Nucleotide Global Alignment

Description

Query:
TRCN0000488394
Subject:
NM_172962.1
Aligned Length:
2733
Identities:
1130
Gaps:
1456

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGGGACAGGGACCCTCTCATCTCTACTGCTGCTGCTACTCTTGGTGACAATTGGAGATGCTGACATGAAGGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACATTTTGACCCTGCCAAGTGCCGCTATGCCCTGGGCATGCAGGACCGCACCATTCCTGACAGCGATATCTCTG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGTCCAGCTCCTGGTCGGACTCTACCGCTGCCCGCCACAGCAGGCTGGAAAGCAGTGATGGAGATGGGGCTTGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGCCCTGCAGGGCCTGTGTTCCCCAAAGAAGAGGAGTACTTGCAGGTGGACCTTCGTAGGCTACACCTGGTGGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCTGGTGGGCACCCAGGGCCGCCATGCTGGGGGTCTGGGCAAAGAGTTCTCCCGAAGCTATCGGTTGCGTTACT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CCCGAGATGGCCGCCGCTGGATGGACTGGAAGGACCGCTGGGGACAGGAGGTGATTTCGGGTAACGAGGATCCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GGGGGAGTAGTGCTGAAGGACCTTGGGCCCCCCATGGTGGCCCGGCTGGTCCGCTTCTACCCCAGGGCTGACCG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGTCATGAGTGTCTGTCTTCGGGTGGAGCTCTATGGCTGCCTCTGGCGGGATGGACTCCTGTCATATACAGCCC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CCGTGGGGCAGACCATGCAGTTATCTGAGGTGATGGTACATCTCAATGATTCCACTTACGATGGATATACTGCT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GGAGGGCTGCAGTATGGCGGTCTGGGCCAGCTGGCAGATGGCGTGGTGGGCCTGGATGATTTCAGGCAGAGCCA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGAGCTGCGGGTCTGGCCAGGCTATGACTATGTGGGATGGAGCAATCAGAGCTTCCCCACGGGCTACGTGGAGA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGGAGTTTGAGTTTGATCGGTTGAGGACCTTCCAGACCATGCAGGTCCACTGTAACAACATGCACACTCTGGGA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GCCCGCCTACCAGGCGGGGTGGAATGCCGGTTTAAAAGGGGTCCCGCCATGGCCTGGGAAGGAGAGCCTGTCCG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CCATGCTCTGGGAGGCAGCCTTGGAGACCCCAGAGCCCGGGCCATCTCAGTGCCCCTGGGTGGCCACGTGGGCC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GCTTTCTGCAGTGCAGATTCCTCTTTGCAGGTCCTTGGTTACTCTTCAGTGAGATCTCTTTCATCTCAGATGTG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GTGAACGACTCCTCTGACACCTTCCCACCAGCCCCCTGGTGGCCACCTGGCCCGCCTCCCACCAACTTCAGCAG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CTTGGAGCTGGAGCCCCGGGGTCAACAGCCAGTGGCCAAGGCGGAGGGGAGCCCAACTGCCATCCTCATTGGCT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GCCTGGTGGCCATCATCCTGCTGCTGCTTCTCATCATCGCGCTGATGCTCTGGAGGCTGCACTGGCGCCGGCTG  1332

Query    1  -----CA--------CGGAGGGTGTTGGAAGAGGAGCTGACGGTTCACCTCTCTGTCCCTGGGGACACTATCCT  61
                 ||        ||..|.||||||||.||||||||||||||||||||.|||||||||||||||||.|||||
Sbjct 1333  CTCAGCAAGGCTGAGCGCCGCGTGTTGGAGGAGGAGCTGACGGTTCACCTTTCTGTCCCTGGGGACACCATCCT  1406

Query   62  CATCAACAACCGCCCAGGTCCTAGAGAGCCACCCCCGTACCAGGAGCCCCGGCCTCGTGGGAATCCGCCCCACT  135
            ||||||||||||||||||.||..|||||||||||||.||||||||||||||||||||.||||.|||.|||||.|
Sbjct 1407  CATCAACAACCGCCCAGGACCCCGAGAGCCACCCCCTTACCAGGAGCCCCGGCCTCGGGGGACTCCACCCCATT  1480

Query  136  CCGCTCCCTGTGTCCCCAATGGCTCTGCGTTGCTGCTCTCCAATCCAGCCTACCGCCTCCTTCTGGCCACTTAC  209
            |.||.|||||.||||||||.||||||                                                
Sbjct 1481  CTGCACCCTGCGTCCCCAACGGCTCT------------------------------------------------  1506

Query  210  GCCCGTCCCCCTCGAGGCCCGGGCCCCCCCACACCCGCCTGGGCCAAACCCACCAACACCCAGGCCTACAGTGG  283
                                                                           ||||.||||||
Sbjct 1507  ---------------------------------------------------------------GCCTGCAGTGG  1517

Query  284  GGACTATATGGAGCCTGAGAAGCCAGGCGCCCCGCTTCTGCCCCCACCTCCCCAGAACAGCGTCCCCCATTATG  357
            |||||||||||||||.||||||||.||.|||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 1518  GGACTATATGGAGCCCGAGAAGCCGGGTGCCCCGCTTCTACCCCCACCTCCCCAGAACAGCGTCCCCCATTATG  1591

Query  358  CCGAGGCTGACATTGTTACCCTGCAGGGCGTCACCGGGGGCAACACCTATGCTGTGCCTGCACTGCCCCCAGGG  431
            ||||.|||||||||||.|||||||||||||||||.||||||||||||||.||||||||||||||||||||||||
Sbjct 1592  CCGAAGCTGACATTGTCACCCTGCAGGGCGTCACTGGGGGCAACACCTACGCTGTGCCTGCACTGCCCCCAGGG  1665

Query  432  GCAGTCGGGGATGGGCCCCCCAGAGTGGATTTCCCTCGATCTCGACTCCGCTTCAAGGAGAAGCTTGGCGAGGG  505
            ||.||.||||||||||||||||||||||||||||||||.||.||.|||||||||||||||||||||||||||||
Sbjct 1666  GCGGTTGGGGATGGGCCCCCCAGAGTGGATTTCCCTCGGTCACGGCTCCGCTTCAAGGAGAAGCTTGGCGAGGG  1739

Query  506  CCAGTTTGGGGAGGTGCACCTGTGTGAGGTCGACAGCCCTCAAGATCTGGTCAGTCTTGATTTCCCCCTTAATG  579
            |||.|||||||||||.|||||||||||.||.||...|||.|||||||||||||||..|||.|||||..|.|.||
Sbjct 1740  CCAATTTGGGGAGGTACACCTGTGTGAAGTAGAGGACCCGCAAGATCTGGTCAGTAGTGACTTCCCTATCAGTG  1813

Query  580  TGCGTAAGGGACACCCTTTGCTGGTAGCTGTCAAGATCTTACGGCCAGATGCCACCAAGAATGCCAGGAATGAT  653
            |||..|||||||||||.|||||||||||.||.||||||.|.|||||||||||||||||.|||||||||||||||
Sbjct 1814  TGCACAAGGGACACCCCTTGCTGGTAGCAGTGAAGATCCTCCGGCCAGATGCCACCAAAAATGCCAGGAATGAT  1887

Query  654  TTCCTGAAAGAGGTGAAGATCATGTCGAGGCTCAAGGACCCAAACATCATTCGGCTGCTGGGCGTGTGTGTGCA  727
            ||||||||.|||||.|||||||||||..||||.|||||||||||||||||.|||||.|||||.|||||||||||
Sbjct 1888  TTCCTGAAGGAGGTAAAGATCATGTCACGGCTGAAGGACCCAAACATCATCCGGCTCCTGGGTGTGTGTGTGCA  1961

Query  728  GGACGACCCCCTCTGCATGATTACTGACTACATGGAGAACGGCGACCTCAACCAGTTCCTCAGTGCCCACCAGC  801
            |||.|||||||||||||||||.||.||||||||||||||||||||.||.|||||||||||||||||||.|||||
Sbjct 1962  GGATGACCCCCTCTGCATGATCACAGACTACATGGAGAACGGCGATCTGAACCAGTTCCTCAGTGCCCGCCAGC  2035

Query  802  TGGAGGACAAGGCAGCCGAGGGGGCCCCTGGGGACGGGCAGGCTGCGCAGGGGCCCACCATCAGCTACCCAATG  875
            |||||.|||||||..|..|||||..|.||||||||....||.|||..|||||||||||.|||||||||||.|||
Sbjct 2036  TGGAGAACAAGGCCACTCAGGGGCTCTCTGGGGACACAGAGTCTGACCAGGGGCCCACAATCAGCTACCCTATG  2109

Query  876  CTGCTGCATGTGGCAGCCCAGATCGCCTCCGGCATGCGCTATCTGGCCACACTCAACTTTGTACATCGGGACCT  949
            |||.|.||.||||..||||||||||||||.||||||||.|||||.|||||.||.||||||||.|||||||||||
Sbjct 2110  CTGTTACACGTGGGGGCCCAGATCGCCTCTGGCATGCGTTATCTCGCCACGCTGAACTTTGTGCATCGGGACCT  2183

Query  950  GGCCACGCGGAACTGCCTAGTTGGGGAAAATTTCACCATCAAAATCGCAGACTTTGGCATGAGCCGGAACCTCT  1023
            ||||||.|||||||||.|.|||||||||||||||||||||||||||||.||||||||||||||||||||.||||
Sbjct 2184  GGCCACCCGGAACTGCTTGGTTGGGGAAAATTTCACCATCAAAATCGCCGACTTTGGCATGAGCCGGAATCTCT  2257

Query 1024  ATGCTGGGGACTATTACCGTGTGCAGGGCCGGGCAGTGCTGCCCATCCGCTGGATGGCCTGGGAGTGCATCCTC  1097
            |.||||||||.|||||||||||.|||||||||||.||||||||||||.|.||||||||.|||||||||||.|||
Sbjct 2258  ACGCTGGGGATTATTACCGTGTCCAGGGCCGGGCGGTGCTGCCCATCAGGTGGATGGCTTGGGAGTGCATTCTC  2331

Query 1098  ATGGGGAAGTTCACGACTGCGAGTGACGTGTGGGCCTTTGGTGTGACCCTGTGGGAGGTGCTGATGCTCTGTAG  1171
            ||||||||||||||.||.||.||||||||.||||||||.||.|||||||||||||||||||||||||||||.||
Sbjct 2332  ATGGGGAAGTTCACAACAGCCAGTGACGTTTGGGCCTTCGGAGTGACCCTGTGGGAGGTGCTGATGCTCTGCAG  2405

Query 1172  GGCCCAGCCCTTTGGGCAGCTCACCGACGAGCAGGTCATCGAGAACGCGGGGGAGTTCTTCCGGGACCAGGGCC  1245
            |.|||||||||||||||||||.||.||.||||||||.||||||||.||.||.|||||||||.||||||||||||
Sbjct 2406  GTCCCAGCCCTTTGGGCAGCTTACAGATGAGCAGGTTATCGAGAATGCCGGCGAGTTCTTCAGGGACCAGGGCC  2479

Query 1246  GGCAGGTGTACCTGTCCCGGCCGCCTGCCTGCCCGCAGGGCCTATATGAGCTGATGCTTCGGTGCTGGAGCCGG  1319
            |||||||.|||.|||||.||||.||.||||||||.|||..|||.||||||||||||||.|||||.|||||||||
Sbjct 2480  GGCAGGTCTACTTGTCCAGGCCACCCGCCTGCCCACAGACCCTGTATGAGCTGATGCTCCGGTGTTGGAGCCGG  2553

Query 1320  GAGTCTGAGCAGCGACCACCCTTTTCCCAGCTGCATCGGTTCCTGGCAGAGGATGCACTCAACACGGTG  1388
            |||.|.||||||||.||.|||||..|||||||.||||||||||||||.||.|||||.||||||||||||
Sbjct 2554  GAGCCCGAGCAGCGGCCGCCCTTCGCCCAGCTTCATCGGTTCCTGGCGGATGATGCGCTCAACACGGTG  2622

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