Nucleotide Global Alignment
Description
- Query:
- TRCN0000488327
- Subject:
- XM_006502836.3
- Aligned Length:
- 4972
- Identities:
- 2105
- Gaps:
- 2618
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGATGATTCGAGTATTCTGAGAAGGAGAGGTTTACAGAAGGAATTGAGCCTTCCAAGGAGAGGCAGCTTTTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCGGACAAGTAACCGCAAGAGCTTGATTGTAACCTCCAGCACATCACCTACGCTACCAAGGCCACACTCCCCAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCATGGCCACACAGGTAACAGTCCCTTGGACAGCCCCCGGAATTTCTCTCCAAATGCTCCTGCTCACTTTTCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTCGTTCCTGCCCGTAGGACTGATGGACGGCGCTGGTCTTTGGCCTCGTTGCCTTCTTCAGGCTATGGAACCAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CACTCCTAGCTCTACAGTCTCTTCATCATGTTCCTCACAAGAAAAGCTTCATCAGTTACCTTTCCAGCCAACAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGATGAACTACACTTTCTGACGAAGCATTTTAGCACAGAAAACGTACCAGATGAGGAGGGACGTCGGTCCCCA 444
Query 1 ---ATGCGGCCTCGCTCCCGGAGCCTCAGTCCCGGACGATCCCCAGTATCCTTTGACAGTGAAATAATAATGAT 71
||||||||.||.|||||.|||||||||||.|||||.||||||||.||||||||||||||||||||||||||
Sbjct 445 GCCATGCGGCCCCGTTCCCGCAGCCTCAGTCCTGGACGGTCCCCAGTTTCCTTTGACAGTGAAATAATAATGAT 518
Query 72 GAATCATGTTTACAAAGAAAGATTCCCAAAG------------------------------------------- 102
|||||||||.|||||||||||||||||.|||
Sbjct 519 GAATCATGTGTACAAAGAAAGATTCCCCAAGGCCACTGCACAGATGGAAGAGCGACTAGCTGACTTCATTTCCT 592
Query 103 -------------------------------------------------------------------------- 102
Sbjct 593 CTAACACTCCAGATAGTGTGTTGCCCTTGGCAGATGGAGCACTAAGCTTTATTCATCATCAGGTGATTGAGATG 666
Query 103 -------------------------------------------------------------------------- 102
Sbjct 667 GCCCGAGACTGCCTGGATAAATCTCGGAGTGGCCTCATTACGTCACACTATTTCTATGAACTTCAAGAGAATTT 740
Query 103 -------------------GCTCATGAGCGCTCAGAGAGCTCAGAAGTGGCTTTTGTGATGCAGCTGGTGAAAA 157
|||||.||.||||||||.||||||||.||.||.||||||||.||||||||.||||
Sbjct 741 GGAAAAGCTTCTGCAAGATGCTCACGAACGCTCAGAAAGCTCAGATGTAGCCTTTGTGATACAGCTGGTAAAAA 814
Query 158 AGCTGATGATTATCATTGCCCGCCCAGCACGTCTCCTGGAATGCCTGGAGTTTGACCCTGAAGAGTTCTACCAC 231
||.|||||||.||||||||.||||||||.||.||||||||||||||||||||||||||||||||.||.||||||
Sbjct 815 AGTTGATGATCATCATTGCTCGCCCAGCTCGCCTCCTGGAATGCCTGGAGTTTGACCCTGAAGAATTTTACCAC 888
Query 232 CTTTTAGAAGCAGCTGAGGGCCACGCCAAAGAGGGACAAGGGATTAAATGTGACATTCCCCGCTACATCGTTAG 305
||.||||||||||||||.||.||.||||||||||||||.||.||||||||||||||||||||||||||||||||
Sbjct 889 CTGTTAGAAGCAGCTGAAGGTCATGCCAAAGAGGGACATGGAATTAAATGTGACATTCCCCGCTACATCGTTAG 962
Query 306 CCAGCTGGGCCTCACCCGGGATCCCCTAGAAGAAATGGCCCAGTTGAGCAGCTGTGACAGTCCTGACACTCCAG 379
||||||||||||.||.|||||||||.|.||.||||||||||||||||||||||.|||||||||.||.|||||||
Sbjct 963 CCAGCTGGGCCTAACTCGGGATCCCTTGGAGGAAATGGCCCAGTTGAGCAGCTATGACAGTCCAGATACTCCAG 1036
Query 380 AGACAGATGATTCTATTGAGGGCCATGGGGCATCTCTGCCATCTAAAAAGACACCCTCTGAAGAGGACTTCGAG 453
|||||||||||||..|||||||.|.|||||.|||||.|||||||.|.|||||.|||||||||||||||||.||.
Sbjct 1037 AGACAGATGATTCAGTTGAGGGTCGTGGGGTATCTCAGCCATCTCAGAAGACCCCCTCTGAAGAGGACTTTGAA 1110
Query 454 ACCATTAAGCTCATCAGCAATGGCGCCTATGGGGCTGTATTTCTGGTGCGGCACAAGTCCACCCGGCAGCGCTT 527
||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||
Sbjct 1111 ACCATTAAGCTCATCAGCAATGGCGCCTATGGGGCTGTCTTTCTGGTGCGGCACAAGTCCACGCGGCAGCGCTT 1184
Query 528 TGCCATGAAGAAGATCAACAAGCAGAACCTGATCCTACGGAACCAGATCCAGCAGGCCTTCGTGGAGCGTGACA 601
|||.|||||||||||.||.|||||.|||||.|||||||||||||||||||||||.||.||.|||||.||.||||
Sbjct 1185 TGCAATGAAGAAGATTAATAAGCAAAACCTAATCCTACGGAACCAGATCCAGCAAGCATTTGTGGAACGCGACA 1258
Query 602 TACTGACTTTCGCTGAGAACCCCTTTGTGGTCAGCATGTTCTGCTCCTTTGATACCAAGCGCCACTTGTGCATG 675
||||||||||||||||.|||||||||||||||||||||||||||||||||||.||||||||.|||||.||||||
Sbjct 1259 TACTGACTTTCGCTGAAAACCCCTTTGTGGTCAGCATGTTCTGCTCCTTTGAGACCAAGCGTCACTTATGCATG 1332
Query 676 GTGATGGAGTACGTTGAAGGGGGAGACTGTGCCACTCTGCTGAAGAATATTGGGGCCCTGCCTGTGGACATGGT 749
||||||||.|||||.||||||||||||||||||||||||||.|||||.||.||||||||.||||||||||||||
Sbjct 1333 GTGATGGAATACGTAGAAGGGGGAGACTGTGCCACTCTGCTCAAGAACATCGGGGCCCTACCTGTGGACATGGT 1406
Query 750 GCGTCTATACTTTGCGGAAACTGTGCTGGCCCTGGAGTACTTACACAACTATGGCATCGTGCACCGTGACCTCA 823
.||.||.|||||||||||||||||||||||..||||.||||||||||||||.||||||||||||||||||||||
Sbjct 1407 ACGCCTGTACTTTGCGGAAACTGTGCTGGCTTTGGAATACTTACACAACTACGGCATCGTGCACCGTGACCTCA 1480
Query 824 AGCCTGACAACCTCCTAATTACATCCATGGGGCACATCAAGCTCACGGACTTTGGACTGTCCAAAATGGGCCTC 897
|||||||||||||.||.||||||||||||||.||||||||.|||||.|||||||||||.||.|||||.||||||
Sbjct 1481 AGCCTGACAACCTTCTGATTACATCCATGGGACACATCAAACTCACTGACTTTGGACTTTCTAAAATCGGCCTC 1554
Query 898 ATGAGTCTGACAACGAACTTGTATGAGGGTCATATTGAAAAGGATGCCCGGGAATTCCTGGACAAGCAGGTATG 971
||||||.|||||||.||||||||||||||||||||||||||||||||||||||.|||||.||||||||||||||
Sbjct 1555 ATGAGTTTGACAACCAACTTGTATGAGGGTCATATTGAAAAGGATGCCCGGGAGTTCCTAGACAAGCAGGTATG 1628
Query 972 CGGGACCCCAGAATACATTGCGCCTGAGGTGATCCTGCGCCAGGGCTATGGGAAGCCAGTGGACTGGTGGGCCA 1045
|||||||||.||||||||.||.|||||||||||||||||.|||||.||||||||||||||||||||||||||||
Sbjct 1629 CGGGACCCCGGAATACATAGCACCTGAGGTGATCCTGCGTCAGGGATATGGGAAGCCAGTGGACTGGTGGGCCA 1702
Query 1046 TGGGCATTATCCTGTATGAGTTCCTGGTGGGCTGCGTCCCTTTTTTTGGAGATACTCCGGAGGAGCTCTTTGGG 1119
|||||||.|||||||||||||||||||||||.|||||||||||.||||||||.|||||||||||||||||||||
Sbjct 1703 TGGGCATAATCCTGTATGAGTTCCTGGTGGGTTGCGTCCCTTTCTTTGGAGACACTCCGGAGGAGCTCTTTGGG 1776
Query 1120 CAGGTGATCAGTGATGAGATTGTGTGGCCTGAGGGTGATGAGGCACTGCCCCCAGACGCCCAGGACCTCACCTC 1193
||.|||||||||||||||||.||||||||.||.||||||||.||.||.||||||||.|||||.||||||||.||
Sbjct 1777 CAAGTGATCAGTGATGAGATCGTGTGGCCCGAAGGTGATGACGCGCTTCCCCCAGATGCCCAAGACCTCACTTC 1850
Query 1194 CAAACTGCTCCACCAGAACCCTCTGGAGAGACTTGGCACAGGCAGTGCCTATGAGGTGAAGCAGCACCCATTCT 1267
|||||||||.||.|||||.||.||.||.|||||.||||||.|.|||||||||||.|||||||||||||||||||
Sbjct 1851 CAAACTGCTTCATCAGAATCCACTAGAAAGACTGGGCACAAGTAGTGCCTATGAAGTGAAGCAGCACCCATTCT 1924
Query 1268 TTACTGGTCTGGACTGGACAGGACTTCTCCGCCAGAAGGCTGAATTTATTCCTCAGTTGGAGTCAGAGGATGAT 1341
|.|..|||||||||||||||||||||||.||.|||||||||||||||||.||||||.||||||||||||||||.
Sbjct 1925 TCATGGGTCTGGACTGGACAGGACTTCTACGGCAGAAGGCTGAATTTATACCTCAGCTGGAGTCAGAGGATGAC 1998
Query 1342 ACTAGCTATTTTGACACCCGCTCAGAGCGATACCACCACATGGACTCGGAGGATGAGGAAGAAGTGAGTGAGGA 1415
||.|||||.|||||.|||||.|||||.|||||||||||..|||||||.|||||||||||.||||||||||||||
Sbjct 1999 ACCAGCTACTTTGATACCCGTTCAGAACGATACCACCATGTGGACTCTGAGGATGAGGAGGAAGTGAGTGAGGA 2072
Query 1416 TGGCTGCCTTGAGATCCGCCAGTTCTCTTCCTGCTCTCCAAGGTTCAACAAGGTGTACAGCAGCATGGAGCGGC 1489
|||||||||||||||.||||||||.||||||||||||||||||||||.||||||.|||||.||||||||.||||
Sbjct 2073 TGGCTGCCTTGAGATTCGCCAGTTTTCTTCCTGCTCTCCAAGGTTCAGCAAGGTTTACAGTAGCATGGAACGGC 2146
Query 1490 TCTCACTGCTCGAGGAGCGCCGGACACCACCCCCGACCAAGCGCAGCCTGAGTGAGGAGAAGGAGGACCATTCA 1563
|.||.|||||.|||||.||||||||||||||.||.||||||||||||||.||||||||.|||||.||.||.|||
Sbjct 2147 TTTCCCTGCTTGAGGAACGCCGGACACCACCTCCAACCAAGCGCAGCCTCAGTGAGGAAAAGGAAGATCACTCA 2220
Query 1564 GATGGCCTGGCAGGGCTCAAAGGCCGAGACCGGAGCTGGGTGATTGGCTCCCCTGAGATATTACGGAAGCGGCT 1637
||.|||.|||||||.||.||.||||||||.||.||||||||||||||.||||||||||||||||||||||||.|
Sbjct 2221 GACGGCTTGGCAGGACTGAAGGGCCGAGATCGCAGCTGGGTGATTGGGTCCCCTGAGATATTACGGAAGCGGTT 2294
Query 1638 GTCGGTGTCTGAGTCGTCCCACACAGAGAGTGACTCAAGCCCTCCAATGACAGTGCGACGCCGCTGCTCAGGCC 1711
.||.|||||.|||||.|||||||||||||||||.||.||.|||||||||||||||||||..||.||.|||||||
Sbjct 2295 ATCTGTGTCCGAGTCATCCCACACAGAGAGTGATTCGAGTCCTCCAATGACAGTGCGACATCGGTGTTCAGGCC 2368
Query 1712 TCCTGGATGCGCCTCGGTTCCCGGAGGGCCCTGAGGAGGCCAGCAGCA-CCCTCAGGAGGCAACCACAGGAGGG 1784
|||..||||.||||| |..|||||||||||.|.||.|||| ||||| |||.|||||.||||||.||
Sbjct 2369 TCCCAGATGGGCCTC---------ATTGCCCTGAGGAGACTAGTAGCACCCCTC-GGAAGCAACAACAGGAAGG 2432
Query 1785 TATATGGGTCCTGACACCCCCATCTGGAGAGGGGGTATCTGGGCCTGTCACTGAACACTCAGGGGA-----GCA 1853
||||||||||||.|..||||||||||||||||||..||||.|||||||..|||||| || |.|
Sbjct 2433 TATATGGGTCCTCATTCCCCCATCTGGAGAGGGGTCATCTAGGCCTGTTCCTGAAC--------GACCGTTGGA 2498
Query 1854 GCGGCCA---AAGCTGGATGAGGAAGCTGTTGGCCGGAGCAGT-GGTTCCAGT---CCAGCTATGGAGACCCGA 1920
|.|||.| ||||||||||||||..||..|||||..|||||| ||| || |||||..|||||||.|||
Sbjct 2499 GAGGCAACTGAAGCTGGATGAGGAGCCTCCTGGCCAAAGCAGTCGGT----GTTGCCCAGCCCTGGAGACACGA 2568
Query 1921 GGCCGTGGGACCTCACAGCTGGCTGAGGGAGCCACAGCCAAGGCCATCAGTGACCTGGCTGTGCGTAGGGCCCG 1994
||||||||||||.|.|||||.|||||||.|||.||||||||.||||||||.|||||.|||||||||||||||||
Sbjct 2569 GGCCGTGGGACCCCTCAGCTAGCTGAGGAAGCTACAGCCAAAGCCATCAGCGACCTAGCTGTGCGTAGGGCCCG 2642
Query 1995 CCACCGGCTGCTCTCTGGGGACTCAACAGAGAAGCGCACTGCTCGCCCTGTCAACAAAGTGATCAAGTCCGCCT 2068
.|||||||||||||||||||||||.|.||||||||||||..|||||||||||||||||||.||||||||.||||
Sbjct 2643 TCACCGGCTGCTCTCTGGGGACTCTATAGAGAAGCGCACCACTCGCCCTGTCAACAAAGTAATCAAGTCAGCCT 2716
Query 2069 CAGCCACAGCCCTCTCACTCCTCATTCCTTCGGAACACCACACCTGCTCCCCGTTGGCCAGCCCCATGTCCCCA 2142
||||.||.|||||.||.||||||||||||||.||||||||..|||||||.||.|||||||||||.|||||||||
Sbjct 2717 CAGCTACGGCCCTTTCCCTCCTCATTCCTTCAGAACACCATGCCTGCTCACCATTGGCCAGCCCTATGTCCCCA 2790
Query 2143 CATTCTCAGTCGTCCAACCCATCATCCCGGGACTCTTCTC---------------------------------- 2182
|||||.|||||.|||||.|||||||||.||||||||||||
Sbjct 2791 CATTCCCAGTCATCCAATCCATCATCCAGGGACTCTTCTCCAAGCAGGGACTTCTTGCCAGCCCTTGGCAGCTT 2864
Query 2183 ------------------------------CAAGAAGTATGGCTTCACCCTGCGGGCCATTCGCGTCTACATGG 2226
|||||||||||||||||||||||||||||||||.||||||||||
Sbjct 2865 GAGGCCTCCCATCATCATCCACCGAGCTGGCAAGAAGTATGGCTTCACCCTGCGGGCCATTCGAGTCTACATGG 2938
Query 2227 GTGACTCCGATGTCTACACCGTGCACCATATGGTGTGGCACGTGGAGGATGGAGGTCCGGCCAGTGAGGCAGGG 2300
|||||.|.||||||||||||||.|||||.|||||||||||.|||||||||||.|||||.||||||||.||||||
Sbjct 2939 GTGACACTGATGTCTACACCGTACACCACATGGTGTGGCATGTGGAGGATGGTGGTCCAGCCAGTGAAGCAGGG 3012
Query 2301 CTTCGTCAAGGTGACCTCATCACCCATGTCAATGGGGAACCTGTGCATGGCCTGGTGCACACGGAGGTGGTGGA 2374
||||||||.||||||||||||||||||||||||||.||.|||||||||||.||.||.|||||.||.||||||||
Sbjct 3013 CTTCGTCAGGGTGACCTCATCACCCATGTCAATGGTGAGCCTGTGCATGGGCTAGTCCACACAGAAGTGGTGGA 3086
Query 2375 GC------------------------------------------------------------------------ 2376
||
Sbjct 3087 GCTGGTTCTGAAGAGTGGAAACAAGGTATCAATTTCAACAACTCCCTTGGAGAACACGTCAATCAAAGTGGGGC 3160
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3161 CAGCTAGGAAAGGCAGCTATAAAGCCAAGATGGCCCGAAGGAGCAAACGGAGCAAAGGCAAGGATGGGCAAGAA 3234
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3235 AGCCGAAAAAGAAGCTCCCTATTCCGGAAAATCACAAAGCAGGCCTCCTTGCTCCACACCAGCCGCAGCCTTTC 3308
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3309 TTCCCTTAACCGCTCCTTGTCATCAGGGGAGAGTGGTCCAGGCTCTCCCACACACAGCCACAGCCTCTCTCCCA 3382
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3383 GATCTCCTCCTCAGGGATACCGGGTAGCCCCAGATGCTGTGCACTCAGTAGGAGGGAATTCCTCGCAGAGCAGC 3456
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3457 TCTCCCAGCTCCAGTGTGCCCAGTTCTCCTGCTGGCTCTGGACATACACGGCCCAGCTCTCTTCACGGTCTGGC 3530
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3531 ACCCAAGCTCCAACGCCAATACCGCTCACCACGGCGCAAGTCAGCAGGCAGCATCCCACTGTCACCGTTGGCCC 3604
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3605 ACACCCCTTCCCCACCAGCAACGGCAGCTTCACCTCAGCGTTCCCCATCACCCTTGTCTGGCCATGGGTCTCAG 3678
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3679 TCCTTTCCTACCAAACTTCACTTGTCTCCTCCGCTAGGTAGGCAGCTCTCACGGCCCAAGAGTGCAGAGCCACC 3752
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3753 CCGCTCTCCCCTACTTAAGAGGGTGCAGTCTGCTGAGAAGCTGGCGGCTGCACTGGCAGCTGCTGAGAAGAAGT 3826
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3827 TAGCACCTTCCCGCAAACATAGTCTTGACCTGCCCCATGGTGAACTAAAGAAGGAACTGACACCCAGGGAAGCC 3900
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3901 AGCCCTCTGGAGGTAGTTGGAACCAGAAGTGTGCTATCCGGGAAAGGGCCACTTCCAGGAAAGGGGGTACTGCA 3974
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3975 GCCTGCTCCTTCACGGGCCCTTGGGACCCTACGGCAGGATCGAGCTGAACGCCGTGAGTCACTGCAAAAACAAG 4048
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4049 AAGCAATCCGGGAAGTAGACTCCTCAGAAGATGACACTGATGAGGAGCCTGAGAACAGCCAGGCCACACAGGAG 4122
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4123 CCAAGATTGTCCCCCCACCCAGAAGCAAGCCACAATCTACTCCCTAAAGGTTCAGGAGAGGGTACAGAAGAGGA 4196
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4197 CACTTTCTTGCACAGGGATCTAAAGAAGCAGGGCCCTGTACTCTCAGGTCTAGTGACAGGGGCCACACTAGGCT 4270
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4271 CCCCCCGAGTAGACGTTCCTGGGCTCTCCCCAAGGAAGCTCAGCAGGCCACAAGCCTTTGAGGAAGCTACCAAC 4344
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4345 CCCTTACAAGTCCCTAGCCTGAGCAGGTCTGGACCCACAAGCCCCACCCCCTCTGAAGGCTGCTGGAAGGCCCA 4418
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4419 GCACCTCCACACACAGGCACTAACTGCACTTTGTCCCAGCTTTTCAGAACTTACCCCTACCGGTTGTTCTGCTG 4492
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4493 CCACCTCCACCTCTGGAAAGCCAGGGACATGGTCCTGGAAATTCCTTATTGAGGGTCCAGACAGAGCATCCACG 4566
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4567 AACAAGACCATAACAAGGAAAGGTGAACCAGCTAACTCCCAAGATACGAATACCACGGTCCCAAATCTTCTGAA 4640
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4641 GAACCTGTCTCCTGAGGAGGAGAAGCCACAGCCACCAAGTGTGCCTGGGCTGACCCATCCGCTTCTTGAGGTCC 4714
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4715 CCAGCCAGAACTGGCCATGGGAGTCTGAATGTGAACAAATGGAGAAAGAAGAACCATCCCTGAGCATCACCGAA 4788
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4789 GTGCCTGATTCCTCAGGCGACAGGAGGCAGGACATTCCATGCAGAGCCCACCCCCTGAGCCCAGAAACCCGGCC 4862
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4863 CAGCCTGCTCTGGAAAAGCCAAGAACTTGGGGGCCAGCAAGATCATCAGGACTTAGCACTGACATCAGATGAGC 4936
Query 2377 -------------- 2376
Sbjct 4937 TCTTAAAGCAAACC 4950
