Nucleotide Global Alignment
Description
- Query:
- TRCN0000488117
- Subject:
- NM_001302795.1
- Aligned Length:
- 1529
- Identities:
- 848
- Gaps:
- 561
Alignment
Query 1 ATGTCAGATGCTCAGCTCGGTCCCCTCCGCCTGACGCTCCTCTCTGTCTCAGCCAGGACTGGTTTCTGTAAGAA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 ACAGCAGGAGCTGTGGCAGCGGCGAAAGGAAGCGGCTGAGGCGCTTGGAACCCGAAAAGTCTCGGTGCTCCTGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CTACCTCGCACAGCGGTGCCCGCCCGGCCGTCAGTACCATGGACAGCAGCGCTGCCCCCACGAACGCCAGCAAT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TGCACTGATGCCTTGGCGTACTCAAGTTGCTCCCCAGCACCCAGCCCCGGTTCCTGGGTCAACTTGTCCCACTT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 A-GATGGCAACCT--------GTCCGACCCATGTGGTCCGAACCGCACCGACCTGGGCGGGAGAGACAGCCTGT 361
| ||||| ||.|| |||.| ||| ||| ||..||.|.||| |||||
Sbjct 1 ATGATGG-AAGCTTTCTCTAAGTCTG---CAT----TCC-AAAAGCTCAGAC---------AGAGA-------- 48
Query 362 GCCCTCCGACCGGCAGTCCCTCCATGATCACGGCCATCACGATCATGGCCCTCTACTCCATCGTGTGCGTGGTG 435
||| ||..||||.|| ||
Sbjct 49 -------------------------GAT---GGAAATCAAGA----GG-------------------------- 64
Query 436 GGGCTCTTCGGAA-ACTT-CCTGGTCATGTATGTGATTGTCAGATACACCAAGATGAAGACTGCCACCAACATC 507
|||| |.|| || |||||||.|||||.|||||||||||||||||||||
Sbjct 65 ---------GGAAGAGTTACC------------------TCAGATATACCAAAATGAAGACTGCCACCAACATC 111
Query 508 TACATTTTCAACCTTGCTCTGGCAGATGCCTTAGCCACCAGTACCCTGCCCTTCCAGAGTGTGAATTACCTAAT 581
||||||||||||||||||||||||||||||||||||||.||.||.||||||||.||||||||.||.|||||.||
Sbjct 112 TACATTTTCAACCTTGCTCTGGCAGATGCCTTAGCCACTAGCACGCTGCCCTTTCAGAGTGTTAACTACCTGAT 185
Query 582 GGGAACATGGCCATTTGGAACCATCCTTTGCAAGATAGTGATCTCCATAGATTACTATAACATGTTCACCAGCA 655
||||||.|||||.|||||||.||||||.||||||||.||||||||.|||||.|||||.||||||||||||||.|
Sbjct 186 GGGAACGTGGCCCTTTGGAAACATCCTCTGCAAGATCGTGATCTCAATAGACTACTACAACATGTTCACCAGTA 259
Query 656 TATTCACCCTCTGCACCATGAGTGTTGATCGATACATTGCAGTCTGCCACCCTGTCAAGGCCTTAGATTTCCGT 729
|.|||||||||||||||||||||||.||.||.||||||||.|||||||||||.|||||||||.|.|||||||||
Sbjct 260 TCTTCACCCTCTGCACCATGAGTGTAGACCGCTACATTGCCGTCTGCCACCCGGTCAAGGCCCTGGATTTCCGT 333
Query 730 ACTCCCCGAAATGCCAAAATTATCAATGTCTGCAACTGGATCCTCTCTTCAGCCATTGGTCTTCCTGTAATGTT 803
||.||||||||||||||||||.||||||||||||||||||||||||||||.|||||||||||.||.||||||||
Sbjct 334 ACCCCCCGAAATGCCAAAATTGTCAATGTCTGCAACTGGATCCTCTCTTCTGCCATTGGTCTGCCCGTAATGTT 407
Query 804 CATGGCTACAACAAAATACAGGCAAGGTTCCATAGATTGTACACTAACATTCTCTCATCCAACCTGGTACTGGG 877
||||||.||.||||||||||||||.||.|||||||||||.||.||.||.|||||||||||.||.||||||||||
Sbjct 408 CATGGCAACCACAAAATACAGGCAGGGGTCCATAGATTGCACCCTCACGTTCTCTCATCCCACATGGTACTGGG 481
Query 878 AAAACCTGCTGAAGATCTGTGTTTTCATCTTCGCCTTCATTATGCCAGTGCTCATCATTACCGTGTGCTATGGA 951
|.||||||||.||.||||||||.|||||||||||||||||.|||||.||.||||||||.||.|||||.||||||
Sbjct 482 AGAACCTGCTCAAAATCTGTGTCTTCATCTTCGCCTTCATCATGCCGGTCCTCATCATCACTGTGTGTTATGGA 555
Query 952 CTGATGATCTTGCGCCTCAAGAGTGTCCGCATGCTCTCTGGCTCCAAAGAAAAGGACAGGAATCTTCGAAGGAT 1025
|||||||||||.||.||||||||||||||||||||.||.|||||||||||||||||||||||.||.||.|||||
Sbjct 556 CTGATGATCTTACGACTCAAGAGTGTCCGCATGCTGTCGGGCTCCAAAGAAAAGGACAGGAACCTGCGCAGGAT 629
Query 1026 CACCAGGATGGTGCTGGTGGTGGTGGCTGTGTTCATCGTCTGCTGGACTCCCATTCACATTTACGTCATCATTA 1099
||||.||||||||||||||||.||||||||.||.||.|||||||||||.|||||.|||||.||.||||||||.|
Sbjct 630 CACCCGGATGGTGCTGGTGGTCGTGGCTGTATTTATTGTCTGCTGGACCCCCATCCACATCTATGTCATCATCA 703
Query 1100 AAGCCTTGGTTACAATCCCAGAAACTACGTTCCAGACTGTTTCTTGGCACTTCTGCATTGCTCTAGGTTACACA 1173
||||..||.|.||.||.||||||||.||.||||||||||||||.|||||||||||||||||..|.|||||||||
Sbjct 704 AAGCACTGATCACGATTCCAGAAACCACTTTCCAGACTGTTTCCTGGCACTTCTGCATTGCCTTGGGTTACACA 777
Query 1174 AACAGCTGCCTCAACCCAGTCCTTTATGCATTTCTGGATGAAAACTTCAAACGATGCTTCAGAGAGTTCTGTAT 1247
|||||||||||.||||||||.||||||||.||.|||||||||||||||||||||||.||.|||||||||||.||
Sbjct 778 AACAGCTGCCTGAACCCAGTTCTTTATGCGTTCCTGGATGAAAACTTCAAACGATGTTTTAGAGAGTTCTGCAT 851
Query 1248 CCCAACCTCTTCCAACATTGAGCAACAAAACTCCACTCGAATTCGTCAGAACACTAGAGACCACCCCTCCACGG 1321
||||||.||.||||..||.||.||.||||||||..|||||||.|||||.||||||||.||.|||||||||||||
Sbjct 852 CCCAACTTCCTCCACAATCGAACAGCAAAACTCTGCTCGAATCCGTCAAAACACTAGGGAACACCCCTCCACGG 925
Query 1322 CCAATACAGTGGATAGAACTAATCATCAGCTAGAAAATCTGGAAG-CAGAAACTGCTCCGTTGCCCG------- 1387
|.||||||||||||.|||||||.||.|||| .||..||||.|| ||| |||.||||.
Sbjct 926 CTAATACAGTGGATCGAACTAACCACCAGC---CAACCCTGGCAGTCAG---------CGTGGCCCAGATCTTT 987
Query 1388 -------------------------------------------------------------------------- 1387
Sbjct 988 ACAGGATATCCTTCTCCGACTCATGTTGAAAAACCCTGCAAGAGTTGCATGGACAGAGGAATGAGGAACCTTCT 1061
Query 1388 ------------------------------------------------- 1387
Sbjct 1062 TCCTGATGATGGCCCAAGACAGGAATCCGGGGAAGGCCAGCTTGGCAGG 1110
