Nucleotide Global Alignment
Description
- Query:
- TRCN0000488190
- Subject:
- XM_006509933.3
- Aligned Length:
- 4092
- Identities:
- 1686
- Gaps:
- 2170
Alignment
Query 1 ATGGACGCTCTCAATAGGAACCAAATAGGCCCTGGATGCCAGACCCAGACCATGGTGCAGAAAGGACCCTTGGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CCTGATCGAGACAGGCAAAGGGCTGAAAGTGCAAACGGACAAACCCCACCTGGTGAGCCTGGGCAGTGGGCGAC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TCAGCACAGCCATCACCCTCCTGCCGCTGGAGGAAGGGAGGACGGTGATTGGCTCTGCAGCCAGAGACATCTCA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CTACAGGGCCCAGGCCTGGCTCCAGAGCACTGCTACATCGAGAACCTGCGGGGCACCCTCACCCTCTACCCCTG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TGGCAATGCCTGCACTATTGATGGGCTCCCTGTCCGGCAGCCTACCCGGCTCACTCAGGGCTGCATGTTGTGCC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TGGGTCAGTCCACCTTCCTTCGCTTTAACCACCCGGCTGAAGCCAAGTGGATGAAAAGCATGATTCCAGCAGGG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GGCCGAGCCCCTGGGCCCCCCTACAGCCCTGTTCCTGCAGAATCAGAAAGTCTGGTAAATGGGAACCACACCCC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 ACAGACTGCAACACGGGGACCCTCTGCCTGTGCCAGCCACAGTTCCCTGGTGAGCTCTATTGAGAAGGACCTGC 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 AAGAGATCATGGACTCACTGGTGCTAGAGGAGCCTGGAGCTGCTGGCAAGAAGCCTGCCGCAACCTCTCCACTG 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 TCACCGATGGCTAATGGTGGGCGCTACCTGCTGTCTCCCCCAACCAGCCCCGGCGCCATGTCTGTGGGCTCCAG 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 CTATGAGAACACCTCTCCAGCCTTCTCTCCACTCTCTTCACCAGCCAGCAGTGGAAGCTGTGCCAGTCACTCAC 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 CCAGTGGGCAAGAGCCAGGACCTTCTGTGCCCCCGCTGGTACCTGCCCGTTCCTCCAGCTACCATCTGGCCCTA 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 CAGCCCCCACAGTCCCGCCCAAGTGGTGCTCGCTCCGAGAGTCCTCGGCTGAGCAGGAAAGGGGGCCATGAGAG 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 GCCTCCCAGCCCTGGCCTCCGGGGTCTGCTGACAGACAGCCCTGCAGCTACTGTCTTGGCGGAGGCCCGGAGAG 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 CCACTGAGAGCCCCCGGCTGGGTGGGCAGCTGCCTGTGGTGGCCATCAGCCTGAGTGAATACCCAGCTTCTGGT 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 GCTCTCAGTCAACCCACCAGCATTCCTGGCAGCCCCAAGTTTCAGCCTCCAGTCCCTGCTCCCCGAAACAAGAT 1184
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1185 TGGCACACTCCAGGACCGCCCTCCCAGCCCTTTCCGTGAGCCTCCAGGCAGTGAGCGGGTGCTAACAACCAGCC 1258
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1259 CCTCACGCCAACTGGTGGGCCGAACATTTTCAGATGGGTTAGCCACCCGTACCCTGCAGCCTCCTGAGAGTCCC 1332
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1333 CGCCTGGGCCGGCGGGGCCTGGACAGTATGCGAGAACTACCCCCCTTAAGTCCATCTCTGTCCCGGCGAGCTCT 1406
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1407 CTCCCCGCTGCCCACCCGGACCACCCCAGATCCCAAGCTAAACAGGGAAGTGGCAGAGAGTCCTCGGCCCCGGC 1480
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1481 GCTGGGCAGCCCATGGGGCTTCACCAGAGGACTTCTCCCTGACGCTGGGGGCACGGGGCCGTAGGACACGGAGC 1554
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1555 CCCTCACCCACACTGGGTGAGTCTCTGGCACCCCACAAGGGCAGCTTCAGTGGCAGGCTGAGCCCAGCCTACAG 1628
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1629 TCTGGGCTCTCTTACTGGGGCTTCACCCTGCCAGAGTCCCTGTGTCCAGAGGAAGCTCTCCAGCGGGGACTTGC 1702
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1703 GGGTGCCTGTCACAAGGGAGCGGAAAAATAGCATCACAGAGATCAGTGACAATGAGGACGACCTCCTGGAGTAC 1776
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1777 CACCGGCGACAGCGCCAAGAGCGGCTCCGGGAGCAGGAGATGGAGAGGCTGGAACGCCAGCGCCTGGAGACCAT 1850
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1851 CCTGAACCTGTGTGCCGAATACAGCCGGGCTGATGGGGGACCTGAGGCTGGGGAGCTTCCCAGCATTGGGGAGG 1924
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1925 CCACCGCAGCATTGGCACTGGCAGGCCGGAGGCCCTCACGAGGCCTTGCAGGGGCCTCTGGGCGGAGCAGCGAG 1998
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1999 GAGCCTGGCGTTGCCACCCAACGCCTATGGGAGAGTATGGAGCGCTCAGATGAGGAAAATCTCAAGGAGGAGTG 2072
|||||||||||.|||||.||.||||||||.|||||.||
Sbjct 1 ------------------------------------ATGGAGCGCTCTGATGAAGAGAATCTCAAAGAGGAATG 38
Query 2073 CAGCAGCACTGAGAGCACCCAGCAGGAGCACGAAGATGCACCTAGCACCAAGCTCCAGGGAGAGGTGCTAGCCC 2146
|||||||||.||||||||||||||||||||.|||||.||.|||.||.|.||||.|||.||.||||||||.||..
Sbjct 39 CAGCAGCACCGAGAGCACCCAGCAGGAGCATGAAGACGCTCCTGGCGCGAAGCACCAAGGCGAGGTGCTGGCTG 112
Query 2147 TGGAAGAAGAGCGGGCTCAGGTGCTGGGGCACGTGGAGCAGCTCAAGGTCCGTGTGAAGGAGCTAGAGCAGCAG 2220
|||||||.||||||||||||||.|||||||..||.||.|||||.|||.||||.|||||||||||.||.||||||
Sbjct 113 TGGAAGAGGAGCGGGCTCAGGTTCTGGGGCGAGTAGAACAGCTGAAGATCCGAGTGAAGGAGCTGGAACAGCAG 186
Query 2221 CTGCAGGAGTCAGCCCGAGAGGCCGAAATGGAGCGGGCACTGCTGCAGGGAGAGAGGGAGGCAGAGCGGGCACT 2294
|||||||||.||||||||||||||||.||||||.|.||||||||||||||.|||.|||||||||||||.|| ||
Sbjct 187 CTGCAGGAGGCAGCCCGAGAGGCCGAGATGGAGAGAGCACTGCTGCAGGGGGAGCGGGAGGCAGAGCGAGC-CT 259
Query 2295 -GCTGCAGAAGGAGCAGAAGGCAGTGGATCAGCTGCAGGAGAAGCTGGTGGCCTTGGAGACAGGCATCCAGAAG 2367
||||||||||||.||.|.|||.|||||.|||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 260 CGCTGCAGAAGGAACAAAGGGCGGTGGACCAGCTGCAGGAGAAGTTGGTGGCCTTGGAGACAGGCATCCAGAAG 333
Query 2368 GAGAGGGACAA--------------------------------------------------------------- 2378
||.||||||||
Sbjct 334 GACAGGGACAAGGAGAGGGCGGAGCTGGCCGCGGGACGGAGGCACCTGGAGGCCCGCCAGGCGCTCTACGCCGA 407
Query 2379 ------------------------------------------------------------------GGAGGCAG 2386
||||||||
Sbjct 408 GCTCCAGACGCAGCTCGATAACTGCCCCGAGTCAGTGCGGGAACAGTTACAGGAGCAGCTGAGAAGGGAGGCAG 481
Query 2387 AGGCCCTGGAGACTGAGACAAAGCTCTTTGAGGACTTGGAGTTCCAGCAGTTGGAGCGGGAGAGCCGCGTGGAG 2460
|.||.||.|||||||||||||||||||||||||||.||||||||||||||.|||||||.|||||.|||||||||
Sbjct 482 ACGCTCTAGAGACTGAGACAAAGCTCTTTGAGGACCTGGAGTTCCAGCAGCTGGAGCGTGAGAGTCGCGTGGAG 555
Query 2461 GAGGAGCGCGAGCTGGCCGGCCAGGGGCTGCTCCGGAGCAAGGCTGAGCTGCTCCGCAGCATCGCCAAGAGGAA 2534
||||||||.||||||||||||||.||||||||.|||||||||||||||.||||.|||||..|...|||||||||
Sbjct 556 GAGGAGCGGGAGCTGGCCGGCCAAGGGCTGCTGCGGAGCAAGGCTGAGTTGCTGCGCAGTGTGAGCAAGAGGAA 629
Query 2535 GGAGCGCCTGGCCATCCTGGACAGTCAGGCTGGGCAGATCCGGGCTCAGGCCGTGCAGGAGTCAGAACGCCTGG 2608
|||||||||.||..|.|||||||||||||||||||||||||||||.|||||.||.|||||||||||.||.||||
Sbjct 630 GGAGCGCCTAGCTGTACTGGACAGTCAGGCTGGGCAGATCCGGGCCCAGGCAGTACAGGAGTCAGAGCGTCTGG 703
Query 2609 CCCGGGACAAGAATGCCTCCTTACAGCTGCTGCAAAAGGAGAAGGAGAAGCTGACTGTGCTGGAAAGGAGATAC 2682
|||||||.||||||||..||.|.|||||.|||||||||||||||||||||||||.|||.||.||.|||||||||
Sbjct 704 CCCGGGAAAAGAATGCTGCCCTGCAGCTACTGCAAAAGGAGAAGGAGAAGCTGAATGTCCTTGAGAGGAGATAC 777
Query 2683 CACTCACTCACAGGGGGCAGGCCTTTCCCGAAGACCACATCGACCCTCAAAGAGGTTTACCGCTCCAAGATGGA 2756
||.||.|||||.||||||||||||||.|||||||||||.||.||||||||||||||||||||||||||||||||
Sbjct 778 CATTCGCTCACGGGGGGCAGGCCTTTTCCGAAGACCACCTCCACCCTCAAAGAGGTTTACCGCTCCAAGATGGA 851
Query 2757 TGGCGAGGCCACCAGCCCCCTTCCCCGGACCCGCAGCGGCCCCCTCCCCTCCTCCTCTGGCTCTTCCTCCTCCT 2830
|.|.||.||..||||||||||.|||.|||||||.||||||||.||||||||||||||.|||||.||||||||||
Sbjct 852 TAGTGATGCGGCCAGCCCCCTGCCCAGGACCCGTAGCGGCCCTCTCCCCTCCTCCTCAGGCTCCTCCTCCTCCT 925
Query 2831 CCTCCCAGCTCAGCGTGGCTACCCTGGGGCGTAGCCCCTCCCCAAAGAGCGCTCTACTCACCCAGAATGGCACG 2904
|.||.|||||||||||||||||||||||.|||||.||.|||||||||||.|||||.|||.|||||||||||||.
Sbjct 926 CTTCACAGCTCAGCGTGGCTACCCTGGGCCGTAGTCCTTCCCCAAAGAGTGCTCTGCTCGCCCAGAATGGCACC 999
Query 2905 GGCAGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGACATCGAGACCAAGCGCCAACTAGCTCTGCAGCAGAA 2978
.|.||||||||||||||||||||||||||||||||||||||.||||||||||||||.||.||.||.|||||.||
Sbjct 1000 AGTAGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCCTACAGCAAAA 1073
Query 2979 GGGACAACAAGTGATTGAAGAGCAGCGGCGGCGACTGGCTGAGCTGAAGCAGAAAGCGGCAGCTGAGGCACAGT 3052
||||||.||||||||.||.|||||.|||.||.|||||||.||||||||||||||.|||||.||.|||||.||||
Sbjct 1074 GGGACACCAAGTGATCGAGGAGCAACGGAGGAGACTGGCGGAGCTGAAGCAGAAGGCGGCGGCAGAGGCTCAGT 1147
Query 3053 GCCAGTGGGATGCCCTTCACGGGGCAGCACCCTTCCCAGCGGGCCCCTCGGGCTTCCCCCCTCTCATGCACCAC 3126
||||||||||||||.|.||.||.||||..|||||..||||.|||||.||.||||||||..|.||||||||.||.
Sbjct 1148 GCCAGTGGGATGCCTTGCATGGTGCAGGGCCCTTTTCAGCAGGCCCTTCAGGCTTCCCTGCACTCATGCATCAT 1221
Query 3127 TCTATCCTACACCACCTGCCTGCGGGGCGGGAGCGTGGGGAGGAGGGTGAGCACGCCTATGATACGCTGAGTCT 3200
||.|||||.||.||||||||.||.||.|||||||||||.||||||||.||||||||.||.||.||.|||||.||
Sbjct 1222 TCCATCCTGCATCACCTGCCAGCTGGCCGGGAGCGTGGAGAGGAGGGCGAGCACGCTTACGACACCCTGAGCCT 1295
Query 3201 GGAGAGCTCTGACAGCATGGAGACCAGCATCTCCACCGGGGGCAACTCGGCCTGCTCCCCTGACAACATGTCCA 3274
||||||.||.|||||||||||||||||||||||.||.||.||||||||.|||||.|||||.|||||||||||||
Sbjct 1296 GGAGAGTTCAGACAGCATGGAGACCAGCATCTCTACAGGCGGCAACTCTGCCTGTTCCCCGGACAACATGTCCA 1369
Query 3275 GCGCGAGTGGTCTGGACATGGGGAAGATCGAGGAGATGGAGAAGATGCTGAAAGAGGCTCATGCAGAGAAGAAC 3348
||||.|||||||||||||||||.|||||||||||.||||||||||||||.||.||.|||||.||||||||||.|
Sbjct 1370 GCGCCAGTGGTCTGGACATGGGCAAGATCGAGGAAATGGAGAAGATGCTAAAGGAAGCTCACGCAGAGAAGAGC 1443
Query 3349 CGGCTCATGGAGTCGAGGGAGCGGGAGATGGAGCTGCGGCGGCAGGCCCTGGAGGAGGAGCGGCGGAGGCGTGA 3422
||||||||||||||.||||||||||||||||||||.|||.|||||||||||||||||||.|||.|||||||.||
Sbjct 1444 CGGCTCATGGAGTCCAGGGAGCGGGAGATGGAGCTTCGGAGGCAGGCCCTGGAGGAGGAACGGAGGAGGCGGGA 1517
Query 3423 GCAGGTAGAACGGAGGCTGCAGAGTGAGAGTGCCCGGAGGCAGCAGCTGGTCGAGAAGGAGGTCAAGATGCGGG 3496
|||.||.||.|||.||||||||||||||||.|||||.||||||||||||||.|||||.||.||||||.|.||||
Sbjct 1518 GCAAGTGGAGCGGCGGCTGCAGAGTGAGAGCGCCCGCAGGCAGCAGCTGGTGGAGAAAGAAGTCAAGCTCCGGG 1591
Query 3497 AGAAACAATTTTCCCAGGCACGACCCCTGACCCGCTACCTGCCAATCCGGAAGGAGGACTTTGACCTGAAGACA 3570
|.||.||.||.|||||||||||.||.||.||.||.|||||.||.|.||||||||||||||||||.||||||||.
Sbjct 1592 AAAAGCAGTTCTCCCAGGCACGGCCTCTTACACGTTACCTTCCCAACCGGAAGGAGGACTTTGATCTGAAGACC 1665
Query 3571 CATATTGAGTCATCGGGCCATGGTGTTGATACCTGCCTGCACGTGGTGCTCAGCAGCAAGGTCTGCCGTGGCTA 3644
||.||.||||||||.|||||.||.||.||.||||||||.||.||||||||.|||||||||||.|||||||||||
Sbjct 1666 CACATAGAGTCATCAGGCCACGGGGTGGACACCTGCCTACATGTGGTGCTTAGCAGCAAGGTGTGCCGTGGCTA 1739
Query 3645 CTTGGTCAAGATGGGCGGCAAGATTAAATCATGGAAGAAGCGCTGGTTTGTCTTCGACCGGCTCAAGCGCACCC 3718
|.||.||||||||||.||||||||||||||.|||||||||||||||||||||||.||.|||||.||||||||||
Sbjct 1740 CCTGATCAAGATGGGTGGCAAGATTAAATCGTGGAAGAAGCGCTGGTTTGTCTTTGATCGGCTGAAGCGCACCC 1813
Query 3719 TTTCCTATTATGTGGACAAGCATGAGACGAAGCTGAAGGGAGTCATCTATTTCCAGGCCATTGAGGAAGTGTAC 3792
||||||||||.||||||||.||||||||||||||||||||.||||||||||||||||||||.||||||||||||
Sbjct 1814 TTTCCTATTACGTGGACAAACATGAGACGAAGCTGAAGGGGGTCATCTATTTCCAGGCCATCGAGGAAGTGTAC 1887
Query 3793 TACGACCACCTGCGCAGTGCAGCCAAGAGCCCGAACCCAGCCCTCACCTTCTGCGTAAAGACCCATGACCGGCT 3866
||.||||||||||||||.|||||||||||.|||||.||.||||||||||||||.||.|||||||||||||||.|
Sbjct 1888 TATGACCACCTGCGCAGCGCAGCCAAGAGTCCGAATCCGGCCCTCACCTTCTGTGTGAAGACCCATGACCGGTT 1961
Query 3867 GTACTACATGGTGGCCCCATCTGCAGAGGCCATGCGTATCTGGATGGATGTCATTGTCACAGGGGCTGAGGGCT 3940
||||||||||||||||||.|||||||||||||||||.|||||||||||||||||.|||||.|||||.|||||||
Sbjct 1962 GTACTACATGGTGGCCCCGTCTGCAGAGGCCATGCGCATCTGGATGGATGTCATCGTCACGGGGGCCGAGGGCT 2035
Query 3941 ACACTCAGTTCATGAACTAAAC 3962
|||||||.|||||||||
Sbjct 2036 ACACTCAATTCATGAAC----- 2052
