Nucleotide Global Alignment
Description
- Query:
- TRCN0000488055
- Subject:
- XR_243518.4
- Aligned Length:
- 3982
- Identities:
- 1244
- Gaps:
- 2737
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACAGCGCGATGGCGGCGGCTCCTTTAGGCAGCTGAAAGGGGATTTAGGCCCGGAAGATCCGAGTCCATCCGCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGGGAGAGGGCAAGCGGGACCGGTAGGGGCCGGAGCAGCGGCGGCGGCGCTCGGACTGTCCCATCCGCCCCGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATTGAGGCGCTGGGAGCGGCGGGGCGACAGGAAAGCGATGGTGAAAGCGGGGCCGTGAGGGGGGCGGAGCCGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGCCGGACCCGCAGTAGCGGCAGCAGCGGCGCCGCCTCCCAGAGTTCAGACCCAGGAAGCGGCCGGGAGGGCAG 296
Query 1 -----------------------ATGGAGCTGAGAGTCGGGAACAGGTACCGGCTGGGCCGGAAGATCGGCAGC 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GAGCGAATCGGGCCGCCGCCGCCATGGAGCTGAGAGTCGGGAACAGGTACCGGCTGGGCCGGAAGATCGGCAGC 370
Query 52 GGCTCCTTCGGAGACATCTATCTCGGTACGGACATTGCTGCAGGAGAAGAGGTTGCCATCAAGCTTGAATGTGT 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGCTCCTTCGGAGACATCTATCTCGGTACGGACATTGCTGCAGGAGAAGAGGTTGCCATCAAGCTTGAATGTGT 444
Query 126 CAAAACCAAACACCCTCAGCTCCACATTGAGAGCAAAATCTACAAGATGATGCAGGGAGGAGTGGGCATCCCCA 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CAAAACCAAACACCCTCAGCTCCACATTGAGAGCAAAATCTACAAGATGATGCAGGGAGGAGTGGGCATCCCCA 518
Query 200 CCATCAGATGGTGCGGGGCAGAGGGGGACTACAACGTCATGGTGATGGAGCTGCTGGGGCCAAGCCTGGAGGAC 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCATCAGATGGTGCGGGGCAGAGGGGGACTACAACGTCATGGTGATGGAGCTGCTGGGGCCAAGCCTGGAGGAC 592
Query 274 CTCTTCAACTTCTGCTCCAGGAAATTCAGCCTCAAAACCGTCCTGCTGCTTGCTGACCAAATGATCAGTCGCAT 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTCTTCAACTTCTGCTCCAGGAAATTCAGCCTCAAAACCGTCCTGCTGCTTGCTGACCAAATGATCAGTCGCAT 666
Query 348 CGAATACATTCATTCAAAGAACTTCATCCACCGGGATGTGAAGCCAGACAACTTCCTCATGGGCCTGGGGAAGA 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CGAATACATTCATTCAAAGAACTTCATCCACCGGGATGTGAAGCCAGACAACTTCCTCATGGGCCTGGGGAAGA 740
Query 422 AGGGCAACCTGGTGTACATCATCGACTTCGGGCTGGCCAAGAAGTACCGGGATGCACGCACCCACCAGCACATC 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGGGCAACCTGGTGTACATCATCGACTTCGGGCTGGCCAAGAAGTACCGGGATGCACGCACCCACCAGCACATC 814
Query 496 CCCTATCGTGAGAACAAGAACCTCACGGGGACGGCGCGGTACGCCTCCATCAACACGCACCTTGGAATTGAACA 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCCTATCGTGAGAACAAGAACCTCACGGGGACGGCGCGGTACGCCTCCATCAACACGCACCTTGGAATTGAACA 888
Query 570 ATCCCGAAGAGATGACTTGGAGTCTCTGGGCTACGTGCTAATGTACTTCAACCTGGGCTCTCTCCCCTGGCAGG 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ATCCCGAAGAGATGACTTGGAGTCTCTGGGCTACGTGCTAATGTACTTCAACCTGGGCTCTCTCCCCTGGCAGG 962
Query 644 GGCTGAAGGCTGCCACCAAGAGACAGAAATACGAAAGGATTAGCGAGAAGAAAATGTCCACCCCCATCGAAGTG 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGCTGAAGGCTGCCACCAAGAGACAGAAATACGAAAGGATTAGCGAGAAGAAAATGTCCACCCCCATCGAAGTG 1036
Query 718 TTGTGTAAAGGCTACCCTTCCGAATTTGCCACATACCTGAATTTCTGCCGTTCCTTGCGTTTTGACGACAAGCC 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TTGTGTAAAGGCTACCCTTCCGAATTTGCCACATACCTGAATTTCTGCCGTTCCTTGCGTTTTGACGACAAGCC 1110
Query 792 TGACTACTCGTACCTGCGGCAGCTTTTCCGGAATCTGTTCCATCGCCAGGGCTTCTCCTATGACTACGTGTTCG 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TGACTACTCGTACCTGCGGCAGCTTTTCCGGAATCTGTTCCATCGCCAGGGCTTCTCCTATGACTACGTGTTCG 1184
Query 866 ACTGGAACATGCTCAAATTTGGTGCCAGCCGGGCCGCCGATGACGCCGAGCGGGAGCGCAGGGACCGAGAGGAG 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ACTGGAACATGCTCAAATTTGGTGCCAGCCGGGCCGCCGATGACGCCGAGCGGGAGCGCAGGGACCGAGAGGAG 1258
Query 940 CGGCTGAGACACTCGCGGAACCCGGCTACCCGCGGCCTCCCTTCCACAGCCTCCGGCCGCCTGCGGGGGACGCA 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CGGCTGAGACACTCGCGGAACCCGGCTACCCGCGGCCTCCCTTCCACAGCCTCCGGCCGCCTGCGGGGGACGCA 1332
Query 1014 GGAAGTGGCTCCCCCCACACCCCTCACCCCTACCTCACACACGGCTAACACCTCCCCCCGGCCTGTCTCCGGCA 1087
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 1333 GGAAGTGGCTCCCCCCACACCCCTCACCCCTACCTCACACACGGCTAACACCTCCCCCCGGCCCGTCTCCGGCA 1406
Query 1088 TGGAGAGAGAGCGGAAAGTGAGTATGCGGCTGCACCGCGGGGCCCCCGTCAACATCTCCTCGTCCGACCTCACA 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TGGAGAGAGAGCGGAAAGTGAGTATGCGGCTGCACCGCGGGGCCCCCGTCAACATCTCCTCGTCCGACCTCACA 1480
Query 1162 GGCCGACAAGATACCTCTCGCATGTCCACCTCACA--------------------------------------- 1196
|||||||||||||||||||||||||||||||||||
Sbjct 1481 GGCCGACAAGATACCTCTCGCATGTCCACCTCACAGGACTAGGCCTGAGCCCTGTCGTCGTACCGGCGAGGATG 1554
Query 1197 -------------------------------------------------------------------------- 1196
Sbjct 1555 TGCGTCTCCCCTGCCTTCAGGCTGTGCCCTGAGACCCAGTTGTGGGGCTGCCCAGCACCTGCCATCCTGCTGGG 1628
Query 1197 -------------------------------------------------------------------------- 1196
Sbjct 1629 ATCAGGTTTTCTTAGTGCTTGAGAAGACTCAGGAGGGCCTGTCCCATGCCATTGTTGGCCTTAAGAGCAAGTGA 1702
Query 1197 -------------------------------------------------------------------------- 1196
Sbjct 1703 TTCCAGAAGAGGAGTGGGCACCACTCTCATCCAGAGGCCCGTCCTGAGAGAATAGCATTCCTTTCGAACACCAC 1776
Query 1197 ---------------------------------------GATTCCTGGTCGGGTGGCTTCCAGTGGTCTTCAGT 1231
|||||||||||||||||||||||||||||||||||
Sbjct 1777 GGCAAGTAGCTGCTCGTCTCCCATCGGAAGGCAGCACTGGATTCCTGGTCGGGTGGCTTCCAGTGGTCTTCAGT 1850
Query 1232 CTGTCGTGCACCGA------------------------------------------------------------ 1245
||||||||||||||
Sbjct 1851 CTGTCGTGCACCGATGAGAACTCTCCTTATTGCTGTGAAGGGCAGACAATGCATGGCTGATCTACTCTGTTACC 1924
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 1925 AATGGCTTTACTAGTGACACGTCCCCCGGTCTAGGATCGAAATGTTAACACCGGGAGCTCTCCAGGCCACTCAC 1998
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 1999 CCAGCGACGCTCGTGGGGGAAACATACTAAACGGACAGACTCCAAGAGCTGCCACCGCTGGGGCTGCACTGCGG 2072
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2073 CCCCCCACGTGAACTCGGTTGTAACGGGGCTGGGAAGAAAAGCAGAGAGAGAATTGCAGAGAATCAGACTCCTT 2146
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2147 TTCCAGGGCCTCAGCTCCCTCCAGTGGTGGCCGCCCTGTACTCCCTGACGATTCCACTGTAACTACCAATCTTC 2220
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2221 TACTTGGTTAAGACAGTTTTGTATCATTTTGCTAAAAATTATTGGCTTAAATCTGTGTAAAGAAAATCTGTCTT 2294
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2295 TTTATTGTTTCTTGTCTGTTTTTGCAGTCTTACAAAAAAAATGTTGACTAAGGAATTCTGAGACAGGCTGGCTT 2368
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2369 GGAGTTAGTGTATGAGGTGGAGTCGGGCAGGGAGAAGGTGCAGGTGGATCTCAAGGGTGTGTGCTGTGTTTGTT 2442
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2443 TTGCAGTGTTTTATTGTCCGCTTTGGAGAGGAGATTTCTCATCAAAAGTCCGTGGTGTGTGTGTGTGCCCGTGT 2516
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2517 GTGGTGGGACCTCTTCAACCTGATTTTGGCGTCTCACCCTCCCTCCTCCCGTAATTGACATGCCTGCTGTCAGG 2590
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2591 AACTCTTGAGGCCCTCGGAGAGCAGTTAGGGACCGCAGGCTGCCGCGGGGCAGGGGTGCAGTGGGTGTTACCAG 2664
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2665 GCAAAGCACTGCGCGCTTCTTCCCCAGGAGGTGGGCAGGCAGCTGAGAGCTTGGAAGCAGAGGCTTTGAGACCC 2738
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2739 TAGCAGGACAATTGGGAGTCCCAGGATTCAAGGTGGAAGATGCGTTTCTGGTCCCTTGGGAGAGGACTGTGAAC 2812
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2813 CGAGAGGTGGTTACTGTAGTGTTTGTTGCCTTGCTGCCTTTGCACTCAGTCCATTTTCTCAGCACTCAATGCTC 2886
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2887 CTGTGCGGATTGGCACTCCGTCTGTATGAATGCCTGTGCTTAAAACCAGGAGCGGGGCTGTCCTTGCCACGTGC 2960
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2961 CAAGACTAGCTCAGAAAAGCCGGCAGGCCAGAAGGACCCACCCTGAGGTGCCAAGGAGCAGGTGACTCTCCCAA 3034
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3035 CCGGACCCAGAACCTTCACGGCCAGAAAGTAGAGTCTGCGCTGTGACCTTCTGTTGGGCGCGTGTCTGTTGGTC 3108
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3109 AGAAGTGAAGCAGCGTGCGTGGGGCCGAGTCCCACCAGAAGGCAGGTGGCCTCCGTGAGCTGGTGCTGCCCCAG 3182
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3183 GCTCCATGCTGCTGTGCCCTGAGGTTCCCAGGATGCCTTCTCGCCTCTCACTCCGCAGCACTTGGGCGGTAGCC 3256
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3257 AGTGGCCATGTGCTCCCAACCCCAATGCGCAGGGCAGTCTGTGTTCGTGGGCACTTCGGCTGGACCCCATCACG 3330
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3331 ATGGACGATGTTCCCTTTGGACTCTAGGGCTTCGAAGGTGTGCACCTTGGTTCTCCCTTCTCCTCCCCAGAGTT 3404
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3405 CCCCGGATGCCATAACTGGCTGGCGTCCCAGAACACAGTTGTTCACCCCCCCACCAGCTGGCTGGCCGTCTGCC 3478
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3479 TGAGCCCATGGATGCTTTCTCAATCCTAGGCTGGTTACTGTGTAAGCGTTTTGGAGTACGGGGCCTTGAGCGGG 3552
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3553 TGGGAGCTGTGTGTTGAAGTACAGAGGGAGGTTGGGGTGGGTCAGAGCCGAGTTAAGAGATTTTCTTTGTTGCT 3626
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3627 GGACCCCTTCTTGAAGGTAGACGTCCCCCACCCGGAGAGACGTCGCGCTGTGGCCTGAAGTGGCGCAAGCTTGC 3700
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3701 TTTGTAAATATCTGTGGTCCCGATGTAGTGCCCAGAACGTTTGTGCGAGGCAGCTCTGCGCCCGGGTTCCAGCC 3774
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3775 CGAGCCTCGCCGGGTCGCGTCTTCGGAGTGCTTGTGACAGTCCTTGCCCAGTATCTAGTCCCCGTCGCCCCGTG 3848
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3849 CAGGAGACGTAGGTAGGACGTCGTGTCAGCTGTGCACTGACGGCCAGTCTCCGAGCTGTGCGTTTGTATCGCCA 3922
Query 1246 ------------------------------------------------------------ 1245
Sbjct 3923 CTGTATTTGTGTACTTTAACAATCGTGTAAATAATAAATTCATAATGACTTCTACCTTTC 3982
