Nucleotide Global Alignment

Description

Query:
TRCN0000488229
Subject:
XR_388407.3
Aligned Length:
1441
Identities:
700
Gaps:
641

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATACTTCCCAGTTTGGGTATGATGCTGACCTAAAGCTGATGGGTCTGTGTACACTGGAAGAGGTGGGGCTCATG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGTAATGCAGCATCAGAGGGAGGAATTGCTTATGTAACTTGGACAACAGATTTAGCAGCGCGAAAAGAGGCAGA  148

Query    1  --------ATGGGAGCAGTAAGCTGTCGGCAGGGGCAGCACACCCAGCAGGGGGAACACACCCGGGTGGCTGTC  66
                    ||||||||||||||||||||||||||.|                  ||||||||||||||.|||..
Sbjct  149  GGCTGGAAATGGGAGCAGTAAGCTGTCGGCAGGGAC------------------AACACACCCGGGTGTCTGCT  204

Query   67  CCTCACAAGCAGGGTGGCAACATCCGGGGTCCCTGGGCCCGAGGCTGGAAGAGCCTCTGGACAGGTTTGGGAAC  140
            |||||.||||||||||.||||||||.|||||.|||||.||.|||||||||||||||||||...|||.||||.||
Sbjct  205  CCTCAGAAGCAGGGTGACAACATCCAGGGTCACTGGGTCCAAGGCTGGAAGAGCCTCTGGTGTGGTATGGGGAC  278

Query  141  CATCAGGTCAGATCTGGAAGAACTCTGGGAACTACGGGGGCACCACTATCTGCACCAGGA----ATCCCTAAAG  210
            |||||||||||.||||||||||||.||||.|||||.|.||||.||.|..||.||.|||||    .|||    ||
Sbjct  279  CATCAGGTCAGGTCTGGAAGAACTATGGGGACTACAGAGGCATCAGTGCCTACATCAGGAGCTGCTCC----AG  348

Query  211  CCAGCCCCAGTACTGGTAGAGAAGCCTCTGCCAGAGTGGCCAGTGCCTCAGTTCATCAACCTCTTTCTACCAGA  284
            |||||||||.|.||..||||||||||||.|.|.|||||||||||||||||||||||||.|||||||||||||||
Sbjct  349  CCAGCCCCACTGCTACTAGAGAAGCCTCAGTCTGAGTGGCCAGTGCCTCAGTTCATCAGCCTCTTTCTACCAGA  422

Query  285  GTTTCCCATTAGGCCCATTAGGGGGCAGCAGCAGCTGAAGATTTTAGGCCTCGTGGCTAAAGGCTCCTTTGGAA  358
            |||||||.|.|||||..||||||.|||||||.|||||||||||||||||||.|||||||||||.||.|||||||
Sbjct  423  GTTTCCCGTGAGGCCTGTTAGGGAGCAGCAGGAGCTGAAGATTTTAGGCCTTGTGGCTAAAGGTTCGTTTGGAA  496

Query  359  CTGTCCTCAAGGTGCTAGATTGCACCCAGAAAGCTGTATTTGCAGTGAAGGTGGTGCCCAAGGTAAAGGTCCTA  432
            |||||||.||.|||||||||||..|||||||||||||||||||||||||||||||||||||.|||||.||.|||
Sbjct  497  CTGTCCTGAAAGTGCTAGATTGTGCCCAGAAAGCTGTATTTGCAGTGAAGGTGGTGCCCAAAGTAAAAGTTCTA  570

Query  433  CAGAGGGATACCGTGAGGCAGTGCAAAGAGGAGGTTAGCATCCAGCGACAGATCAACCATCCCTTTGTACACAG  506
            |||.|||||||..||||||||||||||||.||||||||||||||||||||||||||||||||.|||||||||||
Sbjct  571  CAGCGGGATACGCTGAGGCAGTGCAAAGAAGAGGTTAGCATCCAGCGACAGATCAACCATCCTTTTGTACACAG  644

Query  507  CTTGGGGGACAGCTGGCAGGGAAAACGGCACCTTTTCATTATGTGTAGCTACTGCAGCACAGATCTGTACTCCC  580
            .||||||||||||||||||||.||||..|||||.||.||||||||||||||||||||||..|||||.|||||||
Sbjct  645  TTTGGGGGACAGCTGGCAGGGGAAACAACACCTCTTTATTATGTGTAGCTACTGCAGCATGGATCTCTACTCCC  718

Query  581  TTTGGTCGGCTGTTGGCTGCTTTCCTGAGGCTTCCATCCGTCTCTTTGCTGCCGAGTTGGTGCTGGTACTGTGT  654
            |.|||||..|||||||.||.|||||.||||.|||.||||||||||||||.||.||..||||.||.||||||||.
Sbjct  719  TGTGGTCTACTGTTGGTTGGTTTCCAGAGGATTCTATCCGTCTCTTTGCAGCTGAACTGGTCCTTGTACTGTGC  792

Query  655  TATCTCCATGACTTGGGCATCATGCATCGAGATGTGAAGATGGAGAATATTCTTCTAGATGAACGAGGCCATCT  728
            ||||||||.||||||||.|||||.||.||.|||||.||||||||||||||.||.||.|||||||||||||||||
Sbjct  793  TATCTCCACGACTTGGGTATCATCCACCGTGATGTAAAGATGGAGAATATCCTGCTGGATGAACGAGGCCATCT  866

Query  729  GAAACTGACAGACTTTGGTCTGTCCCGCCACGTGCCCCAGGGAGCTCAAGCCTACACTATCTGTGGCACTCTTC  802
            ||||.|||||||||||||||||||.||||||.|..||||||||||.|.|||||||||||||||.||||||||||
Sbjct  867  GAAAGTGACAGACTTTGGTCTGTCTCGCCACCTATCCCAGGGAGCACGAGCCTACACTATCTGCGGCACTCTTC  940

Query  803  AGTACATGGGT-------------GAGAGAGGT-----------------------------------------  822
            |.|||||||.|             |||||||.|                                         
Sbjct  941  AATACATGGTTTCCAGTGGCTGCAGAGAGAGATCATGTGGCTATGTTGGCAAGTGTGGCCCACTGTGAATCTGA  1014

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 1015  GATCCCAGCGTCTATTAATCAGGAGCTCTCACTCCTGCTCCATGAGCTCTTATGCCAGAACCCTCTGCATCGTC  1088

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 1089  TACGATACCTGCATCACTTCCAGGTCCACCCGTTCTTTCGGGGTGTAGCCTTTGACCCTGAGCTCCTACAGAAG  1162

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 1163  CAGCCAGTGAACTTTGTCATGGAGAAACAAGATACCTGGCCTAGTCCACTGGAGTCCATGTCCTTCGAGGACTT  1236

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 1237  TGACTATGATCTGGAGTCCTTGGTCCACTCCATCTCTATTGATTCCTATTGATTCTCTAGTGTGGATAGGCACT  1310

Query  823  --------------------------------------------------------------------------  822
                                                                                      
Sbjct 1311  CAGCCAGAAACCACTCAGTACCACCATTATAATGATCCAGTTTTTACTTTGTTGTTCTATTGTAGGTACTGGGC  1384

Query  823  -----------------------------------  822
                                               
Sbjct 1385  TAGAGTTTAATCTTTGGCATTCTGCAGCTGATAGC  1419