Nucleotide Global Alignment
Description
- Query:
- TRCN0000488327
- Subject:
- XM_011541069.2
- Aligned Length:
- 4191
- Identities:
- 2373
- Gaps:
- 1815
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAGCGGAGCCGCTGCCGCGACCGACCGCAGCCGCCGCCGCCCGACCGCCGGGAGGATGGAGTTCAGCGGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCGGAGCTGTCTCAGTCTTTGCCGCCGCGCCGGCGAGCGCCGCCCGGGAGGCAGCGGCTGGAGGAGCGGACGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCCCGCGGGGCCCGAGGGCAAGGAGCAGGATGTAGTAACTGGAGTTAGTCCCCTGCTCTTCAGGAAACTCAGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AATCCTGACATATTTTCATCCACTGGAAAAGTTAAACTTCAGCGACAACTGAGTCAGGATGATTGTAAGTTATG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGAGGAAACCTGGCCAGCTCTCTATCGGGTAAGCAGCTGCTCCCTTTGTCCAGCAGTGTACATAGCAGTGTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GACAGGTGACTTGGCAGTCGTCAGGAGAAGCATCAAACCTGGTTCGAATGAGAAACCAGTCCCTTGGACAGTCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCACCTTCTCTTACTGCTGGCCTGAAGGAGTTGAGCCTTCCAAGAAGAGGCAGCTTAATCTCTACCCTTTGCCG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGAGCTGAAGTAAACCAGCACATGTTTTCACCCACATCTGCTCCAGCCCTCTTCCTCACTAAAGTCCCATTTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGCTGATTGTGCTTTGGCTACTTCTCCTCTTGCCATTTTCCTGAACCCACGAGCCCACAGCAGTCCTGGCACT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTTGTTCCAGCCGCCCACTGCCGTGGAGTTGTCGGACAAGTAACCGCAAGAGCTTGATTGTGACCTCTAGCAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATCACCTACACTACCACGGCCACACTCACCACTCCATGGCCACACAGGTAACAGTCCTTTGGACAGCCCCCGGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATTTCTCTCCAAATGCACCTGCTCACTTTTCTTTTGTTCCTGCCCGTAGCCATAGCCACAGAGCTGACAGGACT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GATGGGCGGCGCTGGTCTTTGGCCTCTTTGCCCTCTTCAGGATATGGAACTAACACTCCTAGCTCCACTGTCTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ATCATCATGCTCCTCACAGGAAAAGCTGCATCAGTTGCCTTTCCAGCCTACAGCTGATGAGCTGCACTTTTTGA 1036
Query 1 --------------------------------------------------------ATGCGGCCTCGCTCCCGG 18
||||||||||||||||||
Sbjct 1037 CGAAGCATTTCAGCACAGAGAGCGTACCAGATGAGGAAGGACGGCAGTCCCCAGCCATGCGGCCTCGCTCCCGG 1110
Query 19 AGCCTCAGTCCCGGACGATCCCCAGTATCCTTTGACAGTGAAATAATAATGATGAATCATGTTTACAAAGAAAG 92
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AGCCTCAGTCCCGGACGATCCCCAGTATCCTTTGACAGTGAAATAATAATGATGAATCATGTTTACAAAGAAAG 1184
Query 93 ATTCCCAAAG---------------------------------------------------------------- 102
||||||||||
Sbjct 1185 ATTCCCAAAGGCCACCGCACAAATGGAAGAGCGACTAGCAGAGTTTATTTCCTCCAACACTCCAGACAGCGTGC 1258
Query 103 -------------------------------------------------------------------------- 102
Sbjct 1259 TGCCCTTGGCAGATGGAGCCCTGAGCTTTATTCATCATCAGGTGATTGAGATGGCCCGAGACTGCCTGGATAAA 1332
Query 103 ------------------------------------------------------------------------GC 104
||
Sbjct 1333 TCTCGGAGTGGCCTCATTACATCACAATACTTCTACGAACTTCAAGATAATTTGGAGAAACTTTTACAAGATGC 1406
Query 105 TCATGAGCGCTCAGAGAGCTCAGAAGTGGCTTTTGTGATGCAGCTGGTGAAAAAGCTGATGATTATCATTGCCC 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TCATGAGCGCTCAGAGAGCTCAGAAGTGGCTTTTGTGATGCAGCTGGTGAAAAAGCTGATGATTATCATTGCCC 1480
Query 179 GCCCAGCACGTCTCCTGGAATGCCTGGAGTTTGACCCTGAAGAGTTCTACCACCTTTTAGAAGCAGCTGAGGGC 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GCCCAGCACGTCTCCTGGAATGCCTGGAGTTTGACCCTGAAGAGTTCTACCACCTTTTAGAAGCAGCTGAGGGC 1554
Query 253 CACGCCAAAGAGGGACAAGGGATTAAATGTGACATTCCCCGCTACATCGTTAGCCAGCTGGGCCTCACCCGGGA 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CACGCCAAAGAGGGACAAGGGATTAAATGTGACATTCCCCGCTACATCGTTAGCCAGCTGGGCCTCACCCGGGA 1628
Query 327 TCCCCTAGAAGAAATGGCCCAGTTGAGCAGCTGTGACAGTCCTGACACTCCAGAGACAGATGATTCTATTGAGG 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TCCCCTAGAAGAAATGGCCCAGTTGAGCAGCTGTGACAGTCCTGACACTCCAGAGACAGATGATTCTATTGAGG 1702
Query 401 GCCATGGGGCATCTCTGCCATCTAAAAAGACACCCTCTGAAGAGGACTTCGAGACCATTAAGCTCATCAGCAAT 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GCCATGGGGCATCTCTGCCATCTAAAAAGACACCCTCTGAAGAGGACTTCGAGACCATTAAGCTCATCAGCAAT 1776
Query 475 GGCGCCTATGGGGCTGTATTTCTGGTGCGGCACAAGTCCACCCGGCAGCGCTTTGCCATGAAGAAGATCAACAA 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GGCGCCTATGGGGCTGTATTTCTGGTGCGGCACAAGTCCACCCGGCAGCGCTTTGCCATGAAGAAGATCAACAA 1850
Query 549 GCAGAACCTGATCCTACGGAACCAGATCCAGCAGGCCTTCGTGGAGCGTGACATACTGACTTTCGCTGAGAACC 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GCAGAACCTGATCCTACGGAACCAGATCCAGCAGGCCTTCGTGGAGCGTGACATACTGACTTTCGCTGAGAACC 1924
Query 623 CCTTTGTGGTCAGCATGTTCTGCTCCTTTGATACCAAGCGCCACTTGTGCATGGTGATGGAGTACGTTGAAGGG 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CCTTTGTGGTCAGCATGTTCTGCTCCTTTGATACCAAGCGCCACTTGTGCATGGTGATGGAGTACGTTGAAGGG 1998
Query 697 GGAGACTGTGCCACTCTGCTGAAGAATATTGGGGCCCTGCCTGTGGACATGGTGCGTCTATACTTTGCGGAAAC 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GGAGACTGTGCCACTCTGCTGAAGAATATTGGGGCCCTGCCTGTGGACATGGTGCGTCTATACTTTGCGGAAAC 2072
Query 771 TGTGCTGGCCCTGGAGTACTTACACAACTATGGCATCGTGCACCGTGACCTCAAGCCTGACAACCTCCTAATTA 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TGTGCTGGCCCTGGAGTACTTACACAACTATGGCATCGTGCACCGTGACCTCAAGCCTGACAACCTCCTAATTA 2146
Query 845 CATCCATGGGGCACATCAAGCTCACGGACTTTGGACTGTCCAAAATGGGCCTCATGAGTCTGACAACGAACTTG 918
||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 2147 CATCCATGGGGCACATCAAGCTCACGGACTTTGGACTGTCCAAAATTGGCCTCATGAGTCTGACAACGAACTTG 2220
Query 919 TATGAGGGTCATATTGAAAAGGATGCCCGGGAATTCCTGGACAAGCAGGTATGCGGGACCCCAGAATACATTGC 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 TATGAGGGTCATATTGAAAAGGATGCCCGGGAATTCCTGGACAAGCAGGTATGCGGGACCCCAGAATACATTGC 2294
Query 993 GCCTGAGGTGATCCTGCGCCAGGGCTATGGGAAGCCAGTGGACTGGTGGGCCATGGGCATTATCCTGTATGAGT 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 GCCTGAGGTGATCCTGCGCCAGGGCTATGGGAAGCCAGTGGACTGGTGGGCCATGGGCATTATCCTGTATGAGT 2368
Query 1067 TCCTGGTGGGCTGCGTCCCTTTTTTTGGAGATACTCCGGAGGAGCTCTTTGGGCAGGTGATCAGTGATGAGATT 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 TCCTGGTGGGCTGCGTCCCTTTTTTTGGAGATACTCCGGAGGAGCTCTTTGGGCAGGTGATCAGTGATGAGATT 2442
Query 1141 GTGTGGCCTGAGGGTGATGAGGCACTGCCCCCAGACGCCCAGGACCTCACCTCCAAACTGCTCCACCAGAACCC 1214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 GTGTGGCCTGAGGGTGATGAGGCACTGCCCCCAGACGCCCAGGACCTCACCTCCAAACTGCTCCACCAGAACCC 2516
Query 1215 TCTGGAGAGACTTGGCACAGGCAGTGCCTATGAGGTGAAGCAGCACCCATTCTTTACTGGTCTGGACTGGACAG 1288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 TCTGGAGAGACTTGGCACAGGCAGTGCCTATGAGGTGAAGCAGCACCCATTCTTTACTGGTCTGGACTGGACAG 2590
Query 1289 GACTTCTCCGCCAGAAGGCTGAATTTATTCCTCAGTTGGAGTCAGAGGATGATACTAGCTATTTTGACACCCGC 1362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 GACTTCTCCGCCAGAAGGCTGAATTTATTCCTCAGTTGGAGTCAGAGGATGATACTAGCTATTTTGACACCCGC 2664
Query 1363 TCAGAGCGATACCACCACATGGACTCGGAGGATGAGGAAGAAGTGAGTGAGGATGGCTGCCTTGAGATCCGCCA 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 TCAGAGCGATACCACCACATGGACTCGGAGGATGAGGAAGAAGTGAGTGAGGATGGCTGCCTTGAGATCCGCCA 2738
Query 1437 GTTCTCTTCCTGCTCTCCAAGGTTCAACAAGGTGTACAGCAGCATGGAGCGGCTCTCACTGCTCGAGGAGCGCC 1510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 GTTCTCTTCCTGCTCTCCAAGGTTCAACAAGGTGTACAGCAGCATGGAGCGGCTCTCACTGCTCGAGGAGCGCC 2812
Query 1511 GGACACCACCCCCGACCAAGCGCAGCCTGAGTGAGGAGAAGGAGGACCATTCAGATGGCCTGGCAGGGCTCAAA 1584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 GGACACCACCCCCGACCAAGCGCAGCCTGAGTGAGGAGAAGGAGGACCATTCAGATGGCCTGGCAGGGCTCAAA 2886
Query 1585 GGCCGAGACCGGAGCTGGGTGATTGGCTCCCCTGAGATATTACGGAAGCGGCTGTCGGTGTCTGAGTCGTCCCA 1658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 2887 GGCCGAGACCGGAGCTGGGTGATTGGCTCCCCTGAGATATTACGGAAGCGGCTGTCGGTGTCTGAGTCATCCCA 2960
Query 1659 CACAGAGAGTGACTCAAGCCCTCCAATGACAGTGCGACGCCGCTGCTCAGGCCTCCTGGATGCGCCTCGGTTCC 1732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 CACAGAGAGTGACTCAAGCCCTCCAATGACAGTGCGACGCCGCTGCTCAGGCCTCCTGGATGCGCCTCGGTTCC 3034
Query 1733 CGGAGGGCCCTGAGGAGGCCAGCAGCACCCTCAGGAGGCAACCACAGGAGGGTATATGGGTCCTGACACCCCCA 1806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 CGGAGGGCCCTGAGGAGGCCAGCAGCACCCTCAGGAGGCAACCACAGGAGGGTATATGGGTCCTGACACCCCCA 3108
Query 1807 TCTGGAGAGGGGGTATCTGGGCCTGTCACTGAACACTCAGGGGAGCAGCGGCCAAAGCTGGATGAGGAAGCTGT 1880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 TCTGGAGAGGGGGTATCTGGGCCTGTCACTGAACACTCAGGGGAGCAGCGGCCAAAGCTGGATGAGGAAGCTGT 3182
Query 1881 TGGCCGGAGCAGTGGTTCCAGTCCAGCTATGGAGACCCGAGGCCGTGGGACCTCACAGCTGGCTGAGGGAGCCA 1954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 TGGCCGGAGCAGTGGTTCCAGTCCAGCTATGGAGACCCGAGGCCGTGGGACCTCACAGCTGGCTGAGGGAGCCA 3256
Query 1955 CAGCCAAGGCCATCAGTGACCTGGCTGTGCGTAGGGCCCGCCACCGGCTGCTCTCTGGGGACTCAACAGAGAAG 2028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 CAGCCAAGGCCATCAGTGACCTGGCTGTGCGTAGGGCCCGCCACCGGCTGCTCTCTGGGGACTCAACAGAGAAG 3330
Query 2029 CGCACTGCTCGCCCTGTCAACAAAGTGATCAAGTCCGCCTCAGCCACAGCCCTCTCACTCCTCATTCCTTCGGA 2102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 CGCACTGCTCGCCCTGTCAACAAAGTGATCAAGTCCGCCTCAGCCACAGCCCTCTCACTCCTCATTCCTTCGGA 3404
Query 2103 ACACCACACCTGCTCCCCGTTGGCCAGCCCCATGTCCCCACATTCTCAGTCGTCCAACCCATCATCCCGGGACT 2176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 ACACCACACCTGCTCCCCGTTGGCCAGCCCCATGTCCCCACATTCTCAGTCGTCCAACCCATCATCCCGGGACT 3478
Query 2177 CTTCTC----------------------------------------------------------------CAAG 2186
|||||| ||||
Sbjct 3479 CTTCTCCAAGCAGGGACTTCTTGCCAGCCCTTGGCAGCATGAGGCCTCCCATCATCATCCACCGAGCTGGCAAG 3552
Query 2187 AAGTATGGCTTCACCCTGCGGGCCATTCGCGTCTACATGGGTGACTCCGATGTCTACACCGTGCACCATATGGT 2260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 AAGTATGGCTTCACCCTGCGGGCCATTCGCGTCTACATGGGTGACTCCGATGTCTACACCGTGCACCATATGGT 3626
Query 2261 GTGGCACGTGGAGGATGGAGGTCCGGCCAGTGAGGCAGGGCTTCGTCAAGGTGACCTCATCACCCATGTCAATG 2334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 GTGGCACGTGGAGGATGGAGGTCCGGCCAGTGAGGCAGGGCTTCGTCAAGGTGACCTCATCACCCATGTCAATG 3700
Query 2335 GGGAACCTGTGCATGGCCTGGTGCACACGGAGGTGGTGGAGC-------------------------------- 2376
|||||||||||||||||||||||||||||||||||||.||||
Sbjct 3701 GGGAACCTGTGCATGGCCTGGTGCACACGGAGGTGGTAGAGCTGATCCTGAAGAGTGGAAACAAGGTGGCCATT 3774
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3775 TCAACAACTCCCCTGGAGAACACATCCATTAAAGTGGGGCCAGCTCGGAAGGGCAGCTACAAGGCCAAGATGGC 3848
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3849 CCGAAGGAGCAAGAGGAGCCGCGGCAAGGATGGGCAAGAAAGCAGAAAAAGGAGCTCCCTGTTCCGCAAGATCA 3922
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3923 CCAAGCAAGCATCCCTGCTCCACACCAGCCGCAGCCTTTCTTCCCTTAACCGCTCCTTGTCATCAGGGGAGAGT 3996
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 3997 GGGCCAGGCTCTCCCACACACAGCCACAGCCTTTCCCCCCGATCTCCCACTCAAGGCTACCGGGTGACCCCCGA 4070
Query 2377 -------------------------------------------------------------------------- 2376
Sbjct 4071 TGCTGTGCATTCAGGCAACTCTCACGGCCCAAGAGTGCGGAGCCACCCCGTTCACCACTACTCAAGAGGGTGCA 4144
Query 2377 ----------------------------------------------- 2376
Sbjct 4145 GTCGGCTGAGAAACTGGCAGCAGCACTTGCCGCCTCTGAGAAGAAGC 4191
