Nucleotide Global Alignment
Description
- Query:
- TRCN0000488327
- Subject:
- XM_005270656.5
- Aligned Length:
- 5133
- Identities:
- 2373
- Gaps:
- 2757
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCTGCGGATTCAGTAAGGAGAATCTCTACCCTTTGCCGAGGAGCTGAAGTAAACCAGCACATGTTTTCACC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CACATCTGCTCCAGCCCTCTTCCTCACTAAAGTCCCATTTAGTGCTGATTGTGCTTTGGCTACTTCTCCTCTTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCATTTTCCTGAACCCACGAGCCCACAGCAGTCCTGGCACTCCTTGTTCCAGCCGCCCACTGCCGTGGAGTTGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGACAAGTAACCGCAAGAGCTTGATTGTGACCTCTAGCACATCACCTACACTACCACGGCCACACTCACCACT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCATGGCCACACAGGTAACAGTCCTTTGGACAGCCCCCGGAATTTCTCTCCAAATGCACCTGCTCACTTTTCTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTGTTCCTGCCCGTAGCCATAGCCACAGAGCTGACAGGACTGATGGGCGGCGCTGGTCTTTGGCCTCTTTGCCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCTTCAGGATATGGAACTAACACTCCTAGCTCCACTGTCTCATCATCATGCTCCTCACAGGAAAAGCTGCATCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTTGCCTTTCCAGCCTACAGCTGATGAGCTGCACTTTTTGACGAAGCATTTCAGCACAGAGAGCGTACCAGATG 592
Query 1 -----------------------ATGCGGCCTCGCTCCCGGAGCCTCAGTCCCGGACGATCCCCAGTATCCTTT 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGGAAGGACGGCAGTCCCCAGCCATGCGGCCTCGCTCCCGGAGCCTCAGTCCCGGACGATCCCCAGTATCCTTT 666
Query 52 GACAGTGAAATAATAATGATGAATCATGTTTACAAAGAAAGATTCCCAAAG----------------------- 102
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GACAGTGAAATAATAATGATGAATCATGTTTACAAAGAAAGATTCCCAAAGGCCACCGCACAAATGGAAGAGCG 740
Query 103 -------------------------------------------------------------------------- 102
Sbjct 741 ACTAGCAGAGTTTATTTCCTCCAACACTCCAGACAGCGTGCTGCCCTTGGCAGATGGAGCCCTGAGCTTTATTC 814
Query 103 -------------------------------------------------------------------------- 102
Sbjct 815 ATCATCAGGTGATTGAGATGGCCCGAGACTGCCTGGATAAATCTCGGAGTGGCCTCATTACATCACAATACTTC 888
Query 103 ---------------------------------------GCTCATGAGCGCTCAGAGAGCTCAGAAGTGGCTTT 137
|||||||||||||||||||||||||||||||||||
Sbjct 889 TACGAACTTCAAGATAATTTGGAGAAACTTTTACAAGATGCTCATGAGCGCTCAGAGAGCTCAGAAGTGGCTTT 962
Query 138 TGTGATGCAGCTGGTGAAAAAGCTGATGATTATCATTGCCCGCCCAGCACGTCTCCTGGAATGCCTGGAGTTTG 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGTGATGCAGCTGGTGAAAAAGCTGATGATTATCATTGCCCGCCCAGCACGTCTCCTGGAATGCCTGGAGTTTG 1036
Query 212 ACCCTGAAGAGTTCTACCACCTTTTAGAAGCAGCTGAGGGCCACGCCAAAGAGGGACAAGGGATTAAATGTGAC 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ACCCTGAAGAGTTCTACCACCTTTTAGAAGCAGCTGAGGGCCACGCCAAAGAGGGACAAGGGATTAAATGTGAC 1110
Query 286 ATTCCCCGCTACATCGTTAGCCAGCTGGGCCTCACCCGGGATCCCCTAGAAGAAATGGCCCAGTTGAGCAGCTG 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ATTCCCCGCTACATCGTTAGCCAGCTGGGCCTCACCCGGGATCCCCTAGAAGAAATGGCCCAGTTGAGCAGCTG 1184
Query 360 TGACAGTCCTGACACTCCAGAGACAGATGATTCTATTGAGGGCCATGGGGCATCTCTGCCATCTAAAAAGACAC 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TGACAGTCCTGACACTCCAGAGACAGATGATTCTATTGAGGGCCATGGGGCATCTCTGCCATCTAAAAAGACAC 1258
Query 434 CCTCTGAAGAGGACTTCGAGACCATTAAGCTCATCAGCAATGGCGCCTATGGGGCTGTATTTCTGGTGCGGCAC 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CCTCTGAAGAGGACTTCGAGACCATTAAGCTCATCAGCAATGGCGCCTATGGGGCTGTATTTCTGGTGCGGCAC 1332
Query 508 AAGTCCACCCGGCAGCGCTTTGCCATGAAGAAGATCAACAAGCAGAACCTGATCCTACGGAACCAGATCCAGCA 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AAGTCCACCCGGCAGCGCTTTGCCATGAAGAAGATCAACAAGCAGAACCTGATCCTACGGAACCAGATCCAGCA 1406
Query 582 GGCCTTCGTGGAGCGTGACATACTGACTTTCGCTGAGAACCCCTTTGTGGTCAGCATGTTCTGCTCCTTTGATA 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GGCCTTCGTGGAGCGTGACATACTGACTTTCGCTGAGAACCCCTTTGTGGTCAGCATGTTCTGCTCCTTTGATA 1480
Query 656 CCAAGCGCCACTTGTGCATGGTGATGGAGTACGTTGAAGGGGGAGACTGTGCCACTCTGCTGAAGAATATTGGG 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CCAAGCGCCACTTGTGCATGGTGATGGAGTACGTTGAAGGGGGAGACTGTGCCACTCTGCTGAAGAATATTGGG 1554
Query 730 GCCCTGCCTGTGGACATGGTGCGTCTATACTTTGCGGAAACTGTGCTGGCCCTGGAGTACTTACACAACTATGG 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GCCCTGCCTGTGGACATGGTGCGTCTATACTTTGCGGAAACTGTGCTGGCCCTGGAGTACTTACACAACTATGG 1628
Query 804 CATCGTGCACCGTGACCTCAAGCCTGACAACCTCCTAATTACATCCATGGGGCACATCAAGCTCACGGACTTTG 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CATCGTGCACCGTGACCTCAAGCCTGACAACCTCCTAATTACATCCATGGGGCACATCAAGCTCACGGACTTTG 1702
Query 878 GACTGTCCAAAATGGGCCTCATGAGTCTGACAACGAACTTGTATGAGGGTCATATTGAAAAGGATGCCCGGGAA 951
|||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GACTGTCCAAAATTGGCCTCATGAGTCTGACAACGAACTTGTATGAGGGTCATATTGAAAAGGATGCCCGGGAA 1776
Query 952 TTCCTGGACAAGCAGGTATGCGGGACCCCAGAATACATTGCGCCTGAGGTGATCCTGCGCCAGGGCTATGGGAA 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TTCCTGGACAAGCAGGTATGCGGGACCCCAGAATACATTGCGCCTGAGGTGATCCTGCGCCAGGGCTATGGGAA 1850
Query 1026 GCCAGTGGACTGGTGGGCCATGGGCATTATCCTGTATGAGTTCCTGGTGGGCTGCGTCCCTTTTTTTGGAGATA 1099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GCCAGTGGACTGGTGGGCCATGGGCATTATCCTGTATGAGTTCCTGGTGGGCTGCGTCCCTTTTTTTGGAGATA 1924
Query 1100 CTCCGGAGGAGCTCTTTGGGCAGGTGATCAGTGATGAGATTGTGTGGCCTGAGGGTGATGAGGCACTGCCCCCA 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CTCCGGAGGAGCTCTTTGGGCAGGTGATCAGTGATGAGATTGTGTGGCCTGAGGGTGATGAGGCACTGCCCCCA 1998
Query 1174 GACGCCCAGGACCTCACCTCCAAACTGCTCCACCAGAACCCTCTGGAGAGACTTGGCACAGGCAGTGCCTATGA 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GACGCCCAGGACCTCACCTCCAAACTGCTCCACCAGAACCCTCTGGAGAGACTTGGCACAGGCAGTGCCTATGA 2072
Query 1248 GGTGAAGCAGCACCCATTCTTTACTGGTCTGGACTGGACAGGACTTCTCCGCCAGAAGGCTGAATTTATTCCTC 1321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GGTGAAGCAGCACCCATTCTTTACTGGTCTGGACTGGACAGGACTTCTCCGCCAGAAGGCTGAATTTATTCCTC 2146
Query 1322 AGTTGGAGTCAGAGGATGATACTAGCTATTTTGACACCCGCTCAGAGCGATACCACCACATGGACTCGGAGGAT 1395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 AGTTGGAGTCAGAGGATGATACTAGCTATTTTGACACCCGCTCAGAGCGATACCACCACATGGACTCGGAGGAT 2220
Query 1396 GAGGAAGAAGTGAGTGAGGATGGCTGCCTTGAGATCCGCCAGTTCTCTTCCTGCTCTCCAAGGTTCAACAAGGT 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GAGGAAGAAGTGAGTGAGGATGGCTGCCTTGAGATCCGCCAGTTCTCTTCCTGCTCTCCAAGGTTCAACAAGGT 2294
Query 1470 GTACAGCAGCATGGAGCGGCTCTCACTGCTCGAGGAGCGCCGGACACCACCCCCGACCAAGCGCAGCCTGAGTG 1543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 GTACAGCAGCATGGAGCGGCTCTCACTGCTCGAGGAGCGCCGGACACCACCCCCGACCAAGCGCAGCCTGAGTG 2368
Query 1544 AGGAGAAGGAGGACCATTCAGATGGCCTGGCAGGGCTCAAAGGCCGAGACCGGAGCTGGGTGATTGGCTCCCCT 1617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 AGGAGAAGGAGGACCATTCAGATGGCCTGGCAGGGCTCAAAGGCCGAGACCGGAGCTGGGTGATTGGCTCCCCT 2442
Query 1618 GAGATATTACGGAAGCGGCTGTCGGTGTCTGAGTCGTCCCACACAGAGAGTGACTCAAGCCCTCCAATGACAGT 1691
|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 2443 GAGATATTACGGAAGCGGCTGTCGGTGTCTGAGTCATCCCACACAGAGAGTGACTCAAGCCCTCCAATGACAGT 2516
Query 1692 GCGACGCCGCTGCTCAGGCCTCCTGGATGCGCCTCGGTTCCCGGAGGGCCCTGAGGAGGCCAGCAGCACCCTCA 1765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 GCGACGCCGCTGCTCAGGCCTCCTGGATGCGCCTCGGTTCCCGGAGGGCCCTGAGGAGGCCAGCAGCACCCTCA 2590
Query 1766 GGAGGCAACCACAGGAGGGTATATGGGTCCTGACACCCCCATCTGGAGAGGGGGTATCTGGGCCTGTCACTGAA 1839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 GGAGGCAACCACAGGAGGGTATATGGGTCCTGACACCCCCATCTGGAGAGGGGGTATCTGGGCCTGTCACTGAA 2664
Query 1840 CACTCAGGGGAGCAGCGGCCAAAGCTGGATGAGGAAGCTGTTGGCCGGAGCAGTGGTTCCAGTCCAGCTATGGA 1913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 CACTCAGGGGAGCAGCGGCCAAAGCTGGATGAGGAAGCTGTTGGCCGGAGCAGTGGTTCCAGTCCAGCTATGGA 2738
Query 1914 GACCCGAGGCCGTGGGACCTCACAGCTGGCTGAGGGAGCCACAGCCAAGGCCATCAGTGACCTGGCTGTGCGTA 1987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 GACCCGAGGCCGTGGGACCTCACAGCTGGCTGAGGGAGCCACAGCCAAGGCCATCAGTGACCTGGCTGTGCGTA 2812
Query 1988 GGGCCCGCCACCGGCTGCTCTCTGGGGACTCAACAGAGAAGCGCACTGCTCGCCCTGTCAACAAAGTGATCAAG 2061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 GGGCCCGCCACCGGCTGCTCTCTGGGGACTCAACAGAGAAGCGCACTGCTCGCCCTGTCAACAAAGTGATCAAG 2886
Query 2062 TCCGCCTCAGCCACAGCCCTCTCACTCCTCATTCCTTCGGAACACCACACCTGCTCCCCGTTGGCCAGCCCCAT 2135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 TCCGCCTCAGCCACAGCCCTCTCACTCCTCATTCCTTCGGAACACCACACCTGCTCCCCGTTGGCCAGCCCCAT 2960
Query 2136 GTCCCCACATTCTCAGTCGTCCAACCCATCATCCCGGGACTCTTCTC--------------------------- 2182
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 GTCCCCACATTCTCAGTCGTCCAACCCATCATCCCGGGACTCTTCTCCAAGCAGGGACTTCTTGCCAGCCCTTG 3034
Query 2183 -------------------------------------CAAGAAGTATGGCTTCACCCTGCGGGCCATTCGCGTC 2219
|||||||||||||||||||||||||||||||||||||
Sbjct 3035 GCAGCATGAGGCCTCCCATCATCATCCACCGAGCTGGCAAGAAGTATGGCTTCACCCTGCGGGCCATTCGCGTC 3108
Query 2220 TACATGGGTGACTCCGATGTCTACACCGTGCACCATATGGTGTGGCACGTGGAGGATGGAGGTCCGGCCAGTGA 2293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 TACATGGGTGACTCCGATGTCTACACCGTGCACCATATGGTGTGGCACGTGGAGGATGGAGGTCCGGCCAGTGA 3182
Query 2294 GGCAGGGCTTCGTCAAGGTGACCTCATCACCCATGTCAATGGGGAACCTGTGCATGGCCTGGTGCACACGGAGG 2367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 GGCAGGGCTTCGTCAAGGTGACCTCATCACCCATGTCAATGGGGAACCTGTGCATGGCCTGGTGCACACGGAGG 3256
Query 2368 TGGTGGAGC----------------------------------------------------------------- 2376
||||.||||
Sbjct 3257 TGGTAGAGCTGATCCTGAAGAGTGGAAACAAGGTGGCCATTTCAACAACTCCCCTGGAGAACACATCCATTAAA 3330
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3331 GTGGGGCCAGCTCGGAAGGGCAGCTACAAGGCCAAGATGGCCCGAAGGAGCAAGAGGAGCCGCGGCAAGGATGG 3404
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3405 GCAAGAAAGCAGAAAAAGGAGCTCCCTGTTCCGCAAGATCACCAAGCAAGCATCCCTGCTCCACACCAGCCGCA 3478
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3479 GCCTTTCTTCCCTTAACCGCTCCTTGTCATCAGGGGAGAGTGGGCCAGGCTCTCCCACACACAGCCACAGCCTT 3552
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3553 TCCCCCCGATCTCCCACTCAAGGCTACCGGGTGACCCCCGATGCTGTGCATTCAGTGGGAGGGAATTCATCACA 3626
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3627 GAGCAGCTCCCCCAGCTCCAGCGTGCCCAGTTCCCCAGCCGGCTCTGGGCACACACGGCCCAGCTCCCTCCACG 3700
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3701 GTCTGGCACCCAAGCTCCAACGCCAGTACCGCTCTCCACGGCGCAAGTCAGCAGGCAGCATCCCACTGTCACCA 3774
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3775 CTGGCCCACACCCCTTCTCCCCCACCCCCAACAGCTTCACCTCAGCGGTCCCCATCGCCCCTGTCTGGCCATGT 3848
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3849 AGCCCAGGCCTTTCCCACAAAGCTTCACTTGTCACCTCCCCTGGGCAGGCAACTCTCACGGCCCAAGAGTGCGG 3922
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3923 AGCCACCCCGTTCACCACTACTCAAGAGGGTGCAGTCGGCTGAGAAACTGGCAGCAGCACTTGCCGCCTCTGAG 3996
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3997 AAGAAGCTAGCCACTTCTCGCAAGCACAGCCTTGACCTGCCCCACTCTGAACTAAAGAAGGAACTGCCGCCCAG 4070
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4071 GGAAGTGAGCCCTCTGGAGGTAGTTGGAGCCAGGAGTGTGCTGTCTGGCAAGGGGGCCCTGCCAGGGAAGGGGG 4144
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4145 TGCTGCAGCCTGCTCCCTCACGGGCCCTAGGCACCCTCCGGCAGGACCGAGCCGAACGACGGGAGTCGCTGCAG 4218
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4219 AAGCAAGAAGCCATTCGTGAGGTGGACTCCTCAGAGGACGACACCGAGGAAGGGCCTGAGAACAGCCAGGGTGC 4292
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4293 ACAGGAGCTGAGCTTGGCACCTCACCCAGAAGTGAGCCAGAGTGTGGCCCCTAAAGGAGCAGGAGAGAGTGGGG 4366
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4367 AAGAGGATCCTTTCCCGTCCAGAGACCCTAGGAGCCTGGGCCCAATGGTCCCAAGCCTATTGACAGGGATCACA 4440
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4441 CTGGGGCCTCCCAGAATGGAAAGTCCCAGTGGTCCCCACAGGAGGCTCGGGAGCCCACAAGCCATTGAGGAGGC 4514
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4515 TGCCAGCTCCTCCTCAGCAGGCCCCAACCTAGGTCAGTCTGGAGCCACAGACCCCATCCCTCCTGAAGGTTGCT 4588
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4589 GGAAGGCCCAGCACCTCCACACCCAGGCACTAACAGCACTTTCTCCCAGCACTTCGGGACTCACCCCCACCAGC 4662
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4663 AGTTGCTCTCCTCCCAGCTCCACCTCTGGGAAGCTGAGCATGTGGTCCTGGAAATCCCTTATTGAGGGCCCAGA 4736
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4737 CAGGGCATCCCCAAGCAGAAAGGCAACCATGGCAGGTGGGCTAGCCAACCTCCAGGATTTGGAAAACACAACTC 4810
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4811 CAGCCCAGCCTAAGAACCTGTCTCCCAGGGAGCAGGGGAAGACACAGCCACCTAGTGCCCCCAGACTGGCCCAT 4884
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4885 CCATCTTATGAGGATCCCAGCCAGGGCTGGCTATGGGAGTCTGAGTGTGCACAAGCAGTGAAAGAGGATCCAGC 4958
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4959 CCTGAGCATCACCCAAGTGCCTGATGCCTCAGGTGACAGAAGGCAGGACGTTCCATGCCGAGGCTGCCCCCTCA 5032
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 5033 CCCAGAAGTCTGAGCCCAGCCTCAGGAGGGGCCAAGAACCAGGGGGCCATCAAAAGCATCGGGATTTGGCATTG 5106
Query 2377 --------------------------- 2376
Sbjct 5107 GTTCCAGATGAGCTTTTAAAGCAAACA 5133
