Construct: ORF TRCN0000488055

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF020259.1_s317c1
DNA Barcode:
CATAGAACCCGCCGCCGAGCCGTC
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Has stop codon in insert

Originally Annotated References:

Gene:
CSNK1D (1453)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000488055
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1453 CSNK1D casein kinase 1 delta NM_001893.6 99.9% 100% 1077C>T
2 human 1453 CSNK1D casein kinase 1 delta NM_139062.4 96.8% 95.4% (many diffs)
3 human 1453 CSNK1D casein kinase 1 delta NM_001363749.2 94.8% 94.1% (many diffs)
4 human 1453 CSNK1D casein kinase 1 delta XM_005256336.4 91.1% 89.7% (many diffs)
5 human 102800317 TPTEP2-CSNK1E TPTEP2-CSNK1E readthrough NM_001289912.2 76.9% 81% (many diffs)
6 human 1454 CSNK1E casein kinase 1 epsilon NM_001894.4 76.9% 81% (many diffs)
7 human 1454 CSNK1E casein kinase 1 epsilon NM_152221.3 76.9% 81% (many diffs)
8 human 1453 CSNK1D casein kinase 1 delta XR_243518.4 31.2% (many diffs)
9 human 1453 CSNK1D casein kinase 1 delta XR_933922.3 30.9% (many diffs)
10 human 1453 CSNK1D casein kinase 1 delta XR_430028.4 29.4% (many diffs)
11 human 1453 CSNK1D casein kinase 1 delta XR_002957961.1 29.2% (many diffs)
12 human 1453 CSNK1D casein kinase 1 delta XR_933923.3 27.8% (many diffs)
13 human 1453 CSNK1D casein kinase 1 delta NR_110578.2 26.7% (many diffs)
14 mouse 104318 Csnk1d casein kinase 1, delta NM_139059.2 90.2% 99.7% (many diffs)
15 mouse 104318 Csnk1d casein kinase 1, delta NM_027874.2 87.2% 95.2% (many diffs)
16 mouse 104318 Csnk1d casein kinase 1, delta XM_011248662.1 85.1% 93.6% (many diffs)
17 mouse 104318 Csnk1d casein kinase 1, delta XM_011248663.2 85.1% 93.6% (many diffs)
18 mouse 27373 Csnk1e casein kinase 1, epsilon NM_001289899.1 70.6% 70.2% (many diffs)
19 mouse 27373 Csnk1e casein kinase 1, epsilon XM_017316660.1 70.6% 70.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
72
ORF end:
1317
ORF length:
1245
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcttcac catggagctg agagtcggga acaggtaccg gctgggccgg aagatcggca
121gcggctcctt cggagacatc tatctcggta cggacattgc tgcaggagaa gaggttgcca
181tcaagcttga atgtgtcaaa accaaacacc ctcagctcca cattgagagc aaaatctaca
241agatgatgca gggaggagtg ggcatcccca ccatcagatg gtgcggggca gagggggact
301acaacgtcat ggtgatggag ctgctggggc caagcctgga ggacctcttc aacttctgct
361ccaggaaatt cagcctcaaa accgtcctgc tgcttgctga ccaaatgatc agtcgcatcg
421aatacattca ttcaaagaac ttcatccacc gggatgtgaa gccagacaac ttcctcatgg
481gcctggggaa gaagggcaac ctggtgtaca tcatcgactt cgggctggcc aagaagtacc
541gggatgcacg cacccaccag cacatcccct atcgtgagaa caagaacctc acggggacgg
601cgcggtacgc ctccatcaac acgcaccttg gaattgaaca atcccgaaga gatgacttgg
661agtctctggg ctacgtgcta atgtacttca acctgggctc tctcccctgg caggggctga
721aggctgccac caagagacag aaatacgaaa ggattagcga gaagaaaatg tccaccccca
781tcgaagtgtt gtgtaaaggc tacccttccg aatttgccac atacctgaat ttctgccgtt
841ccttgcgttt tgacgacaag cctgactact cgtacctgcg gcagcttttc cggaatctgt
901tccatcgcca gggcttctcc tatgactacg tgttcgactg gaacatgctc aaatttggtg
961ccagccgggc cgccgatgac gccgagcggg agcgcaggga ccgagaggag cggctgagac
1021actcgcggaa cccggctacc cgcggcctcc cttccacagc ctccggccgc ctgcggggga
1081cgcaggaagt ggctcccccc acaccccTCA CCCCTACCTC ACACACGGCT AACACCTCCC
1141CCCGGCCTGT CTCCGGCATG GAGAGAGAGC GGAAAGTGAG TATGCGGCTG CACCGCGGGG
1201CCCCCGTCAA CATCTCCTCG TCCGACCTCA CAGGCCGACA AGATACCTCT CGCATGTCCA
1261CCTCACAGAT TCCTGGTCGG GTGGCTTCCA GTGGTCTTCA GTCTGTCGTG CACCGATGAG
1321ACCCAGCTTT CTTGTACAAA GTGGTTGATA TCGGTAAGCC TATCCCTAAC CCTCTCCTCG
1381GTCTCGATTC TACGTAGTAA TGAACTAGTC CGTAACTTGA AAGTATTTCG ATTTCTTGGC
1441TTTATATATC TTGTGGAAAG GACGACATAG AACCCGCCGC CGAGCCGTCA CGCGTTAAGT
1501Cgacaatcaa cctctggatt acaaaatttg tgaaagatt

Download FASTA (ORF) (Full)

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.