Nucleotide Global Alignment
Description
- Query:
- TRCN0000488327
- Subject:
- XM_006502835.3
- Aligned Length:
- 4993
- Identities:
- 2105
- Gaps:
- 2639
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGATGATTCGAGTATTCTGAGAAGGAGAGGTTTACAGAAGGAATTGAGCCTTCCAAGGAGAGGCAGCTTTTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCGGACAAGTAACCGCAAGAGCTTGATTGTAACCTCCAGCACATCACCTACGCTACCAAGGCCACACTCCCCAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCATGGCCACACAGGTAACAGTCCCTTGGACAGCCCCCGGAATTTCTCTCCAAATGCTCCTGCTCACTTTTCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTCGTTCCTGCCCGTAGCCATGGCCACAGAACAGACAGGACTGATGGACGGCGCTGGTCTTTGGCCTCGTTGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTCTTCAGGCTATGGAACCAACACTCCTAGCTCTACAGTCTCTTCATCATGTTCCTCACAAGAAAAGCTTCATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGTTACCTTTCCAGCCAACAGCTGATGAACTACACTTTCTGACGAAGCATTTTAGCACAGAAAACGTACCAGAT 444
Query 1 ------------------------ATGCGGCCTCGCTCCCGGAGCCTCAGTCCCGGACGATCCCCAGTATCCTT 50
||||||||.||.|||||.|||||||||||.|||||.||||||||.|||||
Sbjct 445 GAGGAGGGACGTCGGTCCCCAGCCATGCGGCCCCGTTCCCGCAGCCTCAGTCCTGGACGGTCCCCAGTTTCCTT 518
Query 51 TGACAGTGAAATAATAATGATGAATCATGTTTACAAAGAAAGATTCCCAAAG---------------------- 102
||||||||||||||||||||||||||||||.|||||||||||||||||.|||
Sbjct 519 TGACAGTGAAATAATAATGATGAATCATGTGTACAAAGAAAGATTCCCCAAGGCCACTGCACAGATGGAAGAGC 592
Query 103 -------------------------------------------------------------------------- 102
Sbjct 593 GACTAGCTGACTTCATTTCCTCTAACACTCCAGATAGTGTGTTGCCCTTGGCAGATGGAGCACTAAGCTTTATT 666
Query 103 -------------------------------------------------------------------------- 102
Sbjct 667 CATCATCAGGTGATTGAGATGGCCCGAGACTGCCTGGATAAATCTCGGAGTGGCCTCATTACGTCACACTATTT 740
Query 103 ----------------------------------------GCTCATGAGCGCTCAGAGAGCTCAGAAGTGGCTT 136
|||||.||.||||||||.||||||||.||.||.|
Sbjct 741 CTATGAACTTCAAGAGAATTTGGAAAAGCTTCTGCAAGATGCTCACGAACGCTCAGAAAGCTCAGATGTAGCCT 814
Query 137 TTGTGATGCAGCTGGTGAAAAAGCTGATGATTATCATTGCCCGCCCAGCACGTCTCCTGGAATGCCTGGAGTTT 210
|||||||.||||||||.||||||.|||||||.||||||||.||||||||.||.|||||||||||||||||||||
Sbjct 815 TTGTGATACAGCTGGTAAAAAAGTTGATGATCATCATTGCTCGCCCAGCTCGCCTCCTGGAATGCCTGGAGTTT 888
Query 211 GACCCTGAAGAGTTCTACCACCTTTTAGAAGCAGCTGAGGGCCACGCCAAAGAGGGACAAGGGATTAAATGTGA 284
|||||||||||.||.||||||||.||||||||||||||.||.||.||||||||||||||.||.|||||||||||
Sbjct 889 GACCCTGAAGAATTTTACCACCTGTTAGAAGCAGCTGAAGGTCATGCCAAAGAGGGACATGGAATTAAATGTGA 962
Query 285 CATTCCCCGCTACATCGTTAGCCAGCTGGGCCTCACCCGGGATCCCCTAGAAGAAATGGCCCAGTTGAGCAGCT 358
|||||||||||||||||||||||||||||||||.||.|||||||||.|.||.||||||||||||||||||||||
Sbjct 963 CATTCCCCGCTACATCGTTAGCCAGCTGGGCCTAACTCGGGATCCCTTGGAGGAAATGGCCCAGTTGAGCAGCT 1036
Query 359 GTGACAGTCCTGACACTCCAGAGACAGATGATTCTATTGAGGGCCATGGGGCATCTCTGCCATCTAAAAAGACA 432
.|||||||||.||.||||||||||||||||||||..|||||||.|.|||||.|||||.|||||||.|.|||||.
Sbjct 1037 ATGACAGTCCAGATACTCCAGAGACAGATGATTCAGTTGAGGGTCGTGGGGTATCTCAGCCATCTCAGAAGACC 1110
Query 433 CCCTCTGAAGAGGACTTCGAGACCATTAAGCTCATCAGCAATGGCGCCTATGGGGCTGTATTTCTGGTGCGGCA 506
|||||||||||||||||.||.||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 1111 CCCTCTGAAGAGGACTTTGAAACCATTAAGCTCATCAGCAATGGCGCCTATGGGGCTGTCTTTCTGGTGCGGCA 1184
Query 507 CAAGTCCACCCGGCAGCGCTTTGCCATGAAGAAGATCAACAAGCAGAACCTGATCCTACGGAACCAGATCCAGC 580
|||||||||.||||||||||||||.|||||||||||.||.|||||.|||||.||||||||||||||||||||||
Sbjct 1185 CAAGTCCACGCGGCAGCGCTTTGCAATGAAGAAGATTAATAAGCAAAACCTAATCCTACGGAACCAGATCCAGC 1258
Query 581 AGGCCTTCGTGGAGCGTGACATACTGACTTTCGCTGAGAACCCCTTTGTGGTCAGCATGTTCTGCTCCTTTGAT 654
|.||.||.|||||.||.||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.
Sbjct 1259 AAGCATTTGTGGAACGCGACATACTGACTTTCGCTGAAAACCCCTTTGTGGTCAGCATGTTCTGCTCCTTTGAG 1332
Query 655 ACCAAGCGCCACTTGTGCATGGTGATGGAGTACGTTGAAGGGGGAGACTGTGCCACTCTGCTGAAGAATATTGG 728
||||||||.|||||.||||||||||||||.|||||.||||||||||||||||||||||||||.|||||.||.||
Sbjct 1333 ACCAAGCGTCACTTATGCATGGTGATGGAATACGTAGAAGGGGGAGACTGTGCCACTCTGCTCAAGAACATCGG 1406
Query 729 GGCCCTGCCTGTGGACATGGTGCGTCTATACTTTGCGGAAACTGTGCTGGCCCTGGAGTACTTACACAACTATG 802
||||||.||||||||||||||.||.||.|||||||||||||||||||||||..||||.||||||||||||||.|
Sbjct 1407 GGCCCTACCTGTGGACATGGTACGCCTGTACTTTGCGGAAACTGTGCTGGCTTTGGAATACTTACACAACTACG 1480
Query 803 GCATCGTGCACCGTGACCTCAAGCCTGACAACCTCCTAATTACATCCATGGGGCACATCAAGCTCACGGACTTT 876
||||||||||||||||||||||||||||||||||.||.||||||||||||||.||||||||.|||||.||||||
Sbjct 1481 GCATCGTGCACCGTGACCTCAAGCCTGACAACCTTCTGATTACATCCATGGGACACATCAAACTCACTGACTTT 1554
Query 877 GGACTGTCCAAAATGGGCCTCATGAGTCTGACAACGAACTTGTATGAGGGTCATATTGAAAAGGATGCCCGGGA 950
|||||.||.|||||.||||||||||||.|||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GGACTTTCTAAAATCGGCCTCATGAGTTTGACAACCAACTTGTATGAGGGTCATATTGAAAAGGATGCCCGGGA 1628
Query 951 ATTCCTGGACAAGCAGGTATGCGGGACCCCAGAATACATTGCGCCTGAGGTGATCCTGCGCCAGGGCTATGGGA 1024
.|||||.|||||||||||||||||||||||.||||||||.||.|||||||||||||||||.|||||.|||||||
Sbjct 1629 GTTCCTAGACAAGCAGGTATGCGGGACCCCGGAATACATAGCACCTGAGGTGATCCTGCGTCAGGGATATGGGA 1702
Query 1025 AGCCAGTGGACTGGTGGGCCATGGGCATTATCCTGTATGAGTTCCTGGTGGGCTGCGTCCCTTTTTTTGGAGAT 1098
||||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||.||||||||.
Sbjct 1703 AGCCAGTGGACTGGTGGGCCATGGGCATAATCCTGTATGAGTTCCTGGTGGGTTGCGTCCCTTTCTTTGGAGAC 1776
Query 1099 ACTCCGGAGGAGCTCTTTGGGCAGGTGATCAGTGATGAGATTGTGTGGCCTGAGGGTGATGAGGCACTGCCCCC 1172
|||||||||||||||||||||||.|||||||||||||||||.||||||||.||.||||||||.||.||.|||||
Sbjct 1777 ACTCCGGAGGAGCTCTTTGGGCAAGTGATCAGTGATGAGATCGTGTGGCCCGAAGGTGATGACGCGCTTCCCCC 1850
Query 1173 AGACGCCCAGGACCTCACCTCCAAACTGCTCCACCAGAACCCTCTGGAGAGACTTGGCACAGGCAGTGCCTATG 1246
|||.|||||.||||||||.|||||||||||.||.|||||.||.||.||.|||||.||||||.|.||||||||||
Sbjct 1851 AGATGCCCAAGACCTCACTTCCAAACTGCTTCATCAGAATCCACTAGAAAGACTGGGCACAAGTAGTGCCTATG 1924
Query 1247 AGGTGAAGCAGCACCCATTCTTTACTGGTCTGGACTGGACAGGACTTCTCCGCCAGAAGGCTGAATTTATTCCT 1320
|.||||||||||||||||||||.|..|||||||||||||||||||||||.||.|||||||||||||||||.|||
Sbjct 1925 AAGTGAAGCAGCACCCATTCTTCATGGGTCTGGACTGGACAGGACTTCTACGGCAGAAGGCTGAATTTATACCT 1998
Query 1321 CAGTTGGAGTCAGAGGATGATACTAGCTATTTTGACACCCGCTCAGAGCGATACCACCACATGGACTCGGAGGA 1394
|||.||||||||||||||||.||.|||||.|||||.|||||.|||||.|||||||||||..|||||||.|||||
Sbjct 1999 CAGCTGGAGTCAGAGGATGACACCAGCTACTTTGATACCCGTTCAGAACGATACCACCATGTGGACTCTGAGGA 2072
Query 1395 TGAGGAAGAAGTGAGTGAGGATGGCTGCCTTGAGATCCGCCAGTTCTCTTCCTGCTCTCCAAGGTTCAACAAGG 1468
||||||.|||||||||||||||||||||||||||||.||||||||.||||||||||||||||||||||.|||||
Sbjct 2073 TGAGGAGGAAGTGAGTGAGGATGGCTGCCTTGAGATTCGCCAGTTTTCTTCCTGCTCTCCAAGGTTCAGCAAGG 2146
Query 1469 TGTACAGCAGCATGGAGCGGCTCTCACTGCTCGAGGAGCGCCGGACACCACCCCCGACCAAGCGCAGCCTGAGT 1542
|.|||||.||||||||.|||||.||.|||||.|||||.||||||||||||||.||.||||||||||||||.|||
Sbjct 2147 TTTACAGTAGCATGGAACGGCTTTCCCTGCTTGAGGAACGCCGGACACCACCTCCAACCAAGCGCAGCCTCAGT 2220
Query 1543 GAGGAGAAGGAGGACCATTCAGATGGCCTGGCAGGGCTCAAAGGCCGAGACCGGAGCTGGGTGATTGGCTCCCC 1616
|||||.|||||.||.||.|||||.|||.|||||||.||.||.||||||||.||.||||||||||||||.|||||
Sbjct 2221 GAGGAAAAGGAAGATCACTCAGACGGCTTGGCAGGACTGAAGGGCCGAGATCGCAGCTGGGTGATTGGGTCCCC 2294
Query 1617 TGAGATATTACGGAAGCGGCTGTCGGTGTCTGAGTCGTCCCACACAGAGAGTGACTCAAGCCCTCCAATGACAG 1690
|||||||||||||||||||.|.||.|||||.|||||.|||||||||||||||||.||.||.|||||||||||||
Sbjct 2295 TGAGATATTACGGAAGCGGTTATCTGTGTCCGAGTCATCCCACACAGAGAGTGATTCGAGTCCTCCAATGACAG 2368
Query 1691 TGCGACGCCGCTGCTCAGGCCTCCTGGATGCGCCTCGGTTCCCGGAGGGCCCTGAGGAGGCCAGCAGCA-CCCT 1763
||||||..||.||.||||||||||..||||.||||| |..|||||||||||.|.||.|||| ||||
Sbjct 2369 TGCGACATCGGTGTTCAGGCCTCCCAGATGGGCCTC---------ATTGCCCTGAGGAGACTAGTAGCACCCCT 2433
Query 1764 CAGGAGGCAACCACAGGAGGGTATATGGGTCCTGACACCCCCATCTGGAGAGGGGGTATCTGGGCCTGTCACTG 1837
| |||.|||||.||||||.||||||||||||||.|..||||||||||||||||||..||||.|||||||..|||
Sbjct 2434 C-GGAAGCAACAACAGGAAGGTATATGGGTCCTCATTCCCCCATCTGGAGAGGGGTCATCTAGGCCTGTTCCTG 2506
Query 1838 AACACTCAGGGGA-----GCAGCGGCCA---AAGCTGGATGAGGAAGCTGTTGGCCGGAGCAGT-GGTTCCAGT 1902
||| || |.||.|||.| ||||||||||||||..||..|||||..|||||| ||| ||
Sbjct 2507 AAC--------GACCGTTGGAGAGGCAACTGAAGCTGGATGAGGAGCCTCCTGGCCAAAGCAGTCGGT----GT 2568
Query 1903 ---CCAGCTATGGAGACCCGAGGCCGTGGGACCTCACAGCTGGCTGAGGGAGCCACAGCCAAGGCCATCAGTGA 1973
|||||..|||||||.|||||||||||||||.|.|||||.|||||||.|||.||||||||.||||||||.||
Sbjct 2569 TGCCCAGCCCTGGAGACACGAGGCCGTGGGACCCCTCAGCTAGCTGAGGAAGCTACAGCCAAAGCCATCAGCGA 2642
Query 1974 CCTGGCTGTGCGTAGGGCCCGCCACCGGCTGCTCTCTGGGGACTCAACAGAGAAGCGCACTGCTCGCCCTGTCA 2047
|||.|||||||||||||||||.|||||||||||||||||||||||.|.||||||||||||..||||||||||||
Sbjct 2643 CCTAGCTGTGCGTAGGGCCCGTCACCGGCTGCTCTCTGGGGACTCTATAGAGAAGCGCACCACTCGCCCTGTCA 2716
Query 2048 ACAAAGTGATCAAGTCCGCCTCAGCCACAGCCCTCTCACTCCTCATTCCTTCGGAACACCACACCTGCTCCCCG 2121
|||||||.||||||||.||||||||.||.|||||.||.||||||||||||||.||||||||..|||||||.||.
Sbjct 2717 ACAAAGTAATCAAGTCAGCCTCAGCTACGGCCCTTTCCCTCCTCATTCCTTCAGAACACCATGCCTGCTCACCA 2790
Query 2122 TTGGCCAGCCCCATGTCCCCACATTCTCAGTCGTCCAACCCATCATCCCGGGACTCTTCTC------------- 2182
|||||||||||.||||||||||||||.|||||.|||||.|||||||||.||||||||||||
Sbjct 2791 TTGGCCAGCCCTATGTCCCCACATTCCCAGTCATCCAATCCATCATCCAGGGACTCTTCTCCAAGCAGGGACTT 2864
Query 2183 ---------------------------------------------------CAAGAAGTATGGCTTCACCCTGC 2205
|||||||||||||||||||||||
Sbjct 2865 CTTGCCAGCCCTTGGCAGCTTGAGGCCTCCCATCATCATCCACCGAGCTGGCAAGAAGTATGGCTTCACCCTGC 2938
Query 2206 GGGCCATTCGCGTCTACATGGGTGACTCCGATGTCTACACCGTGCACCATATGGTGTGGCACGTGGAGGATGGA 2279
||||||||||.|||||||||||||||.|.||||||||||||||.|||||.|||||||||||.|||||||||||.
Sbjct 2939 GGGCCATTCGAGTCTACATGGGTGACACTGATGTCTACACCGTACACCACATGGTGTGGCATGTGGAGGATGGT 3012
Query 2280 GGTCCGGCCAGTGAGGCAGGGCTTCGTCAAGGTGACCTCATCACCCATGTCAATGGGGAACCTGTGCATGGCCT 2353
|||||.||||||||.||||||||||||||.||||||||||||||||||||||||||.||.|||||||||||.||
Sbjct 3013 GGTCCAGCCAGTGAAGCAGGGCTTCGTCAGGGTGACCTCATCACCCATGTCAATGGTGAGCCTGTGCATGGGCT 3086
Query 2354 GGTGCACACGGAGGTGGTGGAGC--------------------------------------------------- 2376
.||.|||||.||.||||||||||
Sbjct 3087 AGTCCACACAGAAGTGGTGGAGCTGGTTCTGAAGAGTGGAAACAAGGTATCAATTTCAACAACTCCCTTGGAGA 3160
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3161 ACACGTCAATCAAAGTGGGGCCAGCTAGGAAAGGCAGCTATAAAGCCAAGATGGCCCGAAGGAGCAAACGGAGC 3234
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3235 AAAGGCAAGGATGGGCAAGAAAGCCGAAAAAGAAGCTCCCTATTCCGGAAAATCACAAAGCAGGCCTCCTTGCT 3308
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3309 CCACACCAGCCGCAGCCTTTCTTCCCTTAACCGCTCCTTGTCATCAGGGGAGAGTGGTCCAGGCTCTCCCACAC 3382
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3383 ACAGCCACAGCCTCTCTCCCAGATCTCCTCCTCAGGGATACCGGGTAGCCCCAGATGCTGTGCACTCAGTAGGA 3456
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3457 GGGAATTCCTCGCAGAGCAGCTCTCCCAGCTCCAGTGTGCCCAGTTCTCCTGCTGGCTCTGGACATACACGGCC 3530
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3531 CAGCTCTCTTCACGGTCTGGCACCCAAGCTCCAACGCCAATACCGCTCACCACGGCGCAAGTCAGCAGGCAGCA 3604
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3605 TCCCACTGTCACCGTTGGCCCACACCCCTTCCCCACCAGCAACGGCAGCTTCACCTCAGCGTTCCCCATCACCC 3678
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3679 TTGTCTGGCCATGGGTCTCAGTCCTTTCCTACCAAACTTCACTTGTCTCCTCCGCTAGGTAGGCAGCTCTCACG 3752
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3753 GCCCAAGAGTGCAGAGCCACCCCGCTCTCCCCTACTTAAGAGGGTGCAGTCTGCTGAGAAGCTGGCGGCTGCAC 3826
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3827 TGGCAGCTGCTGAGAAGAAGTTAGCACCTTCCCGCAAACATAGTCTTGACCTGCCCCATGGTGAACTAAAGAAG 3900
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3901 GAACTGACACCCAGGGAAGCCAGCCCTCTGGAGGTAGTTGGAACCAGAAGTGTGCTATCCGGGAAAGGGCCACT 3974
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3975 TCCAGGAAAGGGGGTACTGCAGCCTGCTCCTTCACGGGCCCTTGGGACCCTACGGCAGGATCGAGCTGAACGCC 4048
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4049 GTGAGTCACTGCAAAAACAAGAAGCAATCCGGGAAGTAGACTCCTCAGAAGATGACACTGATGAGGAGCCTGAG 4122
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4123 AACAGCCAGGCCACACAGGAGCCAAGATTGTCCCCCCACCCAGAAGCAAGCCACAATCTACTCCCTAAAGGTTC 4196
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4197 AGGAGAGGGTACAGAAGAGGACACTTTCTTGCACAGGGATCTAAAGAAGCAGGGCCCTGTACTCTCAGGTCTAG 4270
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4271 TGACAGGGGCCACACTAGGCTCCCCCCGAGTAGACGTTCCTGGGCTCTCCCCAAGGAAGCTCAGCAGGCCACAA 4344
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4345 GCCTTTGAGGAAGCTACCAACCCCTTACAAGTCCCTAGCCTGAGCAGGTCTGGACCCACAAGCCCCACCCCCTC 4418
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4419 TGAAGGCTGCTGGAAGGCCCAGCACCTCCACACACAGGCACTAACTGCACTTTGTCCCAGCTTTTCAGAACTTA 4492
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4493 CCCCTACCGGTTGTTCTGCTGCCACCTCCACCTCTGGAAAGCCAGGGACATGGTCCTGGAAATTCCTTATTGAG 4566
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4567 GGTCCAGACAGAGCATCCACGAACAAGACCATAACAAGGAAAGGTGAACCAGCTAACTCCCAAGATACGAATAC 4640
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4641 CACGGTCCCAAATCTTCTGAAGAACCTGTCTCCTGAGGAGGAGAAGCCACAGCCACCAAGTGTGCCTGGGCTGA 4714
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4715 CCCATCCGCTTCTTGAGGTCCCCAGCCAGAACTGGCCATGGGAGTCTGAATGTGAACAAATGGAGAAAGAAGAA 4788
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4789 CCATCCCTGAGCATCACCGAAGTGCCTGATTCCTCAGGCGACAGGAGGCAGGACATTCCATGCAGAGCCCACCC 4862
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4863 CCTGAGCCCAGAAACCCGGCCCAGCCTGCTCTGGAAAAGCCAAGAACTTGGGGGCCAGCAAGATCATCAGGACT 4936
Query 2377 ----------------------------------- 2376
Sbjct 4937 TAGCACTGACATCAGATGAGCTCTTAAAGCAAACC 4971
