Nucleotide Global Alignment

Description

Query:
TRCN0000488275
Subject:
NR_136343.1
Aligned Length:
2460
Identities:
1198
Gaps:
1180

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTGGACGCGGTCAAACGATGCCCCGCAGCCTCCTGGGTCTCAGCACATATTCCACACCTACGTCCCCTGACCTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCTCCTAGAAGCTGGAGAGAGCAGGAGCCTTCGGTGGGGCAGCTCAAAATGTAGGTAACTGCGGGCCAGGAGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGCGCCCAACCTGTAGCGCTGCGCTACCCAACCATCGGTCCCTGCCTTTGAGCGTCGACGGCTGATCTTTTGGT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TTGAGGGAGAGACTGGCGCTGGAGTTTTGAATTCCGAATCATGTGCAGAATGCTGAATCTTCCCCCAGCCAGGA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CGAATAAGACAGCGCGGAAAAGCAGATTCTCGTAATTCTGGAATTGCATGTTGCAAGGAGTCTCCTGGATCTTC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCACCCAGCTTCGGGTAGGGAGGGAGTCCGGGTCCCGGGCTAGGCCAGCCCGGCAGGTGGAGAGGGTCCCCGGC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AGCCCCGCGCGCCCCTGGCCATGTCTTTAATGCCCTGCCCCTTCATGTGGCCTTCTGAGGGTTCCCAGGGCTGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CCAGGGTTGTTTCCCACCCGCGCGCGCGCTCTCACCCCCAGCCAAACCCACCTGGCAGGGCTCCCTCCAGCCGA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GACCTTTTGATTCCCGGCTCCCGCGCTCCCGCCTCCGCGCCAGCCCGGGAGGTGGCCCTGGACAGCCGGACCTC  666

Query    1  --------------------ATGGTGTTTCTCTCGGGAAATGCTTCCGACAGCTCCAACTGCACCCAACCGCCG  54
                                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GCCCGGCCCCGGCTGGGACCATGGTGTTTCTCTCGGGAAATGCTTCCGACAGCTCCAACTGCACCCAACCGCCG  740

Query   55  GCACCGGTGAACATTTCCAAGGCCATTCTGCTCGGGGTGATCTTGGGGGGCCTCATTCTTTTCGGGGTGCTGGG  128
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GCACCGGTGAACATTTCCAAGGCCATTCTGCTCGGGGTGATCTTGGGGGGCCTCATTCTTTTCGGGGTGCTGGG  814

Query  129  TAACATCCTAGTGATCCTCTCCGTAGCCTGTCACCGACACCTGCACTCAGTCACGCACTACTACATCGTCAACC  202
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TAACATCCTAGTGATCCTCTCCGTAGCCTGTCACCGACACCTGCACTCAGTCACGCACTACTACATCGTCAACC  888

Query  203  TGGCGGTGGCCGACCTCCTGCTCACCTCCACGGTGCTGCCCTTCTCCGCCATCTTCGAGGTCCTAGGCTACTGG  276
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TGGCGGTGGCCGACCTCCTGCTCACCTCCACGGTGCTGCCCTTCTCCGCCATCTTCGAGGTCCTAGGCTACTGG  962

Query  277  GCCTTCGGCAGGGTCTTCTGCAACATCTGGGCGGCAGTGGATGTGCTGTGCTGCACCGCGTCCATCATGGGCCT  350
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GCCTTCGGCAGGGTCTTCTGCAACATCTGGGCGGCAGTGGATGTGCTGTGCTGCACCGCGTCCATCATGGGCCT  1036

Query  351  CTGCATCATCTCCATCGACCGCTACATCGGCGTGAGCTACCCGCTGCGCTACCCAACCATCGTCACCCAGAGGA  424
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CTGCATCATCTCCATCGACCGCTACATCGGCGTGAGCTACCCGCTGCGCTACCCAACCATCGTCACCCAGAGGA  1110

Query  425  GGGGTCTCATGGCTCTGCTCTGCGTCTGGGCACTCTCCCTGGTCATATCCATTGGACCCCTGTTCGGCTGGAGG  498
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GGGGTCTCATGGCTCTGCTCTGCGTCTGGGCACTCTCCCTGGTCATATCCATTGGACCCCTGTTCGGCTGGAGG  1184

Query  499  CAGCCGGCCCCCGAGGACGAGACCATCTGCCAGATCAACGAGGAGCCGGGCTACGTGCTCTTCTCAGCGCTGGG  572
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CAGCCGGCCCCCGAGGACGAGACCATCTGCCAGATCAACGAGGAGCCGGGCTACGTGCTCTTCTCAGCGCTGGG  1258

Query  573  CTCCTTCTACCTGCCTCTGGCCATCATCCTGGTCATGTACTGCCGCGTCTACGTGGTGGCCAAGAGGGAGAGCC  646
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CTCCTTCTACCTGCCTCTGGCCATCATCCTGGTCATGTACTGCCGCGTCTACGTGGTGGCCAAGAGGGAGAGCC  1332

Query  647  GGGGCCTCAAGTCTGGCCTCAAGACCGACAAGTCGGACTCGGAGCAAGTGACGCTCCGCATCCATCGGAAAAAC  720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GGGGCCTCAAGTCTGGCCTCAAGACCGACAAGTCGGACTCGGAGCAAGTGACGCTCCGCATCCATCGGAAAAAC  1406

Query  721  GCCCCGGCAGGAGGCAGCGGGATGGCCAGCGCCAAGACCAAGACGCACTTCTCAGTGAGGCTCCTCAAGTTCTC  794
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GCCCCGGCAGGAGGCAGCGGGATGGCCAGCGCCAAGACCAAGACGCACTTCTCAGTGAGGCTCCTCAAGTTCTC  1480

Query  795  CCGGGAGAAGAAAGCGGCCAAAACGCTGGGCATCGTGGTCGGCTGCTTCGTCCTCTGCTGGCTGCCTTTTTTCT  868
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CCGGGAGAAGAAAGCGGCCAAAACGCTGGGCATCGTGGTCGGCTGCTTCGTCCTCTGCTGGCTGCCTTTTTTCT  1554

Query  869  TAGTCATGCCCATTGGGTCTTTCTTCC--------------CTGATTT-----CAAGCCCTCT-----------  912
            |||||||||||||||||.|.|.|.|.|              |||.|||     .|||..||.|           
Sbjct 1555  TAGTCATGCCCATTGGGACATACATTCTTAAATATGACGTGCTGTTTTGGAGAAAAGGGCTGTCGGTCTGCACT  1628

Query  913  --------------GAAACAGTTT------TTAAAATAGTATTTTGGCTCGGA---------TATCTAAACAGC  957
                          ||||.||.||      |.|||..||      |||..|||         ||||  .|||||
Sbjct 1629  AGGCTGCGGGAGAGGAAAGAGATTAAAAACTGAAACCAG------GGCAGGGATGAGTGTGCTATC--CACAGC  1694

Query  958  TGCATCAACCCCA----TCATATACCCATGCT--------------CCAGCCAAGAGTTCAAA--AAGGC----  1007
            ||          |    |.|.|.|||||||.|              ||||..||   .|||.|  |||.|    
Sbjct 1695  TG----------AGAAGTGAAACACCCATGTTTAATAGGGACTGACCCAGGAAA---ATCAGACGAAGTCTCGC  1755

Query 1008  -CTTTCAGAATGTCTTGAGAATCCAGTG----------------------TCTCCGC------------AGAAA  1046
             ||.|||..| |.||.|||  |.|||||                      .||||||            |||.|
Sbjct 1756  TCTGTCACCA-GGCTGGAG--TGCAGTGGCATGATCTTGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGAGA  1826

Query 1047  ----------GCAGTCTTCCAAACATGCCCTGGG-CTACACCCTG--------CACC-------CGCCCAGCCA  1094
                      .|||.||.||||.||   .||||| |||||    |        ||||       ||||  .|||
Sbjct 1827  TTCTCCTGCCTCAGCCTCCCAAGCA---GCTGGGACTACA----GGGATGTGCCACCAGGCCGACGCC--ACCA  1891

Query 1095  GGCC---------------------GTGGA---AGGGCAACACAAGGACATGGTGCGCATCCCCGTGGGATCAA  1144
            ||||                     ||.||   .|||...|||     ||||.||..||        ||||   
Sbjct 1892  GGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCAC-----CATGTTGGCCA--------GGAT---  1949

Query 1145  GA----GA------GACCTTCTACAGGATCT---------------CCAA------GACGGAT----GGCGT--  1181
            ||    ||      |||||    ||.|||||               ||||      |  ||||    |||||  
Sbjct 1950  GATCTCGATCTCTTGACCT----CATGATCTGCCTGCCTCAGCCTCCCAAAGTGCTG--GGATTACAGGCGTGA  2017

Query 1182  ----TTGTGAATGG---AA--ATTTTTCTCTTCCATGCCCCGTGGATCTGCCAGGATT----ACAGTGTCCAAA  1242
                ..|||...||   ||  ||||||.|.|           |..||||       ||    ||||||      
Sbjct 2018  GCCACCGTGCCCGGCCCAACTATTTTTTTTT-----------TTTATCT-------TTTTTAACAGTG------  2067

Query 1243  GACCAATCC-TCCTGTACCACAGCCCGGGTG-----------------------------AGAAGTAAAAGCTT  1286
               |||||| |.||||          ||.||                             ||||..||||.|  
Sbjct 2068  ---CAATCCTTTCTGT----------GGATGAAATCTTGCTCAGAAGCTCAATATGCAAAAGAAAGAAAAAC--  2126

Query 1287  TTTGCAGGTCTG--CTGCTGT-----GTAGGGCCCTCAACCCCCAGCCTTGAC-AAGAACCATCAAGTTCCAAC  1352
              .|||||.|||  |.|.|||     ||.|||   |.|..|||||.||   || .|||||||.|  ...|||||
Sbjct 2127  --AGCAGGGCTGGACGGATGTTGGGAGTGGGG---TAAGACCCCAACC---ACTCAGAACCACC--CCCCCAAC  2190

Query 1353  ---CATTAAGGTCCACACCATCTCCCTCA---------GTGAGAACGGG------GAGGAAGTC----------  1398
               ||        |||||..||||.| ||         |||||   |||      ||||  ||.          
Sbjct 2191  ACACA--------CACACATTCTCTC-CATGGTGACTGGTGAG---GGGCCTCTAGAGG--GTACATAGTACAC  2250

Query 1399  --------------------------------------------------------------------------  1398
                                                                                      
Sbjct 2251  CATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATCTTACCTTCCCATAGACACCC  2324

Query 1399  ------------------  1398
                              
Sbjct 2325  AGCCCATAGCCATTGGTT  2342

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