Nucleotide Global Alignment

Description

Query:
TRCN0000488117
Subject:
NM_001302796.1
Aligned Length:
1399
Identities:
846
Gaps:
436

Alignment

Query    1  ATGTCAGATGCTCAGCTCGGTCCCCTCCGCCTGACGCTCCTCTCTGTCTCAGCCAGGACTGGTTTCTGTAAGAA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  ACAGCAGGAGCTGTGGCAGCGGCGAAAGGAAGCGGCTGAGGCGCTTGGAACCCGAAAAGTCTCGGTGCTCCTGG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  CTACCTCGCACAGCGGTGCCCGCCCGGCCGTCAGTACCATGGACAGCAGCGCTGCCCCCACGAACGCCAGCAAT  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TGCACTGATGCCTTGGCGTACTCAAGTTGCTCCCCAGCACCCAGCCCCGGTTCCTGGGTCAACTTGTCCCACTT  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  A-GATGGCAACCT--------GTCCGACCCATGTGGTCCGAACCGCACCGACCTGGGCGGGAGAGACAGCCTGT  361
            | ||||| ||.||        |||.|   |||    ||| ||..||.|.|||         |||||        
Sbjct    1  ATGATGG-AAGCTTTCTCTAAGTCTG---CAT----TCC-AAAAGCTCAGAC---------AGAGA--------  48

Query  362  GCCCTCCGACCGGCAGTCCCTCCATGATCACGGCCATCACGATCATGGCCCTCTACTCCATCGTGTGCGTGGTG  435
                                     |||   ||..||||.||    ||                          
Sbjct   49  -------------------------GAT---GGAAATCAAGA----GG--------------------------  64

Query  436  GGGCTCTTCGGAA-ACTT-CCTGGTCATGTATGTGATTGTCAGATACACCAAGATGAAGACTGCCACCAACATC  507
                     |||| |.|| ||                  |||||||.|||||.|||||||||||||||||||||
Sbjct   65  ---------GGAAGAGTTACC------------------TCAGATATACCAAAATGAAGACTGCCACCAACATC  111

Query  508  TACATTTTCAACCTTGCTCTGGCAGATGCCTTAGCCACCAGTACCCTGCCCTTCCAGAGTGTGAATTACCTAAT  581
            ||||||||||||||||||||||||||||||||||||||.||.||.||||||||.||||||||.||.|||||.||
Sbjct  112  TACATTTTCAACCTTGCTCTGGCAGATGCCTTAGCCACTAGCACGCTGCCCTTTCAGAGTGTTAACTACCTGAT  185

Query  582  GGGAACATGGCCATTTGGAACCATCCTTTGCAAGATAGTGATCTCCATAGATTACTATAACATGTTCACCAGCA  655
            ||||||.|||||.|||||||.||||||.||||||||.||||||||.|||||.|||||.||||||||||||||.|
Sbjct  186  GGGAACGTGGCCCTTTGGAAACATCCTCTGCAAGATCGTGATCTCAATAGACTACTACAACATGTTCACCAGTA  259

Query  656  TATTCACCCTCTGCACCATGAGTGTTGATCGATACATTGCAGTCTGCCACCCTGTCAAGGCCTTAGATTTCCGT  729
            |.|||||||||||||||||||||||.||.||.||||||||.|||||||||||.|||||||||.|.|||||||||
Sbjct  260  TCTTCACCCTCTGCACCATGAGTGTAGACCGCTACATTGCCGTCTGCCACCCGGTCAAGGCCCTGGATTTCCGT  333

Query  730  ACTCCCCGAAATGCCAAAATTATCAATGTCTGCAACTGGATCCTCTCTTCAGCCATTGGTCTTCCTGTAATGTT  803
            ||.||||||||||||||||||.||||||||||||||||||||||||||||.|||||||||||.||.||||||||
Sbjct  334  ACCCCCCGAAATGCCAAAATTGTCAATGTCTGCAACTGGATCCTCTCTTCTGCCATTGGTCTGCCCGTAATGTT  407

Query  804  CATGGCTACAACAAAATACAGGCAAGGTTCCATAGATTGTACACTAACATTCTCTCATCCAACCTGGTACTGGG  877
            ||||||.||.||||||||||||||.||.|||||||||||.||.||.||.|||||||||||.||.||||||||||
Sbjct  408  CATGGCAACCACAAAATACAGGCAGGGGTCCATAGATTGCACCCTCACGTTCTCTCATCCCACATGGTACTGGG  481

Query  878  AAAACCTGCTGAAGATCTGTGTTTTCATCTTCGCCTTCATTATGCCAGTGCTCATCATTACCGTGTGCTATGGA  951
            |.||||||||.||.||||||||.|||||||||||||||||.|||||.||.||||||||.||.|||||.||||||
Sbjct  482  AGAACCTGCTCAAAATCTGTGTCTTCATCTTCGCCTTCATCATGCCGGTCCTCATCATCACTGTGTGTTATGGA  555

Query  952  CTGATGATCTTGCGCCTCAAGAGTGTCCGCATGCTCTCTGGCTCCAAAGAAAAGGACAGGAATCTTCGAAGGAT  1025
            |||||||||||.||.||||||||||||||||||||.||.|||||||||||||||||||||||.||.||.|||||
Sbjct  556  CTGATGATCTTACGACTCAAGAGTGTCCGCATGCTGTCGGGCTCCAAAGAAAAGGACAGGAACCTGCGCAGGAT  629

Query 1026  CACCAGGATGGTGCTGGTGGTGGTGGCTGTGTTCATCGTCTGCTGGACTCCCATTCACATTTACGTCATCATTA  1099
            ||||.||||||||||||||||.||||||||.||.||.|||||||||||.|||||.|||||.||.||||||||.|
Sbjct  630  CACCCGGATGGTGCTGGTGGTCGTGGCTGTATTTATTGTCTGCTGGACCCCCATCCACATCTATGTCATCATCA  703

Query 1100  AAGCCTTGGTTACAATCCCAGAAACTACGTTCCAGACTGTTTCTTGGCACTTCTGCATTGCTCTAGGTTACACA  1173
            ||||..||.|.||.||.||||||||.||.||||||||||||||.|||||||||||||||||..|.|||||||||
Sbjct  704  AAGCACTGATCACGATTCCAGAAACCACTTTCCAGACTGTTTCCTGGCACTTCTGCATTGCCTTGGGTTACACA  777

Query 1174  AACAGCTGCCTCAACCCAGTCCTTTATGCATTTCTGGATGAAAACTTCAAACGATGCTTCAGAGAGTTCTGTAT  1247
            |||||||||||.||||||||.||||||||.||.|||||||||||||||||||||||.||.|||||||||||.||
Sbjct  778  AACAGCTGCCTGAACCCAGTTCTTTATGCGTTCCTGGATGAAAACTTCAAACGATGTTTTAGAGAGTTCTGCAT  851

Query 1248  CCCAACCTCTTCCAACATTGAGCAACAAAACTCCACTCGAATTCGTCAGAACACTAGAGACCACCCCTCCACGG  1321
            ||||||.||.||||..||.||.||.||||||||..|||||||.|||||.||||||||.||.|||||||||||||
Sbjct  852  CCCAACTTCCTCCACAATCGAACAGCAAAACTCTGCTCGAATCCGTCAAAACACTAGGGAACACCCCTCCACGG  925

Query 1322  CCAATACAGTGGATAGAACTAATCATCAGCTAGAAAATCTGGAAGCAGAAACTGC-TCCGTTGCCCG  1387
            |.||||||||||||.|||||||.||.|||  ||.||   ||  ||  |||.||.| |||        
Sbjct  926  CTAATACAGTGGATCGAACTAACCACCAG--AGGAA---TG--AG--GAACCTTCTTCC--------  975

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