Nucleotide Global Alignment

Description

Query:
TRCN0000488229
Subject:
XR_001779956.1
Aligned Length:
3997
Identities:
640
Gaps:
3267

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATACTTCCCAGTTTGGGTATGATGCTGACCTAAAGCTGATGGGTCTGTGTACACTGGAAGAGGTGGGGCTCATG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGTAATGCAGCATCAGAGGGAGGAATTGCTTATGTAACTTGGACAACAGATTTAGCAGCGCGAAAAGAGGCAGA  148

Query    1  --------ATGGGAGCAGTAAGCTGTCGGCAGGGGCAGCACACCCAGCAGGGGGAACACACCCGGGTGGCTGTC  66
                    ||||||||||||||||||||||||||.|                  ||||||||||||||.|||..
Sbjct  149  GGCTGGAAATGGGAGCAGTAAGCTGTCGGCAGGGAC------------------AACACACCCGGGTGTCTGCT  204

Query   67  CCTCACAAGCAGGGTGGCAACATCCGGGGTCCCTGGGCCCGAGGCTGGAAGAGCCTCTGGACAGGTTTGGGAAC  140
            |||||.||||||||||.||||||||.|||||.|||||.||.|||||||||||||||||||...|||.||||.||
Sbjct  205  CCTCAGAAGCAGGGTGACAACATCCAGGGTCACTGGGTCCAAGGCTGGAAGAGCCTCTGGTGTGGTATGGGGAC  278

Query  141  CATCAGGTCAGATCTGGAAGAACTCTGGGAACTACGGGGGCACCACTATCTGCACCAGGA----ATCCCTAAAG  210
            |||||||||||.||||||||||||.||||.|||||.|.||||.||.|..||.||.|||||    .|||    ||
Sbjct  279  CATCAGGTCAGGTCTGGAAGAACTATGGGGACTACAGAGGCATCAGTGCCTACATCAGGAGCTGCTCC----AG  348

Query  211  CCAGCCCCAGTACTGGTAGAGAAGCCTCTGCCAGAGTGGCCAGTGCCTCAGTTCATCAACCTCTTTCTACCAGA  284
            |||||||||.|.||..||||||||||||.|.|.|||||||||||||||||||||||||.|||||||||||||||
Sbjct  349  CCAGCCCCACTGCTACTAGAGAAGCCTCAGTCTGAGTGGCCAGTGCCTCAGTTCATCAGCCTCTTTCTACCAGA  422

Query  285  GTTTCCCATTAGGCCCATTAGGGGGCAGCAGCAGCTGAAGATTTTAGGCCTCGTGGCTAAAGGCTCCTTTGGAA  358
            |||||||.|.|||||..||||||.|||||||.|||||||||||||||||||.|||||||||||.||.|||||||
Sbjct  423  GTTTCCCGTGAGGCCTGTTAGGGAGCAGCAGGAGCTGAAGATTTTAGGCCTTGTGGCTAAAGGTTCGTTTGGAA  496

Query  359  CTGTCCTCAAGGTGCTAGATTGCACCCAGAAAGCTGTATTTGCAGTGAAGGTGGTGCCCAAGGTAAAGGTCCTA  432
            |||||||.||.|||||||||||..|||||||||||||||||||||||||||||||||||||.|||||.||.|||
Sbjct  497  CTGTCCTGAAAGTGCTAGATTGTGCCCAGAAAGCTGTATTTGCAGTGAAGGTGGTGCCCAAAGTAAAAGTTCTA  570

Query  433  CAGAGGGATACCGTGAGGCAGTGCAAAGAGGAGGTTAGCATCCAGCGACAGATCAACCATCCCTTTGTACACAG  506
            |||.|||||||..||||||||||||||||.|||||||||||||||                             
Sbjct  571  CAGCGGGATACGCTGAGGCAGTGCAAAGAAGAGGTTAGCATCCAG-----------------------------  615

Query  507  CTTGGGGGACAGCTGGCAGGGAAAACGGCACCTTTTCATTATGTGTAGCTACTGCAGCACAGATCTGTACTCCC  580
                                                     ||||||||||||||||||..|||||.|||||||
Sbjct  616  -----------------------------------------TGTGTAGCTACTGCAGCATGGATCTCTACTCCC  648

Query  581  TTTGGTCGGCTGTTGGCTGCTTTCCTGAGGCTTCCATCCGTCTCTTTGCTGCCGAGTTGGTGCTGGTACTGTGT  654
            |.|||||..|||||||.||.|||||.||||.|||.||||||||||||||.||.||..||||.||.|||||||||
Sbjct  649  TGTGGTCTACTGTTGGTTGGTTTCCAGAGGATTCTATCCGTCTCTTTGCAGCTGAACTGGTCCTTGTACTGTGT  722

Query  655  --------------------------------------------------------------------------  654
                                                                                      
Sbjct  723  AAGTGCAAATGTGGTAAAGGAAATAAAAAGGGGGAAATTAAGTTAGTGGGGAGGAGAAACAGAATTAATATTTA  796

Query  655  --------------------------------------------------------------------------  654
                                                                                      
Sbjct  797  ATTTTGGAAGTCAGGATAGAGGAGAGATAGGGGCTACAAAGAAACTGGCAGACACACCCATGCCCACTGTTCTC  870

Query  655  -------TATCTCCATGACTTGGGCATCATGCATCGAGATGTGA------------------------------  691
                   ||||||||.||||||||.|||||.||.||.|||||.|                              
Sbjct  871  CACAGGCTATCTCCACGACTTGGGTATCATCCACCGTGATGTAAAGGTAGAGTTAAGTCTTTTCTCTTAAGTTG  944

Query  692  --------------------------------------------------------------------------  691
                                                                                      
Sbjct  945  AGCAAGGATCTCAAGAAGTTTCCACAGATCTGAGAAGGCAGTAGGAAGCAGAGACGGTTATTTGGGTTCCTATG  1018

Query  692  --------------------------------------------------------------------------  691
                                                                                      
Sbjct 1019  GATGCGAAGGATTTGGGTGTGGGTCCTCCAAGTATAGGCTTGAGTGCTGAGTAGACTACCTTCTCCAGCTAGCA  1092

Query  692  --------------------------------------------------------------------------  691
                                                                                      
Sbjct 1093  GCTCTACGGGAAAGAATGCCAGGTGTGGTCATACATGTCTATTCCCCAGCACTGTTGGGAGGCAGGAGGAGTGC  1166

Query  692  --------------------------------------------------------------------------  691
                                                                                      
Sbjct 1167  CATATGTGAGGCTGGTATATAAAATTCCCAGCTGGCCTGAGCTACACAGTAACACCCTATGTCAAAAATAACAA  1240

Query  692  ---------------------------------------------------------------AGATGGAGAAT  702
                                                                           |||||||||||
Sbjct 1241  CAATGAAAAACCAAATCAGAGCCAAAGGAAAAAGTAAGATAATGTCCTCTTGCCCATGATTTCAGATGGAGAAT  1314

Query  703  ATTCTTCTAGATGAACG---------------------------------------------------------  719
            ||.||.||.||||||||                                                         
Sbjct 1315  ATCCTGCTGGATGAACGAGGTATGTCTTTTCCTTCTTTAGCCCCAGGACAAGTGGTACCTCTTAAAAAACAAAA  1388

Query  720  ------------------------------------------------------------AGGCCATCTGAAAC  733
                                                                        |||||||||||||.
Sbjct 1389  CCAAAGTGAAACAAAAAACAAACAAACAAACATGGGTTGAACATAGTTTCCTTACTTCGTAGGCCATCTGAAAG  1462

Query  734  TGACAGACTTTGGTCTGTCCCGCCACGTGCCCCAGGGAGCTCAAGCCTACACTATCTGTGGCACTCTTCAGTAC  807
            |||||||||||||||||||.||||||.|..||||||||||.|.|||||||||||||||.|||||||||||.|||
Sbjct 1463  TGACAGACTTTGGTCTGTCTCGCCACCTATCCCAGGGAGCACGAGCCTACACTATCTGCGGCACTCTTCAATAC  1536

Query  808  ATGGGTGAGAGAG--------GT---------------------------------------------------  822
            |||||||||||||        ||                                                   
Sbjct 1537  ATGGGTGAGAGAGAAGCTAAAGTTGGTAGGGAAGGTGACTTAAGGATGTGAGTGACAGCCCGGTGTGGTGGCGC  1610

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 1611  ACGCCTTTAATCCCAGCACTAGGGAGGCAGAAGCAGGCAGATTTCTGAGTTCCAGGCCAGCCTGGTCTACAAAG  1684

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 1685  TGAGTTTCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCAAAAAAACAAAAACAAAAAATAAATAAATGA  1758

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 1759  ATGAAAAGATGTGAGTGACAAGTACCTTTCGTGCCACAGCCCCAGAGGTCCTGAGTGGTGGGCCTTACAACCAC  1832

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 1833  ACTGCTGACTGGTGGTCCCTGGGTGTGTTGCTTTTCTCTCTGGCAACTGGTAAGGTGAGAGAATGGTTAGTGGT  1906

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 1907  GTTGAACAGGGAAGAGAGTTTTGCTTTGTGGTGGAAAAAGACCTTAGAAAGCCTTGCCTTCCCACCCTTTAACT  1980

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 1981  CAGTTTCCAGTGGCTGCAGAGAGAGATCATGTGGCTATGTTGGCAAGTGTGGCCCACTGTGAATCTGAGATCCC  2054

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 2055  AGCGTCTATTAATCAGGAGCTCTCACTCCTGCTCCATGAGCTCTTATGCCAGAACCCTCTGCATCGTCTACGAT  2128

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 2129  ACCTGCATCACTTCCAGGTCCACCCGTTCTTTCGGGGTGTAGCCTTTGACCCTGAGCTCCTACAGAAGCAGCCA  2202

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 2203  GTGAACTTTGTCATGGAGAAACAAGATACCTGGCCTAGTCCACTGGAGTCCATGTCCTTCGAGGACTTTGACTA  2276

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 2277  TGATCTGGAGTCCTTGGTCCACTCCATCTCTATTGATTCCTATTGATTCTCTAGTGTGGATAGGCACTCAGCCA  2350

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 2351  GAAACCACTCAGTACCACCATTATAATGATCCAGTTTTTACTTTGTTGTTCTATTGTAGGTACTGGGCTAGAGT  2424

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 2425  TTAATCTTTGGCATTCTGCAGCTGATAGCCAAAACTGCCCCTACGCTTTCCTATCATACAACCCCTCTCAGTTC  2498

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 2499  GGGTCAAGGCAATGGCCTTCACTTCTCCAGTACTTTCACTTGAGCTGCCAAACAAAGGCTTCTTGAACTTGACC  2572

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 2573  TTATTCATGTTTTTCTACCATACTTTTTTGGGCAATAATGAAACTCTGGGGACTTCCAAGGTGCTATTTAGATG  2646

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 2647  TTTTAACAAGTTAATCAGATGCCAGGTGGTGCCAGGTGGCACTTGTCCCTGCATTGAGGACACAGAGGCAGGTA  2720

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 2721  GATCTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGTTCCAGGATACTCAGGAATACACAAAGAAACCCTGTCTC  2794

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 2795  AGGAAAAAAAAATTACAAGGATTATTAAATTGATTGTTTCTTCCATACAACCCAAGATTTAGAGTTGGTTTTGT  2868

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 2869  TTTTTTTCCGCTTTTGAACTGGACCAGCAGAGGATCAGGGGATCAGAAAATGAAGAAGGAAAGTATAGGATCAG  2942

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 2943  GTCTTGCCCAAGCTATATCTTATGCCACACCAAGCAGGCTTATTTTATTAAGTACAGCATCGCATATACAGGAA  3016

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3017  AAAGGGGAAAAAGGGATAGAATCATCAAAAAACTGACTTAGAGTGGACTGAAGTCAGCAGGAAGCTAATCAGGC  3090

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3091  AATGTTGAATGAAGGGAAACAAATGCATCACAGAGGAGCACATCGCAGCCTTGGGGCTAATAGCCTTGTAGGGG  3164

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3165  GAAAGAGTTCATTTCTCATATATAAAGCAGCAGCTCCCCCAGGGTCCTGACCCCAGACCGTTATTGGCTTTGCT  3238

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3239  AAGCATAGTCCTTAGTTTAGACAAGGAACTTCATTCCTCCACACATCAGGCCTCAGGGAAAACCTTAGGTTAGA  3312

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3313  TCAGCCTGGCTCCCCATCCCAACACCTTTAGTTTTAAGATCCAGGGATGTTGTGTTGTTACTGTTTAATTTTGT  3386

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3387  GATCCTAGGGACCACACCGAGGGCCTTTATATACTAGGTATCTACTTAGTCACATTCCCAGTGAACGTTCATCC  3460

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3461  AGGTTCCTTCTCCCCGAGACATCTCTTTAAATGCCAAAGCTGGAATATTAAACTTACCCAGGCAGACCTTGCTT  3534

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3535  GTGATCTTCCTGCTTTGATCTTCCAAATGGCTGAGATTATAGGCCTGTACCACAAGGCCTATGCTAAGATTGGG  3608

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3609  TTTTGATGAACAAATGAAAGGATTGAGGGCCATGGCATTAAATTTAGCATTTAGAGTTATAGATGTATCTCGAG  3682

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3683  AATATTCTCCTCTTGTAAGGAAAATCATCCAGGCCTTTTATGTAACTTCTGGTCTTTTTTCATTTTCCTCAATT  3756

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3757  CTCAAAAGTTCCATTTTTGTTGTGATCTTTTTTAGGGTTTTTAAAATGTTTATGTGTATGAGTAATTTTACCTG  3830

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 3831  CAAGTATGTACTCTCCAGCCCCTTTGTTCTGACATTTAAGGAAAAGTGTGCTTTAATCTAGATTATTATTTTCC  3904

Query  823  -  822
             
Sbjct 3905  A  3905

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