Nucleotide Global Alignment

Description

Query:
TRCN0000488055
Subject:
XR_243518.4
Aligned Length:
3982
Identities:
1244
Gaps:
2737

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACAGCGCGATGGCGGCGGCTCCTTTAGGCAGCTGAAAGGGGATTTAGGCCCGGAAGATCCGAGTCCATCCGCGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGGGGAGAGGGCAAGCGGGACCGGTAGGGGCCGGAGCAGCGGCGGCGGCGCTCGGACTGTCCCATCCGCCCCGT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ATTGAGGCGCTGGGAGCGGCGGGGCGACAGGAAAGCGATGGTGAAAGCGGGGCCGTGAGGGGGGCGGAGCCGGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AGCCGGACCCGCAGTAGCGGCAGCAGCGGCGCCGCCTCCCAGAGTTCAGACCCAGGAAGCGGCCGGGAGGGCAG  296

Query    1  -----------------------ATGGAGCTGAGAGTCGGGAACAGGTACCGGCTGGGCCGGAAGATCGGCAGC  51
                                   |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GAGCGAATCGGGCCGCCGCCGCCATGGAGCTGAGAGTCGGGAACAGGTACCGGCTGGGCCGGAAGATCGGCAGC  370

Query   52  GGCTCCTTCGGAGACATCTATCTCGGTACGGACATTGCTGCAGGAGAAGAGGTTGCCATCAAGCTTGAATGTGT  125
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GGCTCCTTCGGAGACATCTATCTCGGTACGGACATTGCTGCAGGAGAAGAGGTTGCCATCAAGCTTGAATGTGT  444

Query  126  CAAAACCAAACACCCTCAGCTCCACATTGAGAGCAAAATCTACAAGATGATGCAGGGAGGAGTGGGCATCCCCA  199
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CAAAACCAAACACCCTCAGCTCCACATTGAGAGCAAAATCTACAAGATGATGCAGGGAGGAGTGGGCATCCCCA  518

Query  200  CCATCAGATGGTGCGGGGCAGAGGGGGACTACAACGTCATGGTGATGGAGCTGCTGGGGCCAAGCCTGGAGGAC  273
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCATCAGATGGTGCGGGGCAGAGGGGGACTACAACGTCATGGTGATGGAGCTGCTGGGGCCAAGCCTGGAGGAC  592

Query  274  CTCTTCAACTTCTGCTCCAGGAAATTCAGCCTCAAAACCGTCCTGCTGCTTGCTGACCAAATGATCAGTCGCAT  347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CTCTTCAACTTCTGCTCCAGGAAATTCAGCCTCAAAACCGTCCTGCTGCTTGCTGACCAAATGATCAGTCGCAT  666

Query  348  CGAATACATTCATTCAAAGAACTTCATCCACCGGGATGTGAAGCCAGACAACTTCCTCATGGGCCTGGGGAAGA  421
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CGAATACATTCATTCAAAGAACTTCATCCACCGGGATGTGAAGCCAGACAACTTCCTCATGGGCCTGGGGAAGA  740

Query  422  AGGGCAACCTGGTGTACATCATCGACTTCGGGCTGGCCAAGAAGTACCGGGATGCACGCACCCACCAGCACATC  495
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AGGGCAACCTGGTGTACATCATCGACTTCGGGCTGGCCAAGAAGTACCGGGATGCACGCACCCACCAGCACATC  814

Query  496  CCCTATCGTGAGAACAAGAACCTCACGGGGACGGCGCGGTACGCCTCCATCAACACGCACCTTGGAATTGAACA  569
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CCCTATCGTGAGAACAAGAACCTCACGGGGACGGCGCGGTACGCCTCCATCAACACGCACCTTGGAATTGAACA  888

Query  570  ATCCCGAAGAGATGACTTGGAGTCTCTGGGCTACGTGCTAATGTACTTCAACCTGGGCTCTCTCCCCTGGCAGG  643
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  ATCCCGAAGAGATGACTTGGAGTCTCTGGGCTACGTGCTAATGTACTTCAACCTGGGCTCTCTCCCCTGGCAGG  962

Query  644  GGCTGAAGGCTGCCACCAAGAGACAGAAATACGAAAGGATTAGCGAGAAGAAAATGTCCACCCCCATCGAAGTG  717
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GGCTGAAGGCTGCCACCAAGAGACAGAAATACGAAAGGATTAGCGAGAAGAAAATGTCCACCCCCATCGAAGTG  1036

Query  718  TTGTGTAAAGGCTACCCTTCCGAATTTGCCACATACCTGAATTTCTGCCGTTCCTTGCGTTTTGACGACAAGCC  791
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TTGTGTAAAGGCTACCCTTCCGAATTTGCCACATACCTGAATTTCTGCCGTTCCTTGCGTTTTGACGACAAGCC  1110

Query  792  TGACTACTCGTACCTGCGGCAGCTTTTCCGGAATCTGTTCCATCGCCAGGGCTTCTCCTATGACTACGTGTTCG  865
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TGACTACTCGTACCTGCGGCAGCTTTTCCGGAATCTGTTCCATCGCCAGGGCTTCTCCTATGACTACGTGTTCG  1184

Query  866  ACTGGAACATGCTCAAATTTGGTGCCAGCCGGGCCGCCGATGACGCCGAGCGGGAGCGCAGGGACCGAGAGGAG  939
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  ACTGGAACATGCTCAAATTTGGTGCCAGCCGGGCCGCCGATGACGCCGAGCGGGAGCGCAGGGACCGAGAGGAG  1258

Query  940  CGGCTGAGACACTCGCGGAACCCGGCTACCCGCGGCCTCCCTTCCACAGCCTCCGGCCGCCTGCGGGGGACGCA  1013
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CGGCTGAGACACTCGCGGAACCCGGCTACCCGCGGCCTCCCTTCCACAGCCTCCGGCCGCCTGCGGGGGACGCA  1332

Query 1014  GGAAGTGGCTCCCCCCACACCCCTCACCCCTACCTCACACACGGCTAACACCTCCCCCCGGCCTGTCTCCGGCA  1087
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 1333  GGAAGTGGCTCCCCCCACACCCCTCACCCCTACCTCACACACGGCTAACACCTCCCCCCGGCCCGTCTCCGGCA  1406

Query 1088  TGGAGAGAGAGCGGAAAGTGAGTATGCGGCTGCACCGCGGGGCCCCCGTCAACATCTCCTCGTCCGACCTCACA  1161
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TGGAGAGAGAGCGGAAAGTGAGTATGCGGCTGCACCGCGGGGCCCCCGTCAACATCTCCTCGTCCGACCTCACA  1480

Query 1162  GGCCGACAAGATACCTCTCGCATGTCCACCTCACA---------------------------------------  1196
            |||||||||||||||||||||||||||||||||||                                       
Sbjct 1481  GGCCGACAAGATACCTCTCGCATGTCCACCTCACAGGACTAGGCCTGAGCCCTGTCGTCGTACCGGCGAGGATG  1554

Query 1197  --------------------------------------------------------------------------  1196
                                                                                      
Sbjct 1555  TGCGTCTCCCCTGCCTTCAGGCTGTGCCCTGAGACCCAGTTGTGGGGCTGCCCAGCACCTGCCATCCTGCTGGG  1628

Query 1197  --------------------------------------------------------------------------  1196
                                                                                      
Sbjct 1629  ATCAGGTTTTCTTAGTGCTTGAGAAGACTCAGGAGGGCCTGTCCCATGCCATTGTTGGCCTTAAGAGCAAGTGA  1702

Query 1197  --------------------------------------------------------------------------  1196
                                                                                      
Sbjct 1703  TTCCAGAAGAGGAGTGGGCACCACTCTCATCCAGAGGCCCGTCCTGAGAGAATAGCATTCCTTTCGAACACCAC  1776

Query 1197  ---------------------------------------GATTCCTGGTCGGGTGGCTTCCAGTGGTCTTCAGT  1231
                                                   |||||||||||||||||||||||||||||||||||
Sbjct 1777  GGCAAGTAGCTGCTCGTCTCCCATCGGAAGGCAGCACTGGATTCCTGGTCGGGTGGCTTCCAGTGGTCTTCAGT  1850

Query 1232  CTGTCGTGCACCGA------------------------------------------------------------  1245
            ||||||||||||||                                                            
Sbjct 1851  CTGTCGTGCACCGATGAGAACTCTCCTTATTGCTGTGAAGGGCAGACAATGCATGGCTGATCTACTCTGTTACC  1924

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 1925  AATGGCTTTACTAGTGACACGTCCCCCGGTCTAGGATCGAAATGTTAACACCGGGAGCTCTCCAGGCCACTCAC  1998

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 1999  CCAGCGACGCTCGTGGGGGAAACATACTAAACGGACAGACTCCAAGAGCTGCCACCGCTGGGGCTGCACTGCGG  2072

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2073  CCCCCCACGTGAACTCGGTTGTAACGGGGCTGGGAAGAAAAGCAGAGAGAGAATTGCAGAGAATCAGACTCCTT  2146

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2147  TTCCAGGGCCTCAGCTCCCTCCAGTGGTGGCCGCCCTGTACTCCCTGACGATTCCACTGTAACTACCAATCTTC  2220

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2221  TACTTGGTTAAGACAGTTTTGTATCATTTTGCTAAAAATTATTGGCTTAAATCTGTGTAAAGAAAATCTGTCTT  2294

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2295  TTTATTGTTTCTTGTCTGTTTTTGCAGTCTTACAAAAAAAATGTTGACTAAGGAATTCTGAGACAGGCTGGCTT  2368

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2369  GGAGTTAGTGTATGAGGTGGAGTCGGGCAGGGAGAAGGTGCAGGTGGATCTCAAGGGTGTGTGCTGTGTTTGTT  2442

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2443  TTGCAGTGTTTTATTGTCCGCTTTGGAGAGGAGATTTCTCATCAAAAGTCCGTGGTGTGTGTGTGTGCCCGTGT  2516

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2517  GTGGTGGGACCTCTTCAACCTGATTTTGGCGTCTCACCCTCCCTCCTCCCGTAATTGACATGCCTGCTGTCAGG  2590

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2591  AACTCTTGAGGCCCTCGGAGAGCAGTTAGGGACCGCAGGCTGCCGCGGGGCAGGGGTGCAGTGGGTGTTACCAG  2664

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2665  GCAAAGCACTGCGCGCTTCTTCCCCAGGAGGTGGGCAGGCAGCTGAGAGCTTGGAAGCAGAGGCTTTGAGACCC  2738

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2739  TAGCAGGACAATTGGGAGTCCCAGGATTCAAGGTGGAAGATGCGTTTCTGGTCCCTTGGGAGAGGACTGTGAAC  2812

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2813  CGAGAGGTGGTTACTGTAGTGTTTGTTGCCTTGCTGCCTTTGCACTCAGTCCATTTTCTCAGCACTCAATGCTC  2886

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2887  CTGTGCGGATTGGCACTCCGTCTGTATGAATGCCTGTGCTTAAAACCAGGAGCGGGGCTGTCCTTGCCACGTGC  2960

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 2961  CAAGACTAGCTCAGAAAAGCCGGCAGGCCAGAAGGACCCACCCTGAGGTGCCAAGGAGCAGGTGACTCTCCCAA  3034

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 3035  CCGGACCCAGAACCTTCACGGCCAGAAAGTAGAGTCTGCGCTGTGACCTTCTGTTGGGCGCGTGTCTGTTGGTC  3108

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 3109  AGAAGTGAAGCAGCGTGCGTGGGGCCGAGTCCCACCAGAAGGCAGGTGGCCTCCGTGAGCTGGTGCTGCCCCAG  3182

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 3183  GCTCCATGCTGCTGTGCCCTGAGGTTCCCAGGATGCCTTCTCGCCTCTCACTCCGCAGCACTTGGGCGGTAGCC  3256

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 3257  AGTGGCCATGTGCTCCCAACCCCAATGCGCAGGGCAGTCTGTGTTCGTGGGCACTTCGGCTGGACCCCATCACG  3330

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 3331  ATGGACGATGTTCCCTTTGGACTCTAGGGCTTCGAAGGTGTGCACCTTGGTTCTCCCTTCTCCTCCCCAGAGTT  3404

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 3405  CCCCGGATGCCATAACTGGCTGGCGTCCCAGAACACAGTTGTTCACCCCCCCACCAGCTGGCTGGCCGTCTGCC  3478

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 3479  TGAGCCCATGGATGCTTTCTCAATCCTAGGCTGGTTACTGTGTAAGCGTTTTGGAGTACGGGGCCTTGAGCGGG  3552

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 3553  TGGGAGCTGTGTGTTGAAGTACAGAGGGAGGTTGGGGTGGGTCAGAGCCGAGTTAAGAGATTTTCTTTGTTGCT  3626

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 3627  GGACCCCTTCTTGAAGGTAGACGTCCCCCACCCGGAGAGACGTCGCGCTGTGGCCTGAAGTGGCGCAAGCTTGC  3700

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 3701  TTTGTAAATATCTGTGGTCCCGATGTAGTGCCCAGAACGTTTGTGCGAGGCAGCTCTGCGCCCGGGTTCCAGCC  3774

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 3775  CGAGCCTCGCCGGGTCGCGTCTTCGGAGTGCTTGTGACAGTCCTTGCCCAGTATCTAGTCCCCGTCGCCCCGTG  3848

Query 1246  --------------------------------------------------------------------------  1245
                                                                                      
Sbjct 3849  CAGGAGACGTAGGTAGGACGTCGTGTCAGCTGTGCACTGACGGCCAGTCTCCGAGCTGTGCGTTTGTATCGCCA  3922

Query 1246  ------------------------------------------------------------  1245
                                                                        
Sbjct 3923  CTGTATTTGTGTACTTTAACAATCGTGTAAATAATAAATTCATAATGACTTCTACCTTTC  3982

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