Nucleotide Global Alignment

Description

Query:
TRCN0000488354
Subject:
NM_019987.2
Aligned Length:
1905
Identities:
1611
Gaps:
27

Alignment

Query    1  ATGAATAGATACACAACAATCAGGCAGCTCGGGGATGGAACCTACGGTTCCGTCCTGCTGGGAAGAAGCATTGA  74
            |||||||||||||||||.||||.||||||.||||||||.||||||||.||.|||||||||||.|||||||||||
Sbjct    1  ATGAATAGATACACAACGATCAAGCAGCTTGGGGATGGGACCTACGGCTCTGTCCTGCTGGGGAGAAGCATTGA  74

Query   75  GTCTGGGGAGCTGATCGCTATTAAAAAAATGAAAAGAAAATTTTATTCCTGGGAGGAATGCATGAACCTTCGGG  148
            ||||||.||.|||||.||.||||||||||||||||||||.|||||.||||||||.|||||||||||||||||||
Sbjct   75  GTCTGGAGAACTGATTGCCATTAAAAAAATGAAAAGAAAGTTTTACTCCTGGGAAGAATGCATGAACCTTCGGG  148

Query  149  AGGTTAAGTCTTTAAAGAAGCTCAACCATGCCAATGTAGTCAAATTAAAAGAAGTTATCAGGGAAAATGATCAT  222
            ||||||||||||||||||||||.||.|||||||||.|.||.||.||||||||.||||||||||||||.||.|||
Sbjct  149  AGGTTAAGTCTTTAAAGAAGCTTAATCATGCCAATATCGTAAAGTTAAAAGAGGTTATCAGGGAAAACGACCAT  222

Query  223  CTTTATTTTATCTTCGAGTACATGAAGGAAAATCTTTACCAGCTCATTAAAGAGAGAAATAAGTTGTTTCCTGA  296
            |||||.||||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||||||||.||
Sbjct  223  CTTTACTTTATCTTCGAGTACATGAAGGAAAACCTTTACCAGCTCATTAAAGAAAGAAATAAGTTGTTTCCAGA  296

Query  297  GTCTGCTATAAGGAATATCATGTATCAGATATTACAAGGACTCGCATTTATTCACAAACACGGCTTCTTTCATC  370
            ||||||||||||||||||.|||||.||||||||.||||||||.|||||.||||||||||||||.|||||.||.|
Sbjct  297  GTCTGCTATAAGGAATATAATGTACCAGATATTGCAAGGACTGGCATTCATTCACAAACACGGTTTCTTCCACC  370

Query  371  GAGACTTAAAGCCTGAGAACCTCCTCTGCATGGGACCAGAACTTGTGAAAATTGCAGACTTTGGTTTGGCCCGA  444
            |.||||||||.||.||||||||||||||||||||||||||||||||||||||.||.||||||||.|||||.|||
Sbjct  371  GGGACTTAAAACCCGAGAACCTCCTCTGCATGGGACCAGAACTTGTGAAAATCGCCGACTTTGGATTGGCTCGA  444

Query  445  GAAATACGATCAAAACCTCCATATACAGATTATGTATCTACCAGATGGTACAGGGCTCCAGAAGTACTCCTGAG  518
            |||||.|||||||.||||||.||.|||||.|||||.|||||.||||||||||||||||||||.|||||.|||||
Sbjct  445  GAAATCCGATCAAGACCTCCGTACACAGACTATGTGTCTACTAGATGGTACAGGGCTCCAGAGGTACTGCTGAG  518

Query  519  GTCTACCAACTACAGCTCCCCCATTGACGTCTGGGCGGTGGGCTGCATCATGGCAGAAGTTTACACCCTCAGGC  592
            .||.||||||||||||||||||||||||.||||||||||.||||||||||||||.||.||.|||||.|||.|||
Sbjct  519  ATCCACCAACTACAGCTCCCCCATTGACATCTGGGCGGTAGGCTGCATCATGGCGGAGGTGTACACGCTCCGGC  592

Query  593  CACTCTTCCCTGGAGCCAGTGAAATTGACACAATATTCAAAATTTGCCAAGTGCTGGGGACACCAAAAAAGACT  666
            |.||.||||||||.||||||||||||||||||||.||||||||||||||||||.||||.||||||||.||||||
Sbjct  593  CCCTTTTCCCTGGGGCCAGTGAAATTGACACAATTTTCAAAATTTGCCAAGTGTTGGGAACACCAAAGAAGACT  666

Query  667  GACTGGCCTGAAGGCTATCAACTTTCAAGTGCAATGAACTTCCGTTGGCCACAGTGTGTACCCAATAACTTAAA  740
            |||||||||||||||||.||.||.||||||||.|||||.||||..|||||.|||||..||||||||||||||||
Sbjct  667  GACTGGCCTGAAGGCTACCAGCTGTCAAGTGCTATGAATTTCCTCTGGCCCCAGTGCATACCCAATAACTTAAA  740

Query  741  GACCTTGATTCCCAATGCTAGCAGTGAAGCAGTCCAGCTCCTGAGAGACATGCTTCAGTGGGATCCCAAGAAAC  814
            |||..|.||.||.|||||||||||.|||||..|.|||||||||||||||.||||||||||||||||||||||||
Sbjct  741  GACTCTAATCCCAAATGCTAGCAGCGAAGCCATTCAGCTCCTGAGAGACTTGCTTCAGTGGGATCCCAAGAAAC  814

Query  815  GACCAACAGCTAGTCAGGCACTTCGATATCCTTACTTCCAAGTTGGACACCCACTAGGCAGCACCA-CACAAAA  887
            |||||||.|||||||||||.||||||||||||||||||||..|.|||||||||||.||||.||.|| ||     
Sbjct  815  GACCAACCGCTAGTCAGGCTCTTCGATATCCTTACTTCCAGATCGGACACCCACTGGGCATCATCAGCA-----  883

Query  888  CCTTCAGGATTCAGAAAAACCACAGAAAGGCATCCTGGAAAAGGCAGGCCCACCTCCTTATATTAAGCCAGTCC  961
                 ||||.||||.|||||||||||.||...|||.|||.|||.|||||||.||||||||.||.|||||||.||
Sbjct  884  -----AGGACTCAGGAAAACCACAGAGAGAGGTCCAGGACAAGACAGGCCCTCCTCCTTACATCAAGCCAGCCC  952

Query  962  CACCTGCCCAGCCACCAGCCAAGCCACACACACGAATTTCTTCACGAC--AGCATCAAGCCAGCCAGCCCCCTC  1033
            |.|||||||||.|.||.||||||.||.|.||.|..|||||||||||||  |||  ||||||||.||||||||||
Sbjct  953  CTCCTGCCCAGGCCCCGGCCAAGGCATATACGCTGATTTCTTCACGACCAAGC--CAAGCCAGTCAGCCCCCTC  1024

Query 1034  TGCA-TCTCACGT--ACCCCTACAAAGCAGAGGTCTCCAGGACAGATCACCCAAGCCATCTCCAGGAGGACAAG  1104
            .||| |||   ||  ||||||||||||..||.|||||.|||||.||.||.|..||||||.|.|||||||.||||
Sbjct 1025  AGCATTCT---GTGCACCCCTACAAAGGCGATGTCTCTAGGACTGAGCAGCTGAGCCATGTTCAGGAGGGCAAG  1095

Query 1105  CCAAGCCCGTTGC--TTTTCCCATCCCTCCACAACAAGCATCCACAGTCGAAAATCACAGCTGGCCTGGAGCAC  1176
            ||||||||  |.|  |.|||||||||||||||||.|||.|||..|||.|.||||||..|||..|||||||.||.
Sbjct 1096  CCAAGCCC--TCCATTCTTCCCATCCCTCCACAATAAGAATCTTCAGCCAAAAATCCTAGCCAGCCTGGAACAG  1167

Query 1177  AAAAATGGTGAGATAAAGCCAAAGAGTAGGAGAAGGTGGGGTCTTATTTCCAGGTCAACAAAGGATTCAGATGA  1250
            |||||||||||.||.|||||||||||.||||||||.||||||||.||.||||||||.|||||||.|||.||.||
Sbjct 1168  AAAAATGGTGAAATCAAGCCAAAGAGCAGGAGAAGATGGGGTCTCATCTCCAGGTCGACAAAGGGTTCTGACGA  1241

Query 1251  TTGGGCTGACTTGGATGACTTGGATTTCAGTCCATCCCTCAGCAGGATTGACCTGAAAAACAAGAAAAGACAGA  1324
            .|||||.||||||||||||||.||.||||||||.||.||||.||||||.||..|.|||||||||||.|||||||
Sbjct 1242  CTGGGCCGACTTGGATGACTTAGACTTCAGTCCCTCTCTCACCAGGATAGATGTAAAAAACAAGAAGAGACAGA  1315

Query 1325  GTGATGACACTCTCTGCAGGTTTGAGAGTGTTTTGGACCTGAAGCCCTCTGAGCCTGTGGGCACAGGAAACAGT  1398
            ||||||||||.||||||||||||||.||||||.|||||||||||||.||||||.|.|||||.|||||||.||.|
Sbjct 1316  GTGATGACACCCTCTGCAGGTTTGAAAGTGTTCTGGACCTGAAGCCATCTGAGTCAGTGGGTACAGGAACCACT  1389

Query 1399  GCCCCCACCCAGACGTCATATCAGCGGCGAGACACGCCCACCCTG-AGATCTGCAGCCAAGCAGCACTATTTGA  1471
            |.|.||||.|||.|.||.|..|||.||.||||||||||.|||||| || ||..||||.|||||||||||.||||
Sbjct 1390  GTCTCCACGCAGGCTTCCTCGCAGAGGAGAGACACGCCGACCCTGCAG-TCCTCAGCAAAGCAGCACTACTTGA  1462

Query 1472  AGCACTCTCGATACTTGCCTGGGATCAGTATAAGAAATGGCATACTCTCGAATCCAGGCAAGGAATTTATTCCA  1545
            ||||||||||.|||||||||||.||.|.|||||||||||||.|.|||.|.||||||||||||||.|||.|||||
Sbjct 1463  AGCACTCTCGCTACTTGCCTGGAATAAATATAAGAAATGGCGTGCTCCCAAATCCAGGCAAGGACTTTCTTCCA  1536

Query 1546  CCTAATCCATGGTCTAGTTCTGGCTTGTCTGGAAAATCTTCAGGGACAATGTCAGTAATCAGCAAAGTAAATTC  1619
            .|.|||.|||||||.|||||.|||||||||||||||||||||||.|||.|.||||||.|.||||||.|||.|||
Sbjct 1537  TCAAATTCATGGTCCAGTTCCGGCTTGTCTGGAAAATCTTCAGGAACAGTATCAGTAGTGAGCAAAATAACTTC  1610

Query 1620  AGTTGGTTCCAGCTCTACAAGTTCTAGTGGACTGACTGGAAACTATGTCCCTTCCTTTCTGAAAAAAGAAATCG  1693
            ||||||.||..|||||.|.||.|||||||||||||||||||.|||..|.|||||||||||||||||.|||||||
Sbjct 1611  AGTTGGCTCAGGCTCTGCGAGCTCTAGTGGACTGACTGGAAGCTACATTCCTTCCTTTCTGAAAAAGGAAATCG  1684

Query 1694  GTTCTGCTATGCAGAGGGTACACCTAGCACCTATTCCAGACCCTTCCCCTGGTTATTCCTCCCTGAAGGCCATG  1767
            ||||||..|||||||||||.||.||.||.||..|..|||.||||.||||.||.||.||.|||||.||||||.||
Sbjct 1685  GTTCTGTCATGCAGAGGGTTCAGCTGGCGCCCCTCGCAGCCCCTCCCCCCGGCTACTCTTCCCTCAAGGCCGTG  1758

Query 1768  AGACCTCATCCTGGGCGACCATTCTTCCACACCCAGCCTAGAAGCACTCCTGGGTTGATACCACGGCCTCCAGC  1841
            ||||||||.||.|||.|.||.|||||.|||||||||||.||.|||||.||.||.|||||.||.||.||||||||
Sbjct 1759  AGACCTCACCCGGGGAGGCCTTTCTTTCACACCCAGCCCAGGAGCACGCCCGGCTTGATCCCCCGACCTCCAGC  1832

Query 1842  CGCCCAGCCAGTGCATGGCCGGACAGACTGGGCTTCCAAGTACGCATCTCGGCGA  1896
            .||.|||||.|||||.|||.|||.|||||||.|||||||||||.||||.|||||.
Sbjct 1833  TGCTCAGCCTGTGCACGGCAGGATAGACTGGTCTTCCAAGTACCCATCCCGGCGG  1887

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