Nucleotide Global Alignment
Description
- Query:
- TRCN0000488190
- Subject:
- XM_017313091.2
- Aligned Length:
- 4656
- Identities:
- 1686
- Gaps:
- 2734
Alignment
Query 1 ATGGACGCTCTCAATAGGAACCAAATAGGCCCTGGATGCCAGACCCAGACCATGGTGCAGAAAGGACCCTTGGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CCTGATCGAGACAGGCAAAGGGCTGAAAGTGCAAACGGACAAACCCCACCTGGTGAGCCTGGGCAGTGGGCGAC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TCAGCACAGCCATCACCCTCCTGCCGCTGGAGGAAGGGAGGACGGTGATTGGCTCTGCAGCCAGAGACATCTCA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CTACAGGGCCCAGGCCTGGCTCCAGAGCACTGCTACATCGAGAACCTGCGGGGCACCCTCACCCTCTACCCCTG 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TGGCAATGCCTGCACTATTGATGGGCTCCCTGTCCGGCAGCCTACCCGGCTCACTCAGGGCTGCATGTTGTGCC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TGGGTCAGTCCACCTTCCTTCGCTTTAACCACCCGGCTGAAGCCAAGTGGATGAAAAGCATGATTCCAGCAGGG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GGCCGAGCCCCTGGGCCCCCCTACAGCCCTGTTCCTGCAGAATCAGAAAGTCTGGTAAATGGGAACCACACCCC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 ACAGACTGCAACACGGGGACCCTCTGCCTGTGCCAGCCACAGTTCCCTGGTGAGCTCTATTGAGAAGGACCTGC 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 AAGAGATCATGGACTCACTGGTGCTAGAGGAGCCTGGAGCTGCTGGCAAGAAGCCTGCCGCAACCTCTCCACTG 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 TCACCGATGGCTAATGGTGGGCGCTACCTGCTGTCTCCCCCAACCAGCCCCGGCGCCATGTCTGTGGGCTCCAG 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 CTATGAGAACACCTCTCCAGCCTTCTCTCCACTCTCTTCACCAGCCAGCAGTGGAAGCTGTGCCAGTCACTCAC 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 CCAGTGGGCAAGAGCCAGGACCTTCTGTGCCCCCGCTGGTACCTGCCCGTTCCTCCAGCTACCATCTGGCCCTA 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 CAGCCCCCACAGTCCCGCCCAAGTGGTGCTCGCTCCGAGAGTCCTCGGCTGAGCAGGAAAGGGGGCCATGAGAG 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 GCCTCCCAGCCCTGGCCTCCGGGGTCTGCTGACAGACAGCCCTGCAGCTACTGTCTTGGCGGAGGCCCGGAGAG 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 CCACTGAGAGCCCCCGGCTGGGTGGGCAGCTGCCTGTGGTGGCCATCAGCCTGAGTGAATACCCAGCTTCTGGT 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 GCTCTCAGTCAACCCACCAGCATTCCTGGCAGCCCCAAGTTTCAGCCTCCAGTCCCTGCTCCCCGAAACAAGAT 1184
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1185 TGGCACACTCCAGGACCGCCCTCCCAGCCCTTTCCGTGAGCCTCCAGGCAGTGAGCGGGTGCTAACAACCAGCC 1258
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1259 CCTCACGCCAACTGGTGGGCCGAACATTTTCAGATGGGTTAGCCACCCGTACCCTGCAGCCTCCTGAGAGTCCC 1332
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1333 CGCCTGGGCCGGCGGGGCCTGGACAGTATGCGAGAACTACCCCCCTTAAGTCCATCTCTGTCCCGGCGAGCTCT 1406
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1407 CTCCCCGCTGCCCACCCGGACCACCCCAGATCCCAAGCTAAACAGGGAAGTGGCAGAGAGTCCTCGGCCCCGGC 1480
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1481 GCTGGGCAGCCCATGGGGCTTCACCAGAGGACTTCTCCCTGACGCTGGGGGCACGGGGCCGTAGGACACGGAGC 1554
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1555 CCCTCACCCACACTGGGTGAGTCTCTGGCACCCCACAAGGGCAGCTTCAGTGGCAGGCTGAGCCCAGCCTACAG 1628
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1629 TCTGGGCTCTCTTACTGGGGCTTCACCCTGCCAGAGTCCCTGTGTCCAGAGGAAGCTCTCCAGCGGGGACTTGC 1702
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1703 GGGTGCCTGTCACAAGGGAGCGGAAAAATAGCATCACAGAGATCAGTGACAATGAGGACGACCTCCTGGAGTAC 1776
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1777 CACCGGCGACAGCGCCAAGAGCGGCTCCGGGAGCAGGAGATGGAGAGGCTGGAACGCCAGCGCCTGGAGACCAT 1850
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1851 CCTGAACCTGTGTGCCGAATACAGCCGGGCTGATGGGGGACCTGAGGCTGGGGAGCTTCCCAGCATTGGGGAGG 1924
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1925 CCACCGCAGCATTGGCACTGGCAGGCCGGAGGCCCTCACGAGGCCTTGCAGGGGCCTCTGGGCGGAGCAGCGAG 1998
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1999 GAGCCTGGCGTTGCCACCCAACGCCTATGGGAGAGTATGGAGCGCTCAGATGAGGAAAATCTCAAGGAGGAGTG 2072
|||||||||||.|||||.||.||||||||.|||||.||
Sbjct 1 ------------------------------------ATGGAGCGCTCTGATGAAGAGAATCTCAAAGAGGAATG 38
Query 2073 CAGCAGCACTGAGAGCACCCAGCAGGAGCACGAAGATGCACCTAGCACCAAGCTCCAGGGAGAGGTGCTAGCCC 2146
|||||||||.||||||||||||||||||||.|||||.||.|||.||.|.||||.|||.||.||||||||.||..
Sbjct 39 CAGCAGCACCGAGAGCACCCAGCAGGAGCATGAAGACGCTCCTGGCGCGAAGCACCAAGGCGAGGTGCTGGCTG 112
Query 2147 TGGAAGAAGAGCGGGCTCAGGTGCTGGGGCACGTGGAGCAGCTCAAGGTCCGTGTGAAGGAGCTAGAGCAGCAG 2220
|||||||.||||||||||||||.|||||||..||.||.|||||.|||.||||.|||||||||||.||.||||||
Sbjct 113 TGGAAGAGGAGCGGGCTCAGGTTCTGGGGCGAGTAGAACAGCTGAAGATCCGAGTGAAGGAGCTGGAACAGCAG 186
Query 2221 CTGCAGGAGTCAGCCCGAGAGGCCGAAATGGAGCGGGCACTGCTGCAGGGAGAGAGGGAGGCAGAGCGGGCACT 2294
|||||||||.||||||||||||||||.||||||.|.||||||||||||||.|||.|||||||||||||.|| ||
Sbjct 187 CTGCAGGAGGCAGCCCGAGAGGCCGAGATGGAGAGAGCACTGCTGCAGGGGGAGCGGGAGGCAGAGCGAGC-CT 259
Query 2295 -GCTGCAGAAGGAGCAGAAGGCAGTGGATCAGCTGCAGGAGAAGCTGGTGGCCTTGGAGACAGGCATCCAGAAG 2367
||||||||||||.||.|.|||.|||||.|||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 260 CGCTGCAGAAGGAACAAAGGGCGGTGGACCAGCTGCAGGAGAAGTTGGTGGCCTTGGAGACAGGCATCCAGAAG 333
Query 2368 GAGAGGGACAA--------------------------------------------------------------- 2378
||.||||||||
Sbjct 334 GACAGGGACAAGGAGAGGGCGGAGCTGGCCGCGGGACGGAGGCACCTGGAGGCCCGCCAGGCGCTCTACGCCGA 407
Query 2379 ------------------------------------------------------------------GGAGGCAG 2386
||||||||
Sbjct 408 GCTCCAGACGCAGCTCGATAACTGCCCCGAGTCAGTGCGGGAACAGTTACAGGAGCAGCTGAGAAGGGAGGCAG 481
Query 2387 AGGCCCTGGAGACTGAGACAAAGCTCTTTGAGGACTTGGAGTTCCAGCAGTTGGAGCGGGAGAGCCGCGTGGAG 2460
|.||.||.|||||||||||||||||||||||||||.||||||||||||||.|||||||.|||||.|||||||||
Sbjct 482 ACGCTCTAGAGACTGAGACAAAGCTCTTTGAGGACCTGGAGTTCCAGCAGCTGGAGCGTGAGAGTCGCGTGGAG 555
Query 2461 GAGGAGCGCGAGCTGGCCGGCCAGGGGCTGCTCCGGAGCAAGGCTGAGCTGCTCCGCAGCATCGCCAAGAGGAA 2534
||||||||.||||||||||||||.||||||||.|||||||||||||||.||||.|||||..|...|||||||||
Sbjct 556 GAGGAGCGGGAGCTGGCCGGCCAAGGGCTGCTGCGGAGCAAGGCTGAGTTGCTGCGCAGTGTGAGCAAGAGGAA 629
Query 2535 GGAGCGCCTGGCCATCCTGGACAGTCAGGCTGGGCAGATCCGGGCTCAGGCCGTGCAGGAGTCAGAACGCCTGG 2608
|||||||||.||..|.|||||||||||||||||||||||||||||.|||||.||.|||||||||||.||.||||
Sbjct 630 GGAGCGCCTAGCTGTACTGGACAGTCAGGCTGGGCAGATCCGGGCCCAGGCAGTACAGGAGTCAGAGCGTCTGG 703
Query 2609 CCCGGGACAAGAATGCCTCCTTACAGCTGCTGCAAAAGGAGAAGGAGAAGCTGACTGTGCTGGAAAGGAGATAC 2682
|||||||.||||||||..||.|.|||||.|||||||||||||||||||||||||.|||.||.||.|||||||||
Sbjct 704 CCCGGGAAAAGAATGCTGCCCTGCAGCTACTGCAAAAGGAGAAGGAGAAGCTGAATGTCCTTGAGAGGAGATAC 777
Query 2683 CACTCACTCACAGGGGGCAGGCCTTTCCCGAAGACCACATCGACCCTCAAAG---------------------- 2734
||.||.|||||.||||||||||||||.|||||||||||.||.||||||||||
Sbjct 778 CATTCGCTCACGGGGGGCAGGCCTTTTCCGAAGACCACCTCCACCCTCAAAGAGGCTCAGCTACTCATCTCCGA 851
Query 2735 -------------------------------------------------------------------------- 2734
Sbjct 852 GGCCTCAGAGATAGGGCTGGAGACCAAAGCTCTGGGCCAGTCCCCAAGGTCTTCTGAGGCTGGGGCCTCCTCTG 925
Query 2735 -------------------------------------------------------------------------- 2734
Sbjct 926 TTCTCTTAACCCCTCCTGCTTCCACTCAGCTCTGTCCCAAAGCACAAGAGTACGTGACGCTTGAGCAGCTAAGA 999
Query 2735 -------------------------------------------------------------------------- 2734
Sbjct 1000 GTGGTGTGGGGCACCCCACCCATGCCCCCAAGCCCTTCGCCAGGCCTGCCTTCCTGGGCTTCTGCCTCCCAGGA 1073
Query 2735 -------------------------------------------------------------------------- 2734
Sbjct 1074 CTTGGCTCCCATCACCTGTCTTCCTCCCATGCTGCCCTCTTCCTTCGCTTCCATCACACGTTCGTCTAAGATGG 1147
Query 2735 -------------------------------------------------------------------------- 2734
Sbjct 1148 AGAAGCTGCTGCTCCCTGCTGTAGACTTAGAGCAGTGGTACCAGGAGTTGATGTCCGGGCTGGGGACTGGCCTT 1221
Query 2735 -------------------------------------------------------------AGGTTTACCGCTC 2747
|||||||||||||
Sbjct 1222 GCTGCAGCCTCCCCTCGCTCCTCTCCCCCGCCTTTGCCTGCCAAAGCTTCCCGTCAGCTGCAGGTTTACCGCTC 1295
Query 2748 CAAGATGGATGGCGAGGCCACCAGCCCCCTTCCCCGGACCCGCAGCGGCCCCCTCCCCTCCTCCTCTGGCTCTT 2821
||||||||||.|.||.||..||||||||||.|||.|||||||.||||||||.||||||||||||||.|||||.|
Sbjct 1296 CAAGATGGATAGTGATGCGGCCAGCCCCCTGCCCAGGACCCGTAGCGGCCCTCTCCCCTCCTCCTCAGGCTCCT 1369
Query 2822 CCTCCTCCTCCTCCCAGCTCAGCGTGGCTACCCTGGGGCGTAGCCCCTCCCCAAAGAGCGCTCTACTCACCCAG 2895
||||||||||.||.|||||||||||||||||||||||.|||||.||.|||||||||||.|||||.|||.|||||
Sbjct 1370 CCTCCTCCTCTTCACAGCTCAGCGTGGCTACCCTGGGCCGTAGTCCTTCCCCAAAGAGTGCTCTGCTCGCCCAG 1443
Query 2896 AATGGCACGGGCAGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGACATCGAGACCAAGCGCCAACTAGCTCT 2969
||||||||..|.||||||||||||||||||||||||||||||||||||||.||||||||||||||.||.||.||
Sbjct 1444 AATGGCACCAGTAGCCTTCCTCGCAACCTGGCAGCCACACTGCAGGACATTGAGACCAAGCGCCAGCTGGCCCT 1517
Query 2970 GCAGCAGAAG---------------------------------------------GGACAACAAGTGATTGAAG 2998
.|||||.||| |||||.||||||||.||.|
Sbjct 1518 ACAGCAAAAGGTCGAGTTACCTCCTGCCGAGCCCCTCCCACCTGAAGACCCAGCAGGACACCAAGTGATCGAGG 1591
Query 2999 AGCAGCGGCGGCGACTGGCTGAGCTGAAGCAGAAAGCGGCAGCTGAGGCACAGTGCCAGTGGGATGCCCTTCAC 3072
||||.|||.||.|||||||.||||||||||||||.|||||.||.|||||.||||||||||||||||||.|.||.
Sbjct 1592 AGCAACGGAGGAGACTGGCGGAGCTGAAGCAGAAGGCGGCGGCAGAGGCTCAGTGCCAGTGGGATGCCTTGCAT 1665
Query 3073 GGGGCAGCACCCTTCCCAGCGGGCCCCTCGGGCTTCCCCCCTCTCATGCACCACTCTATCCTACACCACCTGCC 3146
||.||||..|||||..||||.|||||.||.||||||||..|.||||||||.||.||.|||||.||.||||||||
Sbjct 1666 GGTGCAGGGCCCTTTTCAGCAGGCCCTTCAGGCTTCCCTGCACTCATGCATCATTCCATCCTGCATCACCTGCC 1739
Query 3147 TGCGGGGCGGGAGCGTGGGGAGGAGGGTGAGCACGCCTATGATACGCTGAGTCTGGAGAGCTCTGACAGCATGG 3220
.||.||.|||||||||||.||||||||.||||||||.||.||.||.|||||.||||||||.||.||||||||||
Sbjct 1740 AGCTGGCCGGGAGCGTGGAGAGGAGGGCGAGCACGCTTACGACACCCTGAGCCTGGAGAGTTCAGACAGCATGG 1813
Query 3221 AGACCAGCATCTCCACCGGGGGCAACTCGGCCTGCTCCCCTGACAACATGTCCAGCGCGAGTGGTCTGGACATG 3294
|||||||||||||.||.||.||||||||.|||||.|||||.|||||||||||||||||.|||||||||||||||
Sbjct 1814 AGACCAGCATCTCTACAGGCGGCAACTCTGCCTGTTCCCCGGACAACATGTCCAGCGCCAGTGGTCTGGACATG 1887
Query 3295 GGGAAGATCGAGGAGATGGAGAAGATGCTGAAAGAGGCTCATGCAGAGAAGAACCGGCTCATGGAGTCGAG--- 3365
||.|||||||||||.||||||||||||||.||.||.|||||.||||||||||.|||||||||||||||.||
Sbjct 1888 GGCAAGATCGAGGAAATGGAGAAGATGCTAAAGGAAGCTCACGCAGAGAAGAGCCGGCTCATGGAGTCCAGGGT 1961
Query 3366 ------------------------------GGAGCGGGAGATGGAGCTGCGGCGGCAGGCCCTGGAGGAGGAGC 3409
||||||||||||||||||.|||.|||||||||||||||||||.|
Sbjct 1962 GAGGCTGACTGGAGCCAGGAGGCAGCAGGTGGAGCGGGAGATGGAGCTTCGGAGGCAGGCCCTGGAGGAGGAAC 2035
Query 3410 GGCGGAGGCGTGAGCAGGTAGAACGGAGGCTGCAGAGTGAGAGTGCCCGGAGGCAGCAGCTGGTCGAGAAGGAG 3483
||.|||||||.|||||.||.||.|||.||||||||||||||||.|||||.||||||||||||||.|||||.||.
Sbjct 2036 GGAGGAGGCGGGAGCAAGTGGAGCGGCGGCTGCAGAGTGAGAGCGCCCGCAGGCAGCAGCTGGTGGAGAAAGAA 2109
Query 3484 GTCAAGATGCGGGAGAAACAATTTTCCCAGGCACGACCCCTGACCCGCTACCTGCCAATCCGGAAGGAGGACTT 3557
||||||.|.|||||.||.||.||.|||||||||||.||.||.||.||.|||||.||.|.|||||||||||||||
Sbjct 2110 GTCAAGCTCCGGGAAAAGCAGTTCTCCCAGGCACGGCCTCTTACACGTTACCTTCCCAACCGGAAGGAGGACTT 2183
Query 3558 TGACCTGAAGACACATATTGAGTCATCGGGCCATGGTGTTGATACCTGCCTGCACGTGGTGCTCAGCAGCAAGG 3631
|||.||||||||.||.||.||||||||.|||||.||.||.||.||||||||.||.||||||||.||||||||||
Sbjct 2184 TGATCTGAAGACCCACATAGAGTCATCAGGCCACGGGGTGGACACCTGCCTACATGTGGTGCTTAGCAGCAAGG 2257
Query 3632 TCTGCCGTGGCTACTTGGTCAAGATGGGCGGCAAGATTAAATCATGGAAGAAGCGCTGGTTTGTCTTCGACCGG 3705
|.||||||||||||.||.||||||||||.||||||||||||||.|||||||||||||||||||||||.||.|||
Sbjct 2258 TGTGCCGTGGCTACCTGATCAAGATGGGTGGCAAGATTAAATCGTGGAAGAAGCGCTGGTTTGTCTTTGATCGG 2331
Query 3706 CTCAAGCGCACCCTTTCCTATTATGTGGACAAGCATGAGACGAAGCTGAAGGGAGTCATCTATTTCCAGGCCAT 3779
||.||||||||||||||||||||.||||||||.||||||||||||||||||||.||||||||||||||||||||
Sbjct 2332 CTGAAGCGCACCCTTTCCTATTACGTGGACAAACATGAGACGAAGCTGAAGGGGGTCATCTATTTCCAGGCCAT 2405
Query 3780 TGAGGAAGTGTACTACGACCACCTGCGCAGTGCAGCC---------------------------------AAGA 3820
.||||||||||||||.||||||||||||||.|||||| ||||
Sbjct 2406 CGAGGAAGTGTACTATGACCACCTGCGCAGCGCAGCCAAGAAAAGGTTTTTCCACTTCACCATGGTGACTAAGA 2479
Query 3821 GCCCGAACCCAGCCCTCACCTTCTGCGTAAAGACCCATGACCGGCTGTACTACATGGTGGCCCCATCTGCAGAG 3894
|.|||||.||.||||||||||||||.||.|||||||||||||||.|||||||||||||||||||.|||||||||
Sbjct 2480 GTCCGAATCCGGCCCTCACCTTCTGTGTGAAGACCCATGACCGGTTGTACTACATGGTGGCCCCGTCTGCAGAG 2553
Query 3895 GCCATGCGTATCTGGATGGATGTCATTGTCACAGGGGCTGAGGGCTACACTCAGTTCATGAACTAAAC 3962
||||||||.|||||||||||||||||.|||||.|||||.||||||||||||||.|||||||||
Sbjct 2554 GCCATGCGCATCTGGATGGATGTCATCGTCACGGGGGCCGAGGGCTACACTCAATTCATGAAC----- 2616
