Nucleotide Global Alignment
Description
- Query:
- TRCN0000488055
- Subject:
- XR_933922.3
- Aligned Length:
- 4014
- Identities:
- 1244
- Gaps:
- 2769
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACAGCGCGATGGCGGCGGCTCCTTTAGGCAGCTGAAAGGGGATTTAGGCCCGGAAGATCCGAGTCCATCCGCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGGGAGAGGGCAAGCGGGACCGGTAGGGGCCGGAGCAGCGGCGGCGGCGCTCGGACTGTCCCATCCGCCCCGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATTGAGGCGCTGGGAGCGGCGGGGCGACAGGAAAGCGATGGTGAAAGCGGGGCCGTGAGGGGGGCGGAGCCGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGCCGGACCCGCAGTAGCGGCAGCAGCGGCGCCGCCTCCCAGAGTTCAGACCCAGGAAGCGGCCGGGAGGGCAG 296
Query 1 -----------------------ATGGAGCTGAGAGTCGGGAACAGGTACCGGCTGGGCCGGAAGATCGGCAGC 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GAGCGAATCGGGCCGCCGCCGCCATGGAGCTGAGAGTCGGGAACAGGTACCGGCTGGGCCGGAAGATCGGCAGC 370
Query 52 GGCTCCTTCGGAGACATCTATCTCGGTACGGACATTGCTGCAGGAGAAGAGGTTGCCATCAAGCTTGAATGTGT 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGCTCCTTCGGAGACATCTATCTCGGTACGGACATTGCTGCAGGAGAAGAGGTTGCCATCAAGCTTGAATGTGT 444
Query 126 CAAAACCAAACACCCTCAGCTCCACATTGAGAGCAAAATCTACAAGATGATGCAGGGAGGAGTGGGCATCCCCA 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CAAAACCAAACACCCTCAGCTCCACATTGAGAGCAAAATCTACAAGATGATGCAGGGAGGAGTGGGCATCCCCA 518
Query 200 CCATCAGATGGTGCGGGGCAGAGGGGGACTACAACGTCATGGTGATGGAGCTGCTGGGGCCAAGCCTGGAGGAC 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCATCAGATGGTGCGGGGCAGAGGGGGACTACAACGTCATGGTGATGGAGCTGCTGGGGCCAAGCCTGGAGGAC 592
Query 274 CTCTTCAACTTCTGCTCCAGGAAATTCAGCCTCAAAACCGTCCTGCTGCTTGCTGACCAAATGATCAGTCGCAT 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTCTTCAACTTCTGCTCCAGGAAATTCAGCCTCAAAACCGTCCTGCTGCTTGCTGACCAAATGATCAGTCGCAT 666
Query 348 CGAATACATTCATTCAAAGAACTTCATCCACCGGGATGTGAAGCCAGACAACTTCCTCATGGGCCTGGGGAAGA 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CGAATACATTCATTCAAAGAACTTCATCCACCGGGATGTGAAGCCAGACAACTTCCTCATGGGCCTGGGGAAGA 740
Query 422 AGGGCAACCTGGTGTACATCATCGACTTCGGGCTGGCCAAGAAGTACCGGGATGCACGCACCCACCAGCACATC 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGGGCAACCTGGTGTACATCATCGACTTCGGGCTGGCCAAGAAGTACCGGGATGCACGCACCCACCAGCACATC 814
Query 496 CCCTATCGTGAGAACAAGAACCTCACGGGGACGGCGCGGTACGCCTCCATCAACACGCACCTTGGAATTGAACA 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCCTATCGTGAGAACAAGAACCTCACGGGGACGGCGCGGTACGCCTCCATCAACACGCACCTTGGAATTGAACA 888
Query 570 ATCCCGAAGAGATGACTTGGAGTCTCTGGGCTACGTGCTAATGTACTTCAACCTGGGCTCTCTCCCCTGGCAGG 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ATCCCGAAGAGATGACTTGGAGTCTCTGGGCTACGTGCTAATGTACTTCAACCTGGGCTCTCTCCCCTGGCAGG 962
Query 644 GGCTGAAGGCTGCCACCAAGAGACAGAAATACGAAAGGATTAGCGAGAAGAAAATGTCCACCCCCATCGAAGTG 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGCTGAAGGCTGCCACCAAGAGACAGAAATACGAAAGGATTAGCGAGAAGAAAATGTCCACCCCCATCGAAGTG 1036
Query 718 TTGTGTAAAGGCTACCCTTCCGAATTTGCCACATACCTGAATTTCTGCCGTTCCTTGCGTTTTGACGACAAGCC 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TTGTGTAAAGGCTACCCTTCCGAATTTGCCACATACCTGAATTTCTGCCGTTCCTTGCGTTTTGACGACAAGCC 1110
Query 792 TGACTACTCGTACCTGCGGCAGCTTTTCCGGAATCTGTTCCATCGCCAGGGCTTCTCCTATGACTACGTGTTCG 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TGACTACTCGTACCTGCGGCAGCTTTTCCGGAATCTGTTCCATCGCCAGGGCTTCTCCTATGACTACGTGTTCG 1184
Query 866 ACTGGAACATGCTCAAATTTGGTGCCAGCCGGGCCGCCGATGACGCCGAGCGGGAGCGCAGGGACCGAGAGGAG 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ACTGGAACATGCTCAAATTTGGTGCCAGCCGGGCCGCCGATGACGCCGAGCGGGAGCGCAGGGACCGAGAGGAG 1258
Query 940 CGGCTGAGACACTCGCGGAACCCGGCTACCCGCGGCCTCCCTTCCACAGCCTCCGGCCGCCTGCGGGGGACGCA 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CGGCTGAGACACTCGCGGAACCCGGCTACCCGCGGCCTCCCTTCCACAGCCTCCGGCCGCCTGCGGGGGACGCA 1332
Query 1014 GGAAGTGGCTCCCCCCACACCCCTCACCCCTACCTCACACACGGCTAACACCTCCCCCCGGCCTGTCTCCGGCA 1087
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 1333 GGAAGTGGCTCCCCCCACACCCCTCACCCCTACCTCACACACGGCTAACACCTCCCCCCGGCCCGTCTCCGGCA 1406
Query 1088 TGGAGAGAGAGCGGAAAGTGAGTATGCGGCTGCACCGCGGGGCCCCCGTCAACATCTCCTCGTCCGACCTCACA 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TGGAGAGAGAGCGGAAAGTGAGTATGCGGCTGCACCGCGGGGCCCCCGTCAACATCTCCTCGTCCGACCTCACA 1480
Query 1162 GGCCGACAAGATACCTCTCGCATGTCCACCTCACA--------------------------------------- 1196
|||||||||||||||||||||||||||||||||||
Sbjct 1481 GGCCGACAAGATACCTCTCGCATGTCCACCTCACAGTCGATGACTCGCTTTGATCAACTCCTGCCCAGGACTAG 1554
Query 1197 -------------------------------------------------------------------------- 1196
Sbjct 1555 GCCTGAGCCCTGTCGTCGTACCGGCGAGGATGTGCGTCTCCCCTGCCTTCAGGCTGTGCCCTGAGACCCAGTTG 1628
Query 1197 -------------------------------------------------------------------------- 1196
Sbjct 1629 TGGGGCTGCCCAGCACCTGCCATCCTGCTGGGATCAGGTTTTCTTAGTGCTTGAGAAGACTCAGGAGGGCCTGT 1702
Query 1197 -------------------------------------------------------------------------- 1196
Sbjct 1703 CCCATGCCATTGTTGGCCTTAAGAGCAAGTGATTCCAGAAGAGGAGTGGGCACCACTCTCATCCAGAGGCCCGT 1776
Query 1197 -----------------------------------------------------------------------GAT 1199
|||
Sbjct 1777 CCTGAGAGAATAGCATTCCTTTCGAACACCACGGCAAGTAGCTGCTCGTCTCCCATCGGAAGGCAGCACTGGAT 1850
Query 1200 TCCTGGTCGGGTGGCTTCCAGTGGTCTTCAGTCTGTCGTGCACCGA---------------------------- 1245
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TCCTGGTCGGGTGGCTTCCAGTGGTCTTCAGTCTGTCGTGCACCGATGAGAACTCTCCTTATTGCTGTGAAGGG 1924
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 1925 CAGACAATGCATGGCTGATCTACTCTGTTACCAATGGCTTTACTAGTGACACGTCCCCCGGTCTAGGATCGAAA 1998
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 1999 TGTTAACACCGGGAGCTCTCCAGGCCACTCACCCAGCGACGCTCGTGGGGGAAACATACTAAACGGACAGACTC 2072
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2073 CAAGAGCTGCCACCGCTGGGGCTGCACTGCGGCCCCCCACGTGAACTCGGTTGTAACGGGGCTGGGAAGAAAAG 2146
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2147 CAGAGAGAGAATTGCAGAGAATCAGACTCCTTTTCCAGGGCCTCAGCTCCCTCCAGTGGTGGCCGCCCTGTACT 2220
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2221 CCCTGACGATTCCACTGTAACTACCAATCTTCTACTTGGTTAAGACAGTTTTGTATCATTTTGCTAAAAATTAT 2294
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2295 TGGCTTAAATCTGTGTAAAGAAAATCTGTCTTTTTATTGTTTCTTGTCTGTTTTTGCAGTCTTACAAAAAAAAT 2368
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2369 GTTGACTAAGGAATTCTGAGACAGGCTGGCTTGGAGTTAGTGTATGAGGTGGAGTCGGGCAGGGAGAAGGTGCA 2442
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2443 GGTGGATCTCAAGGGTGTGTGCTGTGTTTGTTTTGCAGTGTTTTATTGTCCGCTTTGGAGAGGAGATTTCTCAT 2516
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2517 CAAAAGTCCGTGGTGTGTGTGTGTGCCCGTGTGTGGTGGGACCTCTTCAACCTGATTTTGGCGTCTCACCCTCC 2590
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2591 CTCCTCCCGTAATTGACATGCCTGCTGTCAGGAACTCTTGAGGCCCTCGGAGAGCAGTTAGGGACCGCAGGCTG 2664
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2665 CCGCGGGGCAGGGGTGCAGTGGGTGTTACCAGGCAAAGCACTGCGCGCTTCTTCCCCAGGAGGTGGGCAGGCAG 2738
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2739 CTGAGAGCTTGGAAGCAGAGGCTTTGAGACCCTAGCAGGACAATTGGGAGTCCCAGGATTCAAGGTGGAAGATG 2812
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2813 CGTTTCTGGTCCCTTGGGAGAGGACTGTGAACCGAGAGGTGGTTACTGTAGTGTTTGTTGCCTTGCTGCCTTTG 2886
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2887 CACTCAGTCCATTTTCTCAGCACTCAATGCTCCTGTGCGGATTGGCACTCCGTCTGTATGAATGCCTGTGCTTA 2960
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 2961 AAACCAGGAGCGGGGCTGTCCTTGCCACGTGCCAAGACTAGCTCAGAAAAGCCGGCAGGCCAGAAGGACCCACC 3034
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3035 CTGAGGTGCCAAGGAGCAGGTGACTCTCCCAACCGGACCCAGAACCTTCACGGCCAGAAAGTAGAGTCTGCGCT 3108
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3109 GTGACCTTCTGTTGGGCGCGTGTCTGTTGGTCAGAAGTGAAGCAGCGTGCGTGGGGCCGAGTCCCACCAGAAGG 3182
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3183 CAGGTGGCCTCCGTGAGCTGGTGCTGCCCCAGGCTCCATGCTGCTGTGCCCTGAGGTTCCCAGGATGCCTTCTC 3256
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3257 GCCTCTCACTCCGCAGCACTTGGGCGGTAGCCAGTGGCCATGTGCTCCCAACCCCAATGCGCAGGGCAGTCTGT 3330
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3331 GTTCGTGGGCACTTCGGCTGGACCCCATCACGATGGACGATGTTCCCTTTGGACTCTAGGGCTTCGAAGGTGTG 3404
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3405 CACCTTGGTTCTCCCTTCTCCTCCCCAGAGTTCCCCGGATGCCATAACTGGCTGGCGTCCCAGAACACAGTTGT 3478
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3479 TCACCCCCCCACCAGCTGGCTGGCCGTCTGCCTGAGCCCATGGATGCTTTCTCAATCCTAGGCTGGTTACTGTG 3552
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3553 TAAGCGTTTTGGAGTACGGGGCCTTGAGCGGGTGGGAGCTGTGTGTTGAAGTACAGAGGGAGGTTGGGGTGGGT 3626
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3627 CAGAGCCGAGTTAAGAGATTTTCTTTGTTGCTGGACCCCTTCTTGAAGGTAGACGTCCCCCACCCGGAGAGACG 3700
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3701 TCGCGCTGTGGCCTGAAGTGGCGCAAGCTTGCTTTGTAAATATCTGTGGTCCCGATGTAGTGCCCAGAACGTTT 3774
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3775 GTGCGAGGCAGCTCTGCGCCCGGGTTCCAGCCCGAGCCTCGCCGGGTCGCGTCTTCGGAGTGCTTGTGACAGTC 3848
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3849 CTTGCCCAGTATCTAGTCCCCGTCGCCCCGTGCAGGAGACGTAGGTAGGACGTCGTGTCAGCTGTGCACTGACG 3922
Query 1246 -------------------------------------------------------------------------- 1245
Sbjct 3923 GCCAGTCTCCGAGCTGTGCGTTTGTATCGCCACTGTATTTGTGTACTTTAACAATCGTGTAAATAATAAATTCA 3996
Query 1246 ------------------ 1245
Sbjct 3997 TAATGACTTCTACCTTTC 4014
