Nucleotide Global Alignment
Description
- Query:
- TRCN0000488229
- Subject:
- XR_388408.3
- Aligned Length:
- 3399
- Identities:
- 697
- Gaps:
- 2602
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATACTTCCCAGTTTGGGTATGATGCTGACCTAAAGCTGATGGGTCTGTGTACACTGGAAGAGGTGGGGCTCATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGTAATGCAGCATCAGAGGGAGGAATTGCTTATGTAACTTGGACAACAGATTTAGCAGCGCGAAAAGAGGCAGA 148
Query 1 --------ATGGGAGCAGTAAGCTGTCGGCAGGGGCAGCACACCCAGCAGGGGGAACACACCCGGGTGGCTGTC 66
||||||||||||||||||||||||||.| ||||||||||||||.|||..
Sbjct 149 GGCTGGAAATGGGAGCAGTAAGCTGTCGGCAGGGAC------------------AACACACCCGGGTGTCTGCT 204
Query 67 CCTCACAAGCAGGGTGGCAACATCCGGGGTCCCTGGGCCCGAGGCTGGAAGAGCCTCTGGACAGGTTTGGGAAC 140
|||| ||.||||||.||||||||.|||||.|||||.||.|||||||||||||||||||...|||.||||.||
Sbjct 205 CCTC---AGAAGGGTGACAACATCCAGGGTCACTGGGTCCAAGGCTGGAAGAGCCTCTGGTGTGGTATGGGGAC 275
Query 141 CATCAGGTCAGATCTGGAAGAACTCTGGGAACTACGGGGGCACCACTATCTGCACCAGGA----ATCCCTAAAG 210
|||||||||||.||||||||||||.||||.|||||.|.||||.||.|..||.||.||||| .||| ||
Sbjct 276 CATCAGGTCAGGTCTGGAAGAACTATGGGGACTACAGAGGCATCAGTGCCTACATCAGGAGCTGCTCC----AG 345
Query 211 CCAGCCCCAGTACTGGTAGAGAAGCCTCTGCCAGAGTGGCCAGTGCCTCAGTTCATCAACCTCTTTCTACCAGA 284
|||||||||.|.||..||||||||||||.|.|.|||||||||||||||||||||||||.|||||||||||||||
Sbjct 346 CCAGCCCCACTGCTACTAGAGAAGCCTCAGTCTGAGTGGCCAGTGCCTCAGTTCATCAGCCTCTTTCTACCAGA 419
Query 285 GTTTCCCATTAGGCCCATTAGGGGGCAGCAGCAGCTGAAGATTTTAGGCCTCGTGGCTAAAGGCTCCTTTGGAA 358
|||||||.|.|||||..||||||.|||||||.|||||||||||||||||||.|||||||||||.||.|||||||
Sbjct 420 GTTTCCCGTGAGGCCTGTTAGGGAGCAGCAGGAGCTGAAGATTTTAGGCCTTGTGGCTAAAGGTTCGTTTGGAA 493
Query 359 CTGTCCTCAAGGTGCTAGATTGCACCCAGAAAGCTGTATTTGCAGTGAAGGTGGTGCCCAAGGTAAAGGTCCTA 432
|||||||.||.|||||||||||..|||||||||||||||||||||||||||||||||||||.|||||.||.|||
Sbjct 494 CTGTCCTGAAAGTGCTAGATTGTGCCCAGAAAGCTGTATTTGCAGTGAAGGTGGTGCCCAAAGTAAAAGTTCTA 567
Query 433 CAGAGGGATACCGTGAGGCAGTGCAAAGAGGAGGTTAGCATCCAGCGACAGATCAACCATCCCTTTGTACACAG 506
|||.|||||||..||||||||||||||||.||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 568 CAGCGGGATACGCTGAGGCAGTGCAAAGAAGAGGTTAGCATCCAGCGACAGATCAACCATCCTTTTGTACACAG 641
Query 507 CTTGGGGGACAGCTGGCAGGGAAAACGGCACCTTTTCATTATGTGTAGCTACTGCAGCACAGATCTGTACTCCC 580
.||||||||||||||||||||.||||..|||||.||.||||||||||||||||||||||..|||||.|||||||
Sbjct 642 TTTGGGGGACAGCTGGCAGGGGAAACAACACCTCTTTATTATGTGTAGCTACTGCAGCATGGATCTCTACTCCC 715
Query 581 TTTGGTCGGCTGTTGGCTGCTTTCCTGAGGCTTCCATCCGTCTCTTTGCTGCCGAGTTGGTGCTGGTACTGTGT 654
|.|||||..|||||||.||.|||||.||||.|||.||||||||||||||.||.||..||||.||.||||||||.
Sbjct 716 TGTGGTCTACTGTTGGTTGGTTTCCAGAGGATTCTATCCGTCTCTTTGCAGCTGAACTGGTCCTTGTACTGTGC 789
Query 655 TATCTCCATGACTTGGGCATCATGCATCGAGATGTGA------------------------------------- 691
||||||||.||||||||.|||||.||.||.|||||.|
Sbjct 790 TATCTCCACGACTTGGGTATCATCCACCGTGATGTAAAGGTAGAGTTAAGTCTTTTCTCTTAAGTTGAGCAAGG 863
Query 692 -------------------------------------------------------------------------- 691
Sbjct 864 ATCTCAAGAAGTTTCCACAGATCTGAGAAGGCAGTAGGAAGCAGAGACGGTTATTTGGGTTCCTATGGATGCGA 937
Query 692 -------------------------------------------------------------------------- 691
Sbjct 938 AGGATTTGGGTGTGGGTCCTCCAAGTATAGGCTTGAGTGCTGAGTAGACTACCTTCTCCAGCTAGCAGCTCTAC 1011
Query 692 -------------------------------------------------------------------------- 691
Sbjct 1012 GGGAAAGAATGCCAGGTGTGGTCATACATGTCTATTCCCCAGCACTGTTGGGAGGCAGGAGGAGTGCCATATGT 1085
Query 692 -------------------------------------------------------------------------- 691
Sbjct 1086 GAGGCTGGTATATAAAATTCCCAGCTGGCCTGAGCTACACAGTAACACCCTATGTCAAAAATAACAACAATGAA 1159
Query 692 --------------------------------------------------------AGATGGAGAATATTCTTC 709
|||||||||||||.||.|
Sbjct 1160 AAACCAAATCAGAGCCAAAGGAAAAAGTAAGATAATGTCCTCTTGCCCATGATTTCAGATGGAGAATATCCTGC 1233
Query 710 TAGATGAACG---------------------------------------------------------------- 719
|.||||||||
Sbjct 1234 TGGATGAACGAGGTATGTCTTTTCCTTCTTTAGCCCCAGGACAAGTGGTACCTCTTAAAAAACAAAACCAAAGT 1307
Query 720 -----------------------------------------------------AGGCCATCTGAAACTGACAGA 740
|||||||||||||.|||||||
Sbjct 1308 GAAACAAAAAACAAACAAACAAACATGGGTTGAACATAGTTTCCTTACTTCGTAGGCCATCTGAAAGTGACAGA 1381
Query 741 CTTTGGTCTGTCCCGCCACGTGCCCCAGGGAGCTCAAGCCTACACTATCTGTGGCACTCTTCAGTACATGGGT- 813
||||||||||||.||||||.|..||||||||||.|.|||||||||||||||.|||||||||||.|||||||.|
Sbjct 1382 CTTTGGTCTGTCTCGCCACCTATCCCAGGGAGCACGAGCCTACACTATCTGCGGCACTCTTCAATACATGGTTT 1455
Query 814 ------------GAGAGAGGT----------------------------------------------------- 822
|||||||.|
Sbjct 1456 CCAGTGGCTGCAGAGAGAGATCATGTGGCTATGTTGGCAAGTGTGGCCCACTGTGAATCTGAGATCCCAGCGTC 1529
Query 823 -------------------------------------------------------------------------- 822
Sbjct 1530 TATTAATCAGGAGCTCTCACTCCTGCTCCATGAGCTCTTATGCCAGAACCCTCTGCATCGTCTACGATACCTGC 1603
Query 823 -------------------------------------------------------------------------- 822
Sbjct 1604 ATCACTTCCAGGTCCACCCGTTCTTTCGGGGTGTAGCCTTTGACCCTGAGCTCCTACAGAAGCAGCCAGTGAAC 1677
Query 823 -------------------------------------------------------------------------- 822
Sbjct 1678 TTTGTCATGGAGAAACAAGATACCTGGCCTAGTCCACTGGAGTCCATGTCCTTCGAGGACTTTGACTATGATCT 1751
Query 823 -------------------------------------------------------------------------- 822
Sbjct 1752 GGAGTCCTTGGTCCACTCCATCTCTATTGATTCCTATTGATTCTCTAGTGTGGATAGGCACTCAGCCAGAAACC 1825
Query 823 -------------------------------------------------------------------------- 822
Sbjct 1826 ACTCAGTACCACCATTATAATGATCCAGTTTTTACTTTGTTGTTCTATTGTAGGTACTGGGCTAGAGTTTAATC 1899
Query 823 -------------------------------------------------------------------------- 822
Sbjct 1900 TTTGGCATTCTGCAGCTGATAGCCAAAACTGCCCCTACGCTTTCCTATCATACAACCCCTCTCAGTTCGGGTCA 1973
Query 823 -------------------------------------------------------------------------- 822
Sbjct 1974 AGGCAATGGCCTTCACTTCTCCAGTACTTTCACTTGAGCTGCCAAACAAAGGCTTCTTGAACTTGACCTTATTC 2047
Query 823 -------------------------------------------------------------------------- 822
Sbjct 2048 ATGTTTTTCTACCATACTTTTTTGGGCAATAATGAAACTCTGGGGACTTCCAAGGTGCTATTTAGATGTTTTAA 2121
Query 823 -------------------------------------------------------------------------- 822
Sbjct 2122 CAAGTTAATCAGATGCCAGGTGGTGCCAGGTGGCACTTGTCCCTGCATTGAGGACACAGAGGCAGGTAGATCTC 2195
Query 823 -------------------------------------------------------------------------- 822
Sbjct 2196 TGAGTTTGAGGCCAGCCTGGTCTACAGAGTTCCAGGATACTCAGGAATACACAAAGAAACCCTGTCTCAGGAAA 2269
Query 823 -------------------------------------------------------------------------- 822
Sbjct 2270 AAAAAATTACAAGGATTATTAAATTGATTGTTTCTTCCATACAACCCAAGATTTAGAGTTGGTTTTGTTTTTTT 2343
Query 823 -------------------------------------------------------------------------- 822
Sbjct 2344 TCCGCTTTTGAACTGGACCAGCAGAGGATCAGGGGATCAGAAAATGAAGAAGGAAAGTATAGGATCAGGTCTTG 2417
Query 823 -------------------------------------------------------------------------- 822
Sbjct 2418 CCCAAGCTATATCTTATGCCACACCAAGCAGGCTTATTTTATTAAGTACAGCATCGCATATACAGGAAAAAGGG 2491
Query 823 -------------------------------------------------------------------------- 822
Sbjct 2492 GAAAAAGGGATAGAATCATCAAAAAACTGACTTAGAGTGGACTGAAGTCAGCAGGAAGCTAATCAGGCAATGTT 2565
Query 823 -------------------------------------------------------------------------- 822
Sbjct 2566 GAATGAAGGGAAACAAATGCATCACAGAGGAGCACATCGCAGCCTTGGGGCTAATAGCCTTGTAGGGGGAAAGA 2639
Query 823 -------------------------------------------------------------------------- 822
Sbjct 2640 GTTCATTTCTCATATATAAAGCAGCAGCTCCCCCAGGGTCCTGACCCCAGACCGTTATTGGCTTTGCTAAGCAT 2713
Query 823 -------------------------------------------------------------------------- 822
Sbjct 2714 AGTCCTTAGTTTAGACAAGGAACTTCATTCCTCCACACATCAGGCCTCAGGGAAAACCTTAGGTTAGATCAGCC 2787
Query 823 -------------------------------------------------------------------------- 822
Sbjct 2788 TGGCTCCCCATCCCAACACCTTTAGTTTTAAGATCCAGGGATGTTGTGTTGTTACTGTTTAATTTTGTGATCCT 2861
Query 823 -------------------------------------------------------------------------- 822
Sbjct 2862 AGGGACCACACCGAGGGCCTTTATATACTAGGTATCTACTTAGTCACATTCCCAGTGAACGTTCATCCAGGTTC 2935
Query 823 -------------------------------------------------------------------------- 822
Sbjct 2936 CTTCTCCCCGAGACATCTCTTTAAATGCCAAAGCTGGAATATTAAACTTACCCAGGCAGACCTTGCTTGTGATC 3009
Query 823 -------------------------------------------------------------------------- 822
Sbjct 3010 TTCCTGCTTTGATCTTCCAAATGGCTGAGATTATAGGCCTGTACCACAAGGCCTATGCTAAGATTGGGTTTTGA 3083
Query 823 -------------------------------------------------------------------------- 822
Sbjct 3084 TGAACAAATGAAAGGATTGAGGGCCATGGCATTAAATTTAGCATTTAGAGTTATAGATGTATCTCGAGAATATT 3157
Query 823 -------------------------------------------------------------------------- 822
Sbjct 3158 CTCCTCTTGTAAGGAAAATCATCCAGGCCTTTTATGTAACTTCTGGTCTTTTTTCATTTTCCTCAATTCTCAAA 3231
Query 823 -------------------------------------------------------------------------- 822
Sbjct 3232 AGTTCCATTTTTGTTGTGATCTTTTTTAGGGTTTTTAAAATGTTTATGTGTATGAGTAATTTTACCTGCAAGTA 3305
Query 823 --------------------------------------------------------------------- 822
Sbjct 3306 TGTACTCTCCAGCCCCTTTGTTCTGACATTTAAGGAAAAGTGTGCTTTAATCTAGATTATTATTTTCCA 3374
