Nucleotide Global Alignment

Description

• Query: TRCN0000488054
• Subject: XM_017026990.1
• Aligned Length: 1398
• Identities: 991
• Gaps: 339

Alignment

Query    1  ATGCTGGCCCGGAGGAAGCCGGTGCTGCCGGCGCTCACCATCAACCCTACCATCGCCGAGGGCCCATCCCCTAC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCTGGCCCGGAGGAAGCCGGTGCTGCCGGCGCTCACCATCAACCCTACCATCGCCGAGGGCCCATCCCCTAC  74

Query   75  CAGCGAGGGCGCCTCCGAGGCAAACCTGGTGGACCTGCAGAAGAAGCTGGAGGAGCTGGAACTTGACGAGCAGC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CAGCGAGGGCGCCTCCGAGGCAAACCTGGTGGACCTGCAGAAGAAGCTGGAGGAGCTGGAACTTGACGAGCAGC  148

Query  149  AGAAGAAGCGGCTGGAAGCCTTTCTCACCCAGAAAGCCAAGGTCGGCGAACTCAAAGACGATGACTTCGAAAGG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGAAGAAGCGGCTGGAAGCCTTTCTCACCCAGAAAGCCAAGGTCGGCGAACTCAAAGACGATGACTTCGAAAGG  222

Query  223  ATCTCAGAGCTGGGCGCGGGCAACGGCGGGGTGGTCACCAAAGTCCAGCACAGACCCTCGGGCCTCATCATGGC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ATCTCAGAGCTGGGCGCGGGCAACGGCGGGGTGGTCACCAAAGTCCAGCACAGACCCTCGGGCCTCATCATGGC  296

Query  297  CAGGAAGCTGATCCACCTTGAGATCAAGCCGGCCATCCGGAACCAGATCATCCGCGAGCTGCAGGTCCTGCACG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CAGGAAGCTGATCCACCTTGAGATCAAGCCGGCCATCCGGAACCAGATCATCCGCGAGCTGCAGGTCCTGCACG  370

Query  371  AATGCAACTCGCCGTACATCGTGGGCTTCTACGGGGCCTTCTACAGTGACGGGGAGATCAGCATTTGCATGGAA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AATGCAACTCGCCGTACATCGTGGGCTTCTACGGGGCCTTCTACAGTGACGGGGAGATCAGCATTTGCATGGAA  444

Query  445  CACATGGACGGCGGCTCCCTGGACCAGGTGCTGAAAGAGGCCAAGAGGATTCCCGAGGAGATCCTGGGGAAAGT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CACATGGACGGCGGCTCCCTGGACCAGGTGCTGAAAGAGGCCAAGAGGATTCCCGAGGAGATCCTGGGGAAAGT  518

Query  519  CAGCATCGCGGTTCTCCGGGGCTTGGCGTACCTCCGAGAGAAGCACCAGATCATGCACCGAGATGTGAAGCCCT  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CAGCATCGCGGTTCTCCGGGGCTTGGCGTACCTCCGAGAGAAGCACCAGATCATGCACCGAGATGTGAAGCCCT  592

Query  593  CCAACATCCTCGTGAACTCTAGAGGGGAGATCAAGCTGTGTGACTTCGGGGTGAGCGGCCAGCTCATCGACTCC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCAACATCCTCGTGAACTCTAGAGGGGAGATCAAGCTGTGTGACTTCGGGGTGAGCGGCCAGCTCATCGACTCC  666

Query  667  ATGGCCAACTCCTTCGTGGGCACGCGCTCCTACATGGCTCCGGAGCGGTTGCAGGGCACACAT--TA--CT---  733
            ||||||||||||||||||||||||||||||||||||||||                  |||.|  ||  ||   
Sbjct  667  ATGGCCAACTCCTTCGTGGGCACGCGCTCCTACATGGCTC------------------CACCTCCTAAGCTGCC  722

Query  734  ---CGGTGCAGT------CGGACATCTGGAGCATGGGCCTGTCCCT-GGTGGAGCTGGCCGTCGGAAGGT----  793
               ||||| .||      |.|||.||     ||.|.|..||||..| ..|||..|||      |||.|||    
Sbjct  723  CAACGGTG-TGTTCACCCCCGACTTC-----CAGGAGTTTGTCAATAAATGGTTCTG------GGAGGGTCGCC  784

Query  794  ------ACCCCATCCCCCCGCCCGACGCCAAAG-----AGCTGGAGGCCATCTTTGGC--CGGC----------  844
                  ||.||||.|.||.|||     ||.|||     |||.|     ||.||.||||  .|||          
Sbjct  785  AGCCCCACTCCATTCTCCTGCC-----CCCAAGCACCCAGCAG-----CACCTGTGGCGTGGGCTTCACAGGCA  848

Query  845  ----CCGTGGTCGACGGGGAAGAA-----GGAGA-------GCCTCACAG--------CAT---------CTCG  885
                |||..|.|.|||||||||.|     |||.|       ||| |||||        |||         ||||
Sbjct  849  TGTGCCGCAGACCACGGGGAAGGAGCTGCGGACACCCCGCTGCC-CACAGGGCCGGTCCATGTGTGTGAGCTCG  921

Query  886  -------------------------CCTCG-GCC-GAGGCCCCCCGGGCGCCC----CGTCAGCGGTCACGG-G  927
                                     |||.| ||| |||...||||||  ||||    |||  |||.|| ||| |
Sbjct  922  GGACGCCGTGGAACGGCACCGCACTCCTGGTGCCGGAGTTGCCCCGG--GCCCTTGGCGT--GCGCTC-CGGCG  990

Query  928  ATGGATAGCC---GGCCTGCCATGGCCATCTTTGA----AC-----------------TCCTGGACTATATTGT  977
            |||  |.|||   ||||||    ||    .|||.|    ||                 |||.||     .||.|
Sbjct  991  ATG--TTGCCCCGGGCCTG----GG----GTTTTATTAGACAGTTAGCTGGGGTTGCGTCCAGG-----CTTCT  1049

Query  978  GA---ACGAG----------CCA-CCTC-------CTAA-------GCTGCCCAACGGTGTGTTCACCCCCGAC  1023
            ||   ||.||          ||| ||||       ||.|       ||||     .||.||||.|..||||   
Sbjct 1050  GACCCACCAGGCGGGGTTTCCCACCCTCTTTCCCTCTCACCCTCCCGCTG-----GGGGGTGTCCTGCCCC---  1115

Query 1024  TTCCAGGAGTTTGTCAATAA-------------ATGCCTCATCAAGAACCCAGC--GGAGCGGGCGGACCTGAA  1082
                       ||.||..||             ||.||||.||     |.|.||  |||   |||.||.|.|| 
Sbjct 1116  -----------TGGCACCAAAGTGCAGAGGTGGATCCCTCGTC-----CTCTGCCAGGA---GGCAGAACAGA-  1169

Query 1083  GATGCTCACAAACCA--------CACCTTCATCAAGCGGTCCGAGGTGGAAGAAGTGGATTTTGCCGGCTGGTT  1148
               ||     |.|||        |||..|| ||   .||||.|||     |||         |.|.|||     
Sbjct 1170  ---GC-----AGCCACTCTGTGCCACTCTC-TC---TGGTCGGAG-----AGA---------TCCAGGC-----  1212

Query 1149  GTGTAAAACCCTGCGGCTGAACCAGCCCGGCACACCCACGCG-------------CACC-GCCGTG  1200
                   .||||.||     ||||   ||||.||  ||||||             |||| ||    
Sbjct 1213  -------CCCCTCCG-----ACCA---CGGCCCA--CACGCGGGTGCCCCGGGGCCACCAGC----  1257