Nucleotide Global Alignment
Description
- Query:
- TRCN0000488105
- Subject:
- XM_024447845.1
- Aligned Length:
- 5118
- Identities:
- 2160
- Gaps:
- 2958
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCTTGGAAGAGAAATTATTTTTCAGGGGGTCGTGGTAGTGTACAAGGGATGTTTGCACCTCGAAGCTCAAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCCATAGCCCCCAGCAAAGGCCTCAGCAATGAGCCAGGGCAAAACAGCTGCTTCCTCAACAGTGCCCTGCAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTTTGTGGCACTTGGATATCTTCCGACGTAGCTTTAGGCAGCTTACAACTCACAAGTGCATGGGAGATTCCTGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATCTTTTGCGCTCTCAAGGGAATCTTTAACCAGTTTCAGTGTAGTAGTGAAAAAGTGCTTCCATCTGACACTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCGCAGTGCTCTGGCAAAGACTTTCCAGGATGAACAACGTTTCCAGCTGGGAATTATGGATGATGCTGCAGAGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCTTTGAAAACCTCCTGATGAGAATTCACTTCCACATTGCTGATGAAACCAAAGAGGATATATGTACTGCCCAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CACTGCATTTCCCATCAGAAATTTGCAATGACATTGTTTGAGCAGTGTGTATGTACTAGCTGTGGTGCCACTTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGATCCGCTGCCTTTCATCCAGATGGTACATTATATCTCCACCACTTCCCTTTGGCTCAGTACTGGCCAGCAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGGGAGGAGGAGTGGGGATTCTATGAGCTTTGGATCTGGGGACAGCAATCAGGCTATTTGTATGCTGGAAAGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CGAGAGAAACCTTCACCAAGCATGTTTGGTGAGCTGCTGCAGAATGCCAGCACCATGGGGGATCTGCGGAACTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCCAAGCAACTGTGGAGAGAGGATCAGGATTCGCCGTGTGTTGATGAATGCTCCACAGATTATCACGATTGGGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGGTATGGGACTCAGACCACTCAGACTTAGCAGAAGATGTTATCCACAGCCTGGGAACCTGCCTTAAGCTGGGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GATCTGTTTTTCAGAGTGACGGATGACCGGGCCAAGCAATCTGAACTGTACTTAGTTGGAATGATCTGTTACTA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGGCAAACATTATTCTACATTCTTTTTTCAAACAAAGATTCGCAAATGGATGTATTTTGATGATGCTCATGTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGGAGATTGGGCCCAAATGGAAGGATGTGGTGACCAAATGCATCAAGGGGCATTATCAGCCCCTGCTGCTGCTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TATGCAGATCCCCAGGGTACCCCAGTTTCCACCCAGGACCTGCCTCCCCAAGCTGAGTTCCAGTCATACAGCAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GACATGCTACGACAGTGAAGATTCAGGGAGGGAGCCCTCCATCTCAAGTGACACTCGAACAGATTCCTCAACGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGAGCTATCCCTACAAACATTCCCACCATGAGTCTGTGGTCAGTCACTTCTCTTCTGATTCTCAGGGGACAGTC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ATCTATAATGTGGAAAATGATTCCATGTCTCAGAGCAGTCGGGACACAGGACACCTGACTGATAGTGAATGTAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCAGAAACACACATCCAAGAAAGGGTCACTGATAGAGCGCAAGAGGAGCTCTGGTCGGGTTAGGAGGAAAGGCG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATGAGCCCCAGGCCTCGGGATACCACAGTGAAGGAGAAACACTGAAAGAGAAGCAGGCTCCTAGAAATGCCTCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AAACCATCCAGCAGCACCAACAGGCTGAGAGATTTTAAAGAGACAGTCAGCAATATGATCCATAACAGACCATC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCTGGCTTCTCAGACCAATGTAGGCTCTCACTGCAGGGGCAGAGGAGGAGACCAGCCTGACAAAAAACCTCCTA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGACCCTGCCTTTACACTCTCGTGACTGGGAAATAGAGAGTACCAGCAGTGAGTCAAAATCCAGTTCTTCCAGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAGTATCGTCCCACATGGAGACCCAAACGAGAATCTCTGAATATTGACAGTATCTTTAGTAAGGACAAAAGGAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GCACTGTGGCTATACCCAGCTTAGCCCCTTTTCTGAGGATTCAGCTAAAGAATTTATACCAGATGAACCAAGCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGCCACCTTCTTACGACATTAAATTTGGTGGACCAAGCCCCCAGTACAAGCGCTGGGGCCCAGCACGGCCAGGC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TCTCACCTTTTAGAGCAGCACCCCCGACTAATCCAGCGAATGGAATCTGGCTATGAAAGCAGTGAGAGGAACAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CAGCAGCCCTGTCAGCCTGGATGCAGCCCTGCCTGAGAGCTCAAATGTCTACAGGGATCCAAGTGCTAAGAGAT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CAGCTGGGTTGGTTCCTTCCTGGCGTCATATCCCAAAGTCGCACAGCAGTAGCATCCTGGAGGTAGACTCCACA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GCATCCATGGGTGGCTGGACAAAGAGTCAGCCTTTCTCTGGTGAGGAGATATCTTCTAAAAGTGAACTGGATGA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ATTGCAGGAAGAGGTGGCCAGGAGGGCGCAGGAACAGGAACTTCGAAGAAAACGGGAGAAGGAGTTAGAGGCAG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CGAAAGGGTTTAACCCTCATCCTAGCCGCTTCATGGACTTGGATGAACTGCAGAATCAGGGGAGGAGTGACGGC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TTTGAGAGGTCCCTGCAAGAGGCAGAGTCAGTGTTTGAAGAGTCACTACATCTGGAACAGAAAGGAGACTGTGC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TGCAGCTTTGGCTCTCTGTAATGAAGCTATCTCTAAACTAAGACTTGCCCTGCATGGTGCCAGCTGTAGCACGC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ACAGCAGAGCCCTAGTCGATAAGAAGTTGCAAATCAGTATTCGAAAAGCACGGAGCCTGCAGGATCGCATGCAG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CAGCAGCAATCACCACAGCAGCCGTCGCAGCCCTCAGCCTGCCTCCCAACACAGGCGGGGACTCTCTCTCAGCC 2738
Query 1 ----------------------------------------------------------------ATGGATACAG 10
||||||||||
Sbjct 2739 AACAAGTGAACAGCCTATCCCGCTCCAAGTATTGTTAAGCCAAGAGGCCCAACTGGAATCCGGCATGGATACAG 2812
Query 11 AGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCTGCCATGAGTCACACTCATCACTATCTCCAGAGTCA 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 AGTTTGGGGCCAGTTCTTTCTTCCATTCACCTGCTTCCTGCCATGAGTCACACTCATCACTATCTCCAGAGTCA 2886
Query 85 TCTGCCCCACAGCACAGCTCCCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 TCTGCCCCACAGCACAGCTCCCCCAGTAGATCTGCCTTGAAGCTTCTGACTTCGGTTGAAGTAGACAACATTGA 2960
Query 159 ACCCTCTGCATTCCACAGGCAAGGTTTACCTAAAGCACCAGGGTGGACTGAGAAGAATTCTCATCATAGTTGGG 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 ACCCTCTGCATTCCACAGGCAAGGTTTACCTAAAGCACCAGGGTGGACTGAGAAGAATTCTCATCATAGTTGGG 3034
Query 233 AGCCATTGGATGCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGACAACAGCAGTTGCAGCAAGCTCCCTCCA 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 AGCCATTGGATGCCCCAGAGGGTAAGCTGCAAGGCTCTAGGTGTGACAACAGCAGTTGCAGCAAGCTCCCTCCA 3108
Query 307 CAAGAAGGAAGAGGCATTGCTCAAGAACAGCTGTTCCAAGAAAAGAAGGATCCTGCTAACCCCTCCCCGGTGAT 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 CAAGAAGGAAGAGGCATTGCTCAAGAACAGCTGTTCCAAGAAAAGAAGGATCCTGCTAACCCCTCCCCGGTGAT 3182
Query 381 GCCTGGAATAGCCACCTCTGAGAGGGGTGATGAACACAGCCTAGGCTGTAGTCCTTCAAATTCATCAGCTCAGC 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 GCCTGGAATAGCCACCTCTGAGAGGGGTGATGAACACAGCCTAGGCTGTAGTCCTTCAAATTCATCAGCTCAGC 3256
Query 455 CCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTTCTTCATTTGTGCTTCACTGTCCTGAT 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 CCAGCCTTCCCCTGTATAGAACCTGCCACCCCATAATGCCTGTTGCTTCTTCATTTGTGCTTCACTGTCCTGAT 3330
Query 529 CCTGTGCAGAAAACTAACCAATGCCTCCAAGGCCAAAGCCTCAAAACTTCATTGACTTTAAAAGTGGACAGAGG 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 CCTGTGCAGAAAACTAACCAATGCCTCCAAGGCCAAAGCCTCAAAACTTCATTGACTTTAAAAGTGGACAGAGG 3404
Query 603 CAGTGAGGAGACCTATAGGCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCAGA 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 CAGTGAGGAGACCTATAGGCCAGAGTTTCCCAGCACAAAGGGGCTTGTCCGTTCTCTGGCTGAGCAGTTCCAGA 3478
Query 677 GGATGCAGGGTGTCTCCATGAGGGATAGTACAGGTTTCAAGGATAGAAGTTTGTCAGGTAGTCTAAGGAAGAAC 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 GGATGCAGGGTGTCTCCATGAGGGATAGTACAGGTTTCAAGGATAGAAGTTTGTCAGGTAGTCTAAGGAAGAAC 3552
Query 751 TCTTCCCCTTCTGATTCTAAGCCTCCTTTCTCACAGGGTCAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACA 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 TCTTCCCCTTCTGATTCTAAGCCTCCTTTCTCACAGGGTCAAGAGAAAGGCCACTGGCCATGGGCAAAGCAACA 3626
Query 825 ATCCTCTCTGGAGGGTGGGGATAGACCACTTTCCTGGGAAGAGTCCACTGAACATTCTTCTCTTGCCTTAAACT 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 ATCCTCTCTGGAGGGTGGGGATAGACCACTTTCCTGGGAAGAGTCCACTGAACATTCTTCTCTTGCCTTAAACT 3700
Query 899 CTGGGCTGCCTAATGGTGAAACTTCTAGCGGAGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAG 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701 CTGGGCTGCCTAATGGTGAAACTTCTAGCGGAGGACAGCCCAGGTTGGCAGAGCCAGACATATACCAAGAGAAG 3774
Query 973 CTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGACTTGGGGACTTCCTTGCCTTTGGA 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3775 CTGTCCCAAGTGAGAGATGTTAGGTCTAAGGATCTGGGCAGCAGTACTGACTTGGGGACTTCCTTGCCTTTGGA 3848
Query 1047 TTCCTGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGAATGAAGTCCT 1120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3849 TTCCTGGGTGAATATCACAAGGTTCTGTGATTCTCAGCTTAAGCATGGGGCACCTAGGCCAGGAATGAAGTCCT 3922
Query 1121 CCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAGAGAAATCACATCCTTTTGCATCCACATTGGAACCAA 1194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3923 CCCCTCATGATTCCCATACGTGTGTAACCTATCCAGAGAGAAATCACATCCTTTTGCATCCACATTGGAACCAA 3996
Query 1195 GACACAGAGCAGGAGACCTCAGAATTGGAGTCTCTGTATCAGGCCAGTCTTCAGGCTTCTCAAGCTGGCTGTTC 1268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3997 GACACAGAGCAGGAGACCTCAGAATTGGAGTCTCTGTATCAGGCCAGTCTTCAGGCTTCTCAAGCTGGCTGTTC 4070
Query 1269 TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGATGGCATGGGGAGGAGGT 1342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4071 TGGATGGGGGCAGCAGGATACCGCCTGGCACCCACTTAGCCAAACAGGCTCTGCAGATGGCATGGGGAGGAGGT 4144
Query 1343 TGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAATGGAGCATGGTCTCCATGAAGCCAGA 1416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4145 TGCACTCAGCCCATGATCCTGGTCTCTCAAAGACTTCAACAGCAGAAATGGAGCATGGTCTCCATGAAGCCAGA 4218
Query 1417 ACA----------------------------------------------------------------------- 1419
|||
Sbjct 4219 ACAGTGCGTACTTCTCAGGCTACACCTTGCCGAGGCCTCAGCAGGGAGTGTGGGGAGGATGAGCAGTACAGTGC 4292
Query 1420 -------------------------------------------------------------------------- 1419
Sbjct 4293 AGAGAATTTACGTCGCATCTCACGCAGTCTCAGTGGCACCGTTGTCTCAGAGAGGGAGGAAGCTCCGGTTTCTT 4366
Query 1420 -----------GATTCATCAAACGTGAGGAAGCCTTTGGAAACCGGGCACCGTTGTTCCAGCTCCTCTTCCCTC 1482
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4367 CCCACAGTTTTGATTCATCAAACGTGAGGAAGCCTTTGGAAACCGGGCACCGTTGTTCCAGCTCCTCTTCCCTC 4440
Query 1483 CCTGTCATCCATGACCCTTCTGTGTTTCTCCTCGGTCCCCAACTCTACCTTCCCCAACCACAGTTCCTGTCCCC 1556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4441 CCTGTCATCCATGACCCTTCTGTGTTTCTCCTCGGTCCCCAACTCTACCTTCCCCAACCACAGTTCCTGTCCCC 4514
Query 1557 AGATGTCCTGATGCCCACCATGGCAGGGGAGCCCAATAGACTCCCAGGAACTTCAAGGAGTGTCCAGCAGTTTC 1630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4515 AGATGTCCTGATGCCCACCATGGCAGGGGAGCCCAATAGACTCCCAGGAACTTCAAGGAGTGTCCAGCAGTTTC 4588
Query 1631 TGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGGAAGGACTTTGAACTACCAGAGCCTC 1704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4589 TGGCTATGTGTGACAGGGGTGAAACTTCCCAAGGGGCCAAGTACACAGGAAGGACTTTGAACTACCAGAGCCTC 4662
Query 1705 CCCCATCGCTCCAGAACAGACAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT 1778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4663 CCCCATCGCTCCAGAACAGACAACTCCTGGGCACCCTGGTCAGAGACCAACCAGCATATTGGGACCAGATTCCT 4736
Query 1779 GACTACTCCAGGGTGCAATCCTCAACTAACCTACACTGCCACACTACCAGAAAGAAGCAAGGGCCTTCAGGTTC 1852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4737 GACTACTCCAGGGTGCAATCCTCAACTAACCTACACTGCCACACTACCAGAAAGAAGCAAGGGCCTTCAGGTTC 4810
Query 1853 CTCACACTCAGTCCTGGAGTGATCTTTTCCATTCACCCTCCCACCCTCCCATTGTTCATCCTGTGTACCCACCA 1926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4811 CTCACACTCAGTCCTGGAGTGATCTTTTCCATTCACCCTCCCACCCTCCCATTGTTCATCCTGTGTACCCACCA 4884
Query 1927 TCTAGCAGTCTTCATGTACCCCTGAGGTCAGCTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCC 2000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4885 TCTAGCAGTCTTCATGTACCCCTGAGGTCAGCTTGGAATTCAGATCCTGTTCCAGGGTCCCGAACCCCTGGTCC 4958
Query 2001 TCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAAGCAGTTATGCCTCCCACTCTGGACACAGGAGAA 2074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4959 TCGAAGAGTAGATATGCCCCCAGATGATGACTGGAGGCAAAGCAGTTATGCCTCCCACTCTGGACACAGGAGAA 5032
Query 2075 CAGTGGGAGAGGGGTTTCTGTTTGTTCTATCAGATGCTCCCAGAAGAGAGCAGATCAGGGCTAGAGTCCTGCAG 2148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5033 CAGTGGGAGAGGGGTTTCTGTTTGTTCTATCAGATGCTCCCAGAAGAGAGCAGATCAGGGCTAGAGTCCTGCAG 5106
Query 2149 CACAGTCAATGG 2160
||||||||||||
Sbjct 5107 CACAGTCAATGG 5118
