Nucleotide Global Alignment
Description
- Query:
- TRCN0000488117
- Subject:
- NM_001039652.2
- Aligned Length:
- 1519
- Identities:
- 1031
- Gaps:
- 337
Alignment
Query 1 ATGTCAGATGCTCAGCTCGGTCCCCTCCGCCTGACGCTCCTCTCTGTCTCAGCCAGGACTGGTTTCTGTAAGAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 ACAGCAGGAGCTGTGGCAGCGGCGAAAGGAAGCGGCTGAGGCGCTTGGAACCCGAAAAGTCTCGGTGCTCCTGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CTACCTCGCACAGCGGTGCCCGCCCGGCCGTCAGTACCATGGACAGCAGCGCTGCCCCCACGAACGCCAGCAAT 222
||||||||||||||.|.|||...||||..||||.|.
Sbjct 1 --------------------------------------ATGGACAGCAGCGCCGGCCCAGGGAACATCAGCGAC 36
Query 223 TGCACTGATGCCTTGGCGTACT-CAAGTTGCTCCCCAGCACCCAGCCCCGGTTCCTGGGTCAACTTGTCCCACT 295
|||.||||..||||.|| |.|| ||||||||||||||||| ||.||.||||||.||||||||||||||.
Sbjct 37 TGCTCTGACCCCTTAGC-TCCTGCAAGTTGCTCCCCAGCA------CCTGGCTCCTGGCTCAACTTGTCCCACG 103
Query 296 TAGATGGCAACCTGTCCGACCCATGTGGTCCGAACCGCACCGACCTGGGCGGGAGAGACAGCCTGTGCCCTCCG 369
|.||||||||||.||||||||||||.|||||.||||||||.|..||.||||||||..|||||||||||||||.|
Sbjct 104 TTGATGGCAACCAGTCCGACCCATGCGGTCCTAACCGCACGGGGCTTGGCGGGAGCCACAGCCTGTGCCCTCAG 177
Query 370 ACCGGCAGTCCCTCCATGATCACGGCCATCACGATCATGGCCCTCTACTCCATCGTGTGCGTGGTGGGGCTCTT 443
||||||||.||.||||||.||||.||||||||.||||||||||||||.||.||||||||.||.|||||.|||||
Sbjct 178 ACCGGCAGCCCTTCCATGGTCACAGCCATCACCATCATGGCCCTCTATTCTATCGTGTGTGTAGTGGGCCTCTT 251
Query 444 CGGAAACTTCCTGGTCATGTATGTGATTGTCAGATACACCAAGATGAAGACTGCCACCAACATCTACATTTTCA 517
.|||||||||||||||||||||||||||||.|||||.|||||.|||||||||||||||||||||||||||||||
Sbjct 252 TGGAAACTTCCTGGTCATGTATGTGATTGTAAGATATACCAAAATGAAGACTGCCACCAACATCTACATTTTCA 325
Query 518 ACCTTGCTCTGGCAGATGCCTTAGCCACCAGTACCCTGCCCTTCCAGAGTGTGAATTACCTAATGGGAACATGG 591
||||||||||||||||||||||||||||.||.||.||||||||.||||||||.||.|||||.||||||||.|||
Sbjct 326 ACCTTGCTCTGGCAGATGCCTTAGCCACTAGCACGCTGCCCTTTCAGAGTGTTAACTACCTGATGGGAACGTGG 399
Query 592 CCATTTGGAACCATCCTTTGCAAGATAGTGATCTCCATAGATTACTATAACATGTTCACCAGCATATTCACCCT 665
||.|||||||.||||||.||||||||.||||||||.|||||.|||||.||||||||||||||.||.||||||||
Sbjct 400 CCCTTTGGAAACATCCTCTGCAAGATCGTGATCTCAATAGACTACTACAACATGTTCACCAGTATCTTCACCCT 473
Query 666 CTGCACCATGAGTGTTGATCGATACATTGCAGTCTGCCACCCTGTCAAGGCCTTAGATTTCCGTACTCCCCGAA 739
|||||||||||||||.||.||.||||||||.|||||||||||.|||||||||.|.|||||||||||.|||||||
Sbjct 474 CTGCACCATGAGTGTAGACCGCTACATTGCCGTCTGCCACCCGGTCAAGGCCCTGGATTTCCGTACCCCCCGAA 547
Query 740 ATGCCAAAATTATCAATGTCTGCAACTGGATCCTCTCTTCAGCCATTGGTCTTCCTGTAATGTTCATGGCTACA 813
|||||||||||.||||||||||||||||||||||||||||.|||||||||||.||.||||||||||||||.||.
Sbjct 548 ATGCCAAAATTGTCAATGTCTGCAACTGGATCCTCTCTTCTGCCATTGGTCTGCCCGTAATGTTCATGGCAACC 621
Query 814 ACAAAATACAGGCAAGGTTCCATAGATTGTACACTAACATTCTCTCATCCAACCTGGTACTGGGAAAACCTGCT 887
||||||||||||||.||.|||||||||||.||.||.||.|||||||||||.||.|||||||||||.||||||||
Sbjct 622 ACAAAATACAGGCAGGGGTCCATAGATTGCACCCTCACGTTCTCTCATCCCACATGGTACTGGGAGAACCTGCT 695
Query 888 GAAGATCTGTGTTTTCATCTTCGCCTTCATTATGCCAGTGCTCATCATTACCGTGTGCTATGGACTGATGATCT 961
.||.||||||||.|||||||||||||||||.|||||.||.||||||||.||.|||||.||||||||||||||||
Sbjct 696 CAAAATCTGTGTCTTCATCTTCGCCTTCATCATGCCGGTCCTCATCATCACTGTGTGTTATGGACTGATGATCT 769
Query 962 TGCGCCTCAAGAGTGTCCGCATGCTCTCTGGCTCCAAAGAAAAGGACAGGAATCTTCGAAGGATCACCAGGATG 1035
|.||.||||||||||||||||||||.||.|||||||||||||||||||||||.||.||.|||||||||.|||||
Sbjct 770 TACGACTCAAGAGTGTCCGCATGCTGTCGGGCTCCAAAGAAAAGGACAGGAACCTGCGCAGGATCACCCGGATG 843
Query 1036 GTGCTGGTGGTGGTGGCTGTGTTCATCGTCTGCTGGACTCCCATTCACATTTACGTCATCATTAAAGCCTTGGT 1109
|||||||||||.||||||||.||.||.|||||||||||.|||||.|||||.||.||||||||.|||||..||.|
Sbjct 844 GTGCTGGTGGTCGTGGCTGTATTTATTGTCTGCTGGACCCCCATCCACATCTATGTCATCATCAAAGCACTGAT 917
Query 1110 TACAATCCCAGAAACTACGTTCCAGACTGTTTCTTGGCACTTCTGCATTGCTCTAGGTTACACAAACAGCTGCC 1183
.||.||.||||||||.||.||||||||||||||.|||||||||||||||||..|.|||||||||||||||||||
Sbjct 918 CACGATTCCAGAAACCACTTTCCAGACTGTTTCCTGGCACTTCTGCATTGCCTTGGGTTACACAAACAGCTGCC 991
Query 1184 TCAACCCAGTCCTTTATGCATTTCTGGATGAAAACTTCAAACGATGCTTCAGAGAGTTCTGTATCCCAACCTCT 1257
|.||||||||.||||||||.||.|||||||||||||||||||||||.||.|||||||||||.||||||||.||.
Sbjct 992 TGAACCCAGTTCTTTATGCGTTCCTGGATGAAAACTTCAAACGATGTTTTAGAGAGTTCTGCATCCCAACTTCC 1065
Query 1258 TCCAACATTGAGCAACAAAACTCCACTCGAATTCGTCAGAACACTAGAGACCACCCCTCCACGGCCAATACAGT 1331
||||..||.||.||.||||||||..|||||||.|||||.||||||||.||.||||||||||||||.||||||||
Sbjct 1066 TCCACAATCGAACAGCAAAACTCTGCTCGAATCCGTCAAAACACTAGGGAACACCCCTCCACGGCTAATACAGT 1139
Query 1332 GGATAGAACTAATCATCAGCTAGAAAATCTGGAAG-CAGAAACTGCTCCGTTGCCCG----------------- 1387
||||.|||||||.||.|||| .||..||||.|| ||| |||.||||.
Sbjct 1140 GGATCGAACTAACCACCAGC---CAACCCTGGCAGTCAG---------CGTGGCCCAGATCTTTACAGGATATC 1201
Query 1388 -------------------------------------------------------------------------- 1387
Sbjct 1202 CTTCTCCGACTCATGTTGAAAAACCCTGCAAGAGTTGCATGGACAGAGGAATGAGGAACCTTCTTCCTGATGAT 1275
Query 1388 --------------------------------------- 1387
Sbjct 1276 GGCCCAAGACAGGAATCCGGGGAAGGCCAGCTTGGCAGG 1314