||
Sbjct 1107 ----------------------------------------AGTCAGAACTGGCCGAAGCATCCGAGGACTCAGT 1140
Query 523 CTGCCTCCAGCTTGCACTCGAGCAGAGCGACGAGAGGTGGAACGTGTTGTGGTGGATGCACTGAGTGGCCTGAA 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1141 CTGCCTCCAGCTTGCACTCGAGCAGAGCGACGAGAGGTGGAACGTGTTGTGGTGGATGCACTGAGTGGCCTGAA 1214
Query 597 GGGTGACCTGGCTGGACGTTACTATAGGCTCAGTGAGATGACAGAGGCTGAACAGCAGCAGCTTATTGATGACC 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1215 GGGTGACCTGGCTGGACGTTACTATAGGCTCAGTGAGATGACAGAGGCTGAACAGCAGCAGCTTATTGATGACC 1288
Query 671 ACTTTCTGTTTGATAAGCCTGTGTCCCCGTTGCTGACTGCAGCAGGAATGGCTCGAGACTGGCCAGATGCTCGT 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1289 ACTTTCTGTTTGATAAGCCTGTGTCCCCGTTGCTGACTGCAGCAGGAATGGCTCGAGACTGGCCAGATGCTCGT 1362
Query 745 GGAATTTGGCACAACAATGAGAAGAGCTTCCTGATCTGGGTGAATGAGGAGGATCATACACGGGTGATCTCCAT 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1363 GGAATTTGGCACAACAATGAGAAGAGCTTCCTGATCTGGGTGAATGAGGAGGATCATACACGGGTGATCTCCAT 1436
Query 819 GGAGAAGGGTGGTAACATGAAGAGAGTGTTTGAAAGATTCTGCCGAGGCCTCAAAG------------------ 874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1437 GGAGAAGGGTGGTAACATGAAGAGAGTGTTTGAAAGATTCTGCCGAGGCCTCAAAGAGGTTGTTGTGGGGATTA 1510
Query 875 -------------------------------------------------------------------------- 874
Sbjct 1511 AGTGAAATACAGGTAAAGTACTTGGTCCACAGTAAGTGCTTAATAAGTGTTAAAGTGTTAGCTGCAATATTATT 1584
Query 875 -------------------------------------------------------------------------- 874
Sbjct 1585 CTGGATGGAAGAGTTTCCCCCCATGTTCAGCATGTAAGATATCCCCTATGGCATGGTTCCTTCTGAACTATAAA 1658
Query 875 -------------------------------------------------------------------------- 874
Sbjct 1659 GAGGATCCCTTTACTCATGTTGGGTTGTGGTCTTTGTGACCATCATTCTGCTAGATCCCTTGTCTCTTGAACTC 1732
Query 875 -------------------------------------------------------------------------- 874
Sbjct 1733 TAATAGTCATCTTCATGACTACATGGTTAAGTGAAGCCAAACGCCTTCCCCCCGCCCCCTATTCCTATGAATCT 1806
Query 875 -------------------------------------------------------------------------- 874
Sbjct 1807 GGCTTTTCTGCTCTGTTTTCATCTTTCTCTGCATTCACACAGGTGCTCCGTTCACAGCTAACAGAATGTTATCT 1880
Query 875 -------------------------------------------------------------------------- 874
Sbjct 1881 TACCTCTTCCTGGCAAAGCTTACACCTTCATCTTCTGTCTGAAGGGACCCTTCTAAGCTCTAGGCTCATTAGCA 1954
Query 875 -------------------------------------------------------------------------- 874
Sbjct 1955 AAGCAAAGATAATCGATGCATGCAGACCTCATTGAATAATCAGTCATCTCTCAGTTCAGTTTACCACCTCTGTT 2028
Query 875 -------------------------------------------------------------------------- 874
Sbjct 2029 CATTTCCCTAGATCATCCTTAATACACCACTCCTTCGAGTTTTCTTCTTCCACATAAGATATTTTTTCACAATC 2102
Query 875 -------------------------------------------------------------------------- 874
Sbjct 2103 TCATTATTATGCACATCATAATTTTGCATCATGCATGCATGAAAACAATAACAAACCTTTTTCATTTAAAAAAA 2176
Query 875 -------------------------------------------------------------------------- 874
Sbjct 2177 GACCAATGTCATTCATTCACAGCCAAGTTTCTGTTCTAGACATATTTCTAGTGTTCTTGTGGGTCTAGCTAAGG 2250
Query 875 -----------------------------------------------------------AGGTGGAGAGACTTA 889
|||||||||||||||
Sbjct 2251 GAGGGTCCAGGGTTAATGAAATATCCCTGATTTTTCGTTAACAAAACCTTTGTGGACTCAGGTGGAGAGACTTA 2324
Query 890 TCCAAGAACGTGGCTGGGAGTTCATGTGGAATGAGCGTTTGGGATACATCTTGACCTGTCCATCTAACCTGGGC 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2325 TCCAAGAACGTGGCTGGGAGTTCATGTGGAATGAGCGTTTGGGATACATCTTGACCTGTCCATCTAACCTGGGC 2398
Query 964 ACTGGACTTCGGGCAGGAGTGCACATCAAACTGCCCCTGCTAAGCAAAGATAGCCGCTTCCCAAAGATCCTGGA 1037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2399 ACTGGACTTCGGGCAGGAGTGCACATCAAACTGCCCCTGCTAAGCAAAGATAGCCGCTTCCCAAAGATCCTGGA 2472
Query 1038 GAACCTAAGACTCCAAAAGCGTGGTACTGGAGGAGTGGACACTGCTGCCACAGGCGGTGTCTTTGATATTTCTA 1111
||||||||||||||||||.|||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 2473 GAACCTAAGACTCCAAAAACGTGGTACTGGAGGAGTGGACACTGCTGCTACAGGCGGTGTCTTTGATATTTCTA 2546
Query 1112 ATTTGGACCGACTAGGCAAATCAGAGGTGGAGCTGGTGCAACTGGTCATCGATGGAGTAAACTATTTGATTGAT 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2547 ATTTGGACCGACTAGGCAAATCAGAGGTGGAGCTGGTGCAACTGGTCATCGATGGAGTAAACTATTTGATTGAT 2620
Query 1186 TGTGAACGGCGTCTGGAGAGAGGCCAGGATATCCGCATCCCCACACCTGTCATCCACACCAAGCAT-------- 1251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2621 TGTGAACGGCGTCTGGAGAGAGGCCAGGATATCCGCATCCCCACACCTGTCATCCACACCAAGCATTAACTCCC 2694
Query 1252 -------------------------------------------------------------------------- 1251
Sbjct 2695 CATCGCCAGCTGATGACTCAAGATTCCCAGGAGTTCTGCTCATTCTAATGATGGCCCATTCTACTTGCTCTGGA 2768
Query 1252 ---------------------------------------------------------------------- 1251
Sbjct 2769 CCTGCCCCCGCATCCCCTGCCTCCATCCTAGTAAAGACTCCTTGCTATGCTGCAAAAAAAAAAAAAAAAA 2838
