Nucleotide Global Alignment
Description
- Query:
- TRCN0000488327
- Subject:
- XM_005270655.3
- Aligned Length:
- 5160
- Identities:
- 2373
- Gaps:
- 2784
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGATGAAACGGAGGCAAGAGAGACTGGGAGCACCATGTCTGCGGATTCAAATCTCTACCCTTTGCCGAGGAGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGAAGTAAACCAGCACATGTTTTCACCCACATCTGCTCCAGCCCTCTTCCTCACTAAAGTCCCATTTAGTGCTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATTGTGCTTTGGCTACTTCTCCTCTTGCCATTTTCCTGAACCCACGAGCCCACAGCAGTCCTGGCACTCCTTGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCAGCCGCCCACTGCCGTGGAGTTGTCGGACAAGTAACCGCAAGAGCTTGATTGTGACCTCTAGCACATCACC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TACACTACCACGGCCACACTCACCACTCCATGGCCACACAGGTAACAGTCCTTTGGACAGCCCCCGGAATTTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCCAAATGCACCTGCTCACTTTTCTTTTGTTCCTGCCCGTAGCCATAGCCACAGAGCTGACAGGACTGATGGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGGCGCTGGTCTTTGGCCTCTTTGCCCTCTTCAGGATATGGAACTAACACTCCTAGCTCCACTGTCTCATCATC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATGCTCCTCACAGGAAAAGCTGCATCAGTTGCCTTTCCAGCCTACAGCTGATGAGCTGCACTTTTTGACGAAGC 592
Query 1 --------------------------------------------------ATGCGGCCTCGCTCCCGGAGCCTC 24
||||||||||||||||||||||||
Sbjct 593 ATTTCAGCACAGAGAGCGTACCAGATGAGGAAGGACGGCAGTCCCCAGCCATGCGGCCTCGCTCCCGGAGCCTC 666
Query 25 AGTCCCGGACGATCCCCAGTATCCTTTGACAGTGAAATAATAATGATGAATCATGTTTACAAAGAAAGATTCCC 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGTCCCGGACGATCCCCAGTATCCTTTGACAGTGAAATAATAATGATGAATCATGTTTACAAAGAAAGATTCCC 740
Query 99 AAAG---------------------------------------------------------------------- 102
||||
Sbjct 741 AAAGGCCACCGCACAAATGGAAGAGCGACTAGCAGAGTTTATTTCCTCCAACACTCCAGACAGCGTGCTGCCCT 814
Query 103 -------------------------------------------------------------------------- 102
Sbjct 815 TGGCAGATGGAGCCCTGAGCTTTATTCATCATCAGGTGATTGAGATGGCCCGAGACTGCCTGGATAAATCTCGG 888
Query 103 ------------------------------------------------------------------GCTCATGA 110
||||||||
Sbjct 889 AGTGGCCTCATTACATCACAATACTTCTACGAACTTCAAGATAATTTGGAGAAACTTTTACAAGATGCTCATGA 962
Query 111 GCGCTCAGAGAGCTCAGAAGTGGCTTTTGTGATGCAGCTGGTGAAAAAGCTGATGATTATCATTGCCCGCCCAG 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GCGCTCAGAGAGCTCAGAAGTGGCTTTTGTGATGCAGCTGGTGAAAAAGCTGATGATTATCATTGCCCGCCCAG 1036
Query 185 CACGTCTCCTGGAATGCCTGGAGTTTGACCCTGAAGAGTTCTACCACCTTTTAGAAGCAGCTGAGGGCCACGCC 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CACGTCTCCTGGAATGCCTGGAGTTTGACCCTGAAGAGTTCTACCACCTTTTAGAAGCAGCTGAGGGCCACGCC 1110
Query 259 AAAGAGGGACAAGGGATTAAATGTGACATTCCCCGCTACATCGTTAGCCAGCTGGGCCTCACCCGGGATCCCCT 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AAAGAGGGACAAGGGATTAAATGTGACATTCCCCGCTACATCGTTAGCCAGCTGGGCCTCACCCGGGATCCCCT 1184
Query 333 AGAAGAAATGGCCCAGTTGAGCAGCTGTGACAGTCCTGACACTCCAGAGACAGATGATTCTATTGAGGGCCATG 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AGAAGAAATGGCCCAGTTGAGCAGCTGTGACAGTCCTGACACTCCAGAGACAGATGATTCTATTGAGGGCCATG 1258
Query 407 GGGCATCTCTGCCATCTAAAAAGACACCCTCTGAAGAGGACTTCGAGACCATTAAGCTCATCAGCAATGGCGCC 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GGGCATCTCTGCCATCTAAAAAGACACCCTCTGAAGAGGACTTCGAGACCATTAAGCTCATCAGCAATGGCGCC 1332
Query 481 TATGGGGCTGTATTTCTGGTGCGGCACAAGTCCACCCGGCAGCGCTTTGCCATGAAGAAGATCAACAAGCAGAA 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TATGGGGCTGTATTTCTGGTGCGGCACAAGTCCACCCGGCAGCGCTTTGCCATGAAGAAGATCAACAAGCAGAA 1406
Query 555 CCTGATCCTACGGAACCAGATCCAGCAGGCCTTCGTGGAGCGTGACATACTGACTTTCGCTGAGAACCCCTTTG 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CCTGATCCTACGGAACCAGATCCAGCAGGCCTTCGTGGAGCGTGACATACTGACTTTCGCTGAGAACCCCTTTG 1480
Query 629 TGGTCAGCATGTTCTGCTCCTTTGATACCAAGCGCCACTTGTGCATGGTGATGGAGTACGTTGAAGGGGGAGAC 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TGGTCAGCATGTTCTGCTCCTTTGATACCAAGCGCCACTTGTGCATGGTGATGGAGTACGTTGAAGGGGGAGAC 1554
Query 703 TGTGCCACTCTGCTGAAGAATATTGGGGCCCTGCCTGTGGACATGGTGCGTCTATACTTTGCGGAAACTGTGCT 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TGTGCCACTCTGCTGAAGAATATTGGGGCCCTGCCTGTGGACATGGTGCGTCTATACTTTGCGGAAACTGTGCT 1628
Query 777 GGCCCTGGAGTACTTACACAACTATGGCATCGTGCACCGTGACCTCAAGCCTGACAACCTCCTAATTACATCCA 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GGCCCTGGAGTACTTACACAACTATGGCATCGTGCACCGTGACCTCAAGCCTGACAACCTCCTAATTACATCCA 1702
Query 851 TGGGGCACATCAAGCTCACGGACTTTGGACTGTCCAAAATGGGCCTCATGAGTCTGACAACGAACTTGTATGAG 924
||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct 1703 TGGGGCACATCAAGCTCACGGACTTTGGACTGTCCAAAATTGGCCTCATGAGTCTGACAACGAACTTGTATGAG 1776
Query 925 GGTCATATTGAAAAGGATGCCCGGGAATTCCTGGACAAGCAGGTATGCGGGACCCCAGAATACATTGCGCCTGA 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GGTCATATTGAAAAGGATGCCCGGGAATTCCTGGACAAGCAGGTATGCGGGACCCCAGAATACATTGCGCCTGA 1850
Query 999 GGTGATCCTGCGCCAGGGCTATGGGAAGCCAGTGGACTGGTGGGCCATGGGCATTATCCTGTATGAGTTCCTGG 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GGTGATCCTGCGCCAGGGCTATGGGAAGCCAGTGGACTGGTGGGCCATGGGCATTATCCTGTATGAGTTCCTGG 1924
Query 1073 TGGGCTGCGTCCCTTTTTTTGGAGATACTCCGGAGGAGCTCTTTGGGCAGGTGATCAGTGATGAGATTGTGTGG 1146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 TGGGCTGCGTCCCTTTTTTTGGAGATACTCCGGAGGAGCTCTTTGGGCAGGTGATCAGTGATGAGATTGTGTGG 1998
Query 1147 CCTGAGGGTGATGAGGCACTGCCCCCAGACGCCCAGGACCTCACCTCCAAACTGCTCCACCAGAACCCTCTGGA 1220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CCTGAGGGTGATGAGGCACTGCCCCCAGACGCCCAGGACCTCACCTCCAAACTGCTCCACCAGAACCCTCTGGA 2072
Query 1221 GAGACTTGGCACAGGCAGTGCCTATGAGGTGAAGCAGCACCCATTCTTTACTGGTCTGGACTGGACAGGACTTC 1294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GAGACTTGGCACAGGCAGTGCCTATGAGGTGAAGCAGCACCCATTCTTTACTGGTCTGGACTGGACAGGACTTC 2146
Query 1295 TCCGCCAGAAGGCTGAATTTATTCCTCAGTTGGAGTCAGAGGATGATACTAGCTATTTTGACACCCGCTCAGAG 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TCCGCCAGAAGGCTGAATTTATTCCTCAGTTGGAGTCAGAGGATGATACTAGCTATTTTGACACCCGCTCAGAG 2220
Query 1369 CGATACCACCACATGGACTCGGAGGATGAGGAAGAAGTGAGTGAGGATGGCTGCCTTGAGATCCGCCAGTTCTC 1442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 CGATACCACCACATGGACTCGGAGGATGAGGAAGAAGTGAGTGAGGATGGCTGCCTTGAGATCCGCCAGTTCTC 2294
Query 1443 TTCCTGCTCTCCAAGGTTCAACAAGGTGTACAGCAGCATGGAGCGGCTCTCACTGCTCGAGGAGCGCCGGACAC 1516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 TTCCTGCTCTCCAAGGTTCAACAAGGTGTACAGCAGCATGGAGCGGCTCTCACTGCTCGAGGAGCGCCGGACAC 2368
Query 1517 CACCCCCGACCAAGCGCAGCCTGAGTGAGGAGAAGGAGGACCATTCAGATGGCCTGGCAGGGCTCAAAGGCCGA 1590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 CACCCCCGACCAAGCGCAGCCTGAGTGAGGAGAAGGAGGACCATTCAGATGGCCTGGCAGGGCTCAAAGGCCGA 2442
Query 1591 GACCGGAGCTGGGTGATTGGCTCCCCTGAGATATTACGGAAGCGGCTGTCGGTGTCTGAGTCGTCCCACACAGA 1664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 2443 GACCGGAGCTGGGTGATTGGCTCCCCTGAGATATTACGGAAGCGGCTGTCGGTGTCTGAGTCATCCCACACAGA 2516
Query 1665 GAGTGACTCAAGCCCTCCAATGACAGTGCGACGCCGCTGCTCAGGCCTCCTGGATGCGCCTCGGTTCCCGGAGG 1738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 GAGTGACTCAAGCCCTCCAATGACAGTGCGACGCCGCTGCTCAGGCCTCCTGGATGCGCCTCGGTTCCCGGAGG 2590
Query 1739 GCCCTGAGGAGGCCAGCAGCACCCTCAGGAGGCAACCACAGGAGGGTATATGGGTCCTGACACCCCCATCTGGA 1812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 GCCCTGAGGAGGCCAGCAGCACCCTCAGGAGGCAACCACAGGAGGGTATATGGGTCCTGACACCCCCATCTGGA 2664
Query 1813 GAGGGGGTATCTGGGCCTGTCACTGAACACTCAGGGGAGCAGCGGCCAAAGCTGGATGAGGAAGCTGTTGGCCG 1886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 GAGGGGGTATCTGGGCCTGTCACTGAACACTCAGGGGAGCAGCGGCCAAAGCTGGATGAGGAAGCTGTTGGCCG 2738
Query 1887 GAGCAGTGGTTCCAGTCCAGCTATGGAGACCCGAGGCCGTGGGACCTCACAGCTGGCTGAGGGAGCCACAGCCA 1960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 GAGCAGTGGTTCCAGTCCAGCTATGGAGACCCGAGGCCGTGGGACCTCACAGCTGGCTGAGGGAGCCACAGCCA 2812
Query 1961 AGGCCATCAGTGACCTGGCTGTGCGTAGGGCCCGCCACCGGCTGCTCTCTGGGGACTCAACAGAGAAGCGCACT 2034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 AGGCCATCAGTGACCTGGCTGTGCGTAGGGCCCGCCACCGGCTGCTCTCTGGGGACTCAACAGAGAAGCGCACT 2886
Query 2035 GCTCGCCCTGTCAACAAAGTGATCAAGTCCGCCTCAGCCACAGCCCTCTCACTCCTCATTCCTTCGGAACACCA 2108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 GCTCGCCCTGTCAACAAAGTGATCAAGTCCGCCTCAGCCACAGCCCTCTCACTCCTCATTCCTTCGGAACACCA 2960
Query 2109 CACCTGCTCCCCGTTGGCCAGCCCCATGTCCCCACATTCTCAGTCGTCCAACCCATCATCCCGGGACTCTTCTC 2182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 CACCTGCTCCCCGTTGGCCAGCCCCATGTCCCCACATTCTCAGTCGTCCAACCCATCATCCCGGGACTCTTCTC 3034
Query 2183 ----------------------------------------------------------------CAAGAAGTAT 2192
||||||||||
Sbjct 3035 CAAGCAGGGACTTCTTGCCAGCCCTTGGCAGCATGAGGCCTCCCATCATCATCCACCGAGCTGGCAAGAAGTAT 3108
Query 2193 GGCTTCACCCTGCGGGCCATTCGCGTCTACATGGGTGACTCCGATGTCTACACCGTGCACCATATGGTGTGGCA 2266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 GGCTTCACCCTGCGGGCCATTCGCGTCTACATGGGTGACTCCGATGTCTACACCGTGCACCATATGGTGTGGCA 3182
Query 2267 CGTGGAGGATGGAGGTCCGGCCAGTGAGGCAGGGCTTCGTCAAGGTGACCTCATCACCCATGTCAATGGGGAAC 2340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 CGTGGAGGATGGAGGTCCGGCCAGTGAGGCAGGGCTTCGTCAAGGTGACCTCATCACCCATGTCAATGGGGAAC 3256
Query 2341 CTGTGCATGGCCTGGTGCACACGGAGGTGGTGGAGC-------------------------------------- 2376
|||||||||||||||||||||||||||||||.||||
Sbjct 3257 CTGTGCATGGCCTGGTGCACACGGAGGTGGTAGAGCTGATCCTGAAGAGTGGAAACAAGGTGGCCATTTCAACA 3330
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3331 ACTCCCCTGGAGAACACATCCATTAAAGTGGGGCCAGCTCGGAAGGGCAGCTACAAGGCCAAGATGGCCCGAAG 3404
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3405 GAGCAAGAGGAGCCGCGGCAAGGATGGGCAAGAAAGCAGAAAAAGGAGCTCCCTGTTCCGCAAGATCACCAAGC 3478
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3479 AAGCATCCCTGCTCCACACCAGCCGCAGCCTTTCTTCCCTTAACCGCTCCTTGTCATCAGGGGAGAGTGGGCCA 3552
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3553 GGCTCTCCCACACACAGCCACAGCCTTTCCCCCCGATCTCCCACTCAAGGCTACCGGGTGACCCCCGATGCTGT 3626
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3627 GCATTCAGTGGGAGGGAATTCATCACAGAGCAGCTCCCCCAGCTCCAGCGTGCCCAGTTCCCCAGCCGGCTCTG 3700
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3701 GGCACACACGGCCCAGCTCCCTCCACGGTCTGGCACCCAAGCTCCAACGCCAGTACCGCTCTCCACGGCGCAAG 3774
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3775 TCAGCAGGCAGCATCCCACTGTCACCACTGGCCCACACCCCTTCTCCCCCACCCCCAACAGCTTCACCTCAGCG 3848
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3849 GTCCCCATCGCCCCTGTCTGGCCATGTAGCCCAGGCCTTTCCCACAAAGCTTCACTTGTCACCTCCCCTGGGCA 3922
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3923 GGCAACTCTCACGGCCCAAGAGTGCGGAGCCACCCCGTTCACCACTACTCAAGAGGGTGCAGTCGGCTGAGAAA 3996
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3997 CTGGCAGCAGCACTTGCCGCCTCTGAGAAGAAGCTAGCCACTTCTCGCAAGCACAGCCTTGACCTGCCCCACTC 4070
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4071 TGAACTAAAGAAGGAACTGCCGCCCAGGGAAGTGAGCCCTCTGGAGGTAGTTGGAGCCAGGAGTGTGCTGTCTG 4144
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4145 GCAAGGGGGCCCTGCCAGGGAAGGGGGTGCTGCAGCCTGCTCCCTCACGGGCCCTAGGCACCCTCCGGCAGGAC 4218
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4219 CGAGCCGAACGACGGGAGTCGCTGCAGAAGCAAGAAGCCATTCGTGAGGTGGACTCCTCAGAGGACGACACCGA 4292
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4293 GGAAGGGCCTGAGAACAGCCAGGGTGCACAGGAGCTGAGCTTGGCACCTCACCCAGAAGTGAGCCAGAGTGTGG 4366
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4367 CCCCTAAAGGAGCAGGAGAGAGTGGGGAAGAGGATCCTTTCCCGTCCAGAGACCCTAGGAGCCTGGGCCCAATG 4440
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4441 GTCCCAAGCCTATTGACAGGGATCACACTGGGGCCTCCCAGAATGGAAAGTCCCAGTGGTCCCCACAGGAGGCT 4514
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4515 CGGGAGCCCACAAGCCATTGAGGAGGCTGCCAGCTCCTCCTCAGCAGGCCCCAACCTAGGTCAGTCTGGAGCCA 4588
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4589 CAGACCCCATCCCTCCTGAAGGTTGCTGGAAGGCCCAGCACCTCCACACCCAGGCACTAACAGCACTTTCTCCC 4662
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4663 AGCACTTCGGGACTCACCCCCACCAGCAGTTGCTCTCCTCCCAGCTCCACCTCTGGGAAGCTGAGCATGTGGTC 4736
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4737 CTGGAAATCCCTTATTGAGGGCCCAGACAGGGCATCCCCAAGCAGAAAGGCAACCATGGCAGGTGGGCTAGCCA 4810
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4811 ACCTCCAGGATTTGGAAAACACAACTCCAGCCCAGCCTAAGAACCTGTCTCCCAGGGAGCAGGGGAAGACACAG 4884
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4885 CCACCTAGTGCCCCCAGACTGGCCCATCCATCTTATGAGGATCCCAGCCAGGGCTGGCTATGGGAGTCTGAGTG 4958
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4959 TGCACAAGCAGTGAAAGAGGATCCAGCCCTGAGCATCACCCAAGTGCCTGATGCCTCAGGTGACAGAAGGCAGG 5032
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 5033 ACGTTCCATGCCGAGGCTGCCCCCTCACCCAGAAGTCTGAGCCCAGCCTCAGGAGGGGCCAAGAACCAGGGGGC 5106
Query 2377 ------------------------------------------------------ 2376
Sbjct 5107 CATCAAAAGCATCGGGATTTGGCATTGGTTCCAGATGAGCTTTTAAAGCAAACA 5160
