Nucleotide Global Alignment
Description
- Query:
- TRCN0000488275
- Subject:
- NR_136343.1
- Aligned Length:
- 2460
- Identities:
- 1198
- Gaps:
- 1180
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGGACGCGGTCAAACGATGCCCCGCAGCCTCCTGGGTCTCAGCACATATTCCACACCTACGTCCCCTGACCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCTCCTAGAAGCTGGAGAGAGCAGGAGCCTTCGGTGGGGCAGCTCAAAATGTAGGTAACTGCGGGCCAGGAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCGCCCAACCTGTAGCGCTGCGCTACCCAACCATCGGTCCCTGCCTTTGAGCGTCGACGGCTGATCTTTTGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGAGGGAGAGACTGGCGCTGGAGTTTTGAATTCCGAATCATGTGCAGAATGCTGAATCTTCCCCCAGCCAGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGAATAAGACAGCGCGGAAAAGCAGATTCTCGTAATTCTGGAATTGCATGTTGCAAGGAGTCTCCTGGATCTTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCACCCAGCTTCGGGTAGGGAGGGAGTCCGGGTCCCGGGCTAGGCCAGCCCGGCAGGTGGAGAGGGTCCCCGGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGCCCCGCGCGCCCCTGGCCATGTCTTTAATGCCCTGCCCCTTCATGTGGCCTTCTGAGGGTTCCCAGGGCTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCAGGGTTGTTTCCCACCCGCGCGCGCGCTCTCACCCCCAGCCAAACCCACCTGGCAGGGCTCCCTCCAGCCGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GACCTTTTGATTCCCGGCTCCCGCGCTCCCGCCTCCGCGCCAGCCCGGGAGGTGGCCCTGGACAGCCGGACCTC 666
Query 1 --------------------ATGGTGTTTCTCTCGGGAAATGCTTCCGACAGCTCCAACTGCACCCAACCGCCG 54
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCCCGGCCCCGGCTGGGACCATGGTGTTTCTCTCGGGAAATGCTTCCGACAGCTCCAACTGCACCCAACCGCCG 740
Query 55 GCACCGGTGAACATTTCCAAGGCCATTCTGCTCGGGGTGATCTTGGGGGGCCTCATTCTTTTCGGGGTGCTGGG 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GCACCGGTGAACATTTCCAAGGCCATTCTGCTCGGGGTGATCTTGGGGGGCCTCATTCTTTTCGGGGTGCTGGG 814
Query 129 TAACATCCTAGTGATCCTCTCCGTAGCCTGTCACCGACACCTGCACTCAGTCACGCACTACTACATCGTCAACC 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TAACATCCTAGTGATCCTCTCCGTAGCCTGTCACCGACACCTGCACTCAGTCACGCACTACTACATCGTCAACC 888
Query 203 TGGCGGTGGCCGACCTCCTGCTCACCTCCACGGTGCTGCCCTTCTCCGCCATCTTCGAGGTCCTAGGCTACTGG 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TGGCGGTGGCCGACCTCCTGCTCACCTCCACGGTGCTGCCCTTCTCCGCCATCTTCGAGGTCCTAGGCTACTGG 962
Query 277 GCCTTCGGCAGGGTCTTCTGCAACATCTGGGCGGCAGTGGATGTGCTGTGCTGCACCGCGTCCATCATGGGCCT 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GCCTTCGGCAGGGTCTTCTGCAACATCTGGGCGGCAGTGGATGTGCTGTGCTGCACCGCGTCCATCATGGGCCT 1036
Query 351 CTGCATCATCTCCATCGACCGCTACATCGGCGTGAGCTACCCGCTGCGCTACCCAACCATCGTCACCCAGAGGA 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CTGCATCATCTCCATCGACCGCTACATCGGCGTGAGCTACCCGCTGCGCTACCCAACCATCGTCACCCAGAGGA 1110
Query 425 GGGGTCTCATGGCTCTGCTCTGCGTCTGGGCACTCTCCCTGGTCATATCCATTGGACCCCTGTTCGGCTGGAGG 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GGGGTCTCATGGCTCTGCTCTGCGTCTGGGCACTCTCCCTGGTCATATCCATTGGACCCCTGTTCGGCTGGAGG 1184
Query 499 CAGCCGGCCCCCGAGGACGAGACCATCTGCCAGATCAACGAGGAGCCGGGCTACGTGCTCTTCTCAGCGCTGGG 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CAGCCGGCCCCCGAGGACGAGACCATCTGCCAGATCAACGAGGAGCCGGGCTACGTGCTCTTCTCAGCGCTGGG 1258
Query 573 CTCCTTCTACCTGCCTCTGGCCATCATCCTGGTCATGTACTGCCGCGTCTACGTGGTGGCCAAGAGGGAGAGCC 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CTCCTTCTACCTGCCTCTGGCCATCATCCTGGTCATGTACTGCCGCGTCTACGTGGTGGCCAAGAGGGAGAGCC 1332
Query 647 GGGGCCTCAAGTCTGGCCTCAAGACCGACAAGTCGGACTCGGAGCAAGTGACGCTCCGCATCCATCGGAAAAAC 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GGGGCCTCAAGTCTGGCCTCAAGACCGACAAGTCGGACTCGGAGCAAGTGACGCTCCGCATCCATCGGAAAAAC 1406
Query 721 GCCCCGGCAGGAGGCAGCGGGATGGCCAGCGCCAAGACCAAGACGCACTTCTCAGTGAGGCTCCTCAAGTTCTC 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GCCCCGGCAGGAGGCAGCGGGATGGCCAGCGCCAAGACCAAGACGCACTTCTCAGTGAGGCTCCTCAAGTTCTC 1480
Query 795 CCGGGAGAAGAAAGCGGCCAAAACGCTGGGCATCGTGGTCGGCTGCTTCGTCCTCTGCTGGCTGCCTTTTTTCT 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CCGGGAGAAGAAAGCGGCCAAAACGCTGGGCATCGTGGTCGGCTGCTTCGTCCTCTGCTGGCTGCCTTTTTTCT 1554
Query 869 TAGTCATGCCCATTGGGTCTTTCTTCC--------------CTGATTT-----CAAGCCCTCT----------- 912
|||||||||||||||||.|.|.|.|.| |||.||| .|||..||.|
Sbjct 1555 TAGTCATGCCCATTGGGACATACATTCTTAAATATGACGTGCTGTTTTGGAGAAAAGGGCTGTCGGTCTGCACT 1628
Query 913 --------------GAAACAGTTT------TTAAAATAGTATTTTGGCTCGGA---------TATCTAAACAGC 957
||||.||.|| |.|||..|| |||..||| |||| .|||||
Sbjct 1629 AGGCTGCGGGAGAGGAAAGAGATTAAAAACTGAAACCAG------GGCAGGGATGAGTGTGCTATC--CACAGC 1694
Query 958 TGCATCAACCCCA----TCATATACCCATGCT--------------CCAGCCAAGAGTTCAAA--AAGGC---- 1007
|| | |.|.|.|||||||.| ||||..|| .|||.| |||.|
Sbjct 1695 TG----------AGAAGTGAAACACCCATGTTTAATAGGGACTGACCCAGGAAA---ATCAGACGAAGTCTCGC 1755
Query 1008 -CTTTCAGAATGTCTTGAGAATCCAGTG----------------------TCTCCGC------------AGAAA 1046
||.|||..| |.||.||| |.||||| .|||||| |||.|
Sbjct 1756 TCTGTCACCA-GGCTGGAG--TGCAGTGGCATGATCTTGGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGAGA 1826
Query 1047 ----------GCAGTCTTCCAAACATGCCCTGGG-CTACACCCTG--------CACC-------CGCCCAGCCA 1094
.|||.||.||||.|| .||||| ||||| | |||| |||| .|||
Sbjct 1827 TTCTCCTGCCTCAGCCTCCCAAGCA---GCTGGGACTACA----GGGATGTGCCACCAGGCCGACGCC--ACCA 1891
Query 1095 GGCC---------------------GTGGA---AGGGCAACACAAGGACATGGTGCGCATCCCCGTGGGATCAA 1144
|||| ||.|| .|||...||| ||||.||..|| ||||
Sbjct 1892 GGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCAC-----CATGTTGGCCA--------GGAT--- 1949
Query 1145 GA----GA------GACCTTCTACAGGATCT---------------CCAA------GACGGAT----GGCGT-- 1181
|| || ||||| ||.||||| |||| | |||| |||||
Sbjct 1950 GATCTCGATCTCTTGACCT----CATGATCTGCCTGCCTCAGCCTCCCAAAGTGCTG--GGATTACAGGCGTGA 2017
Query 1182 ----TTGTGAATGG---AA--ATTTTTCTCTTCCATGCCCCGTGGATCTGCCAGGATT----ACAGTGTCCAAA 1242
..|||...|| || ||||||.|.| |..|||| || ||||||
Sbjct 2018 GCCACCGTGCCCGGCCCAACTATTTTTTTTT-----------TTTATCT-------TTTTTAACAGTG------ 2067
Query 1243 GACCAATCC-TCCTGTACCACAGCCCGGGTG-----------------------------AGAAGTAAAAGCTT 1286
|||||| |.|||| ||.|| ||||..||||.|
Sbjct 2068 ---CAATCCTTTCTGT----------GGATGAAATCTTGCTCAGAAGCTCAATATGCAAAAGAAAGAAAAAC-- 2126
Query 1287 TTTGCAGGTCTG--CTGCTGT-----GTAGGGCCCTCAACCCCCAGCCTTGAC-AAGAACCATCAAGTTCCAAC 1352
.|||||.||| |.|.||| ||.||| |.|..|||||.|| || .|||||||.| ...|||||
Sbjct 2127 --AGCAGGGCTGGACGGATGTTGGGAGTGGGG---TAAGACCCCAACC---ACTCAGAACCACC--CCCCCAAC 2190
Query 1353 ---CATTAAGGTCCACACCATCTCCCTCA---------GTGAGAACGGG------GAGGAAGTC---------- 1398
|| |||||..||||.| || ||||| ||| |||| ||.
Sbjct 2191 ACACA--------CACACATTCTCTC-CATGGTGACTGGTGAG---GGGCCTCTAGAGG--GTACATAGTACAC 2250
Query 1399 -------------------------------------------------------------------------- 1398
Sbjct 2251 CATGGAGCACGGTTTAAGCACCACTGGACTACACATTCTTCTGTGGCAGTTATCTTACCTTCCCATAGACACCC 2324
Query 1399 ------------------ 1398
Sbjct 2325 AGCCCATAGCCATTGGTT 2342
