Nucleotide Global Alignment

Description

• Query: TRCN0000488486
• Subject: NM_001039138.2
• Aligned Length: 1655
• Identities: 1241
• Gaps: 130

Alignment

Query    1  ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT  74
            |||||||||||.|..|||||||||||||||||||||||.||||||||.|.||||||..|.||||||||.||.||
Sbjct    1  ATGGCCACCACCGCCACCTGCACCCGCTTCACCGACGACTACCAGCTTTTCGAGGAGCTCGGCAAGGGTGCCTT  74

Query   75  CTCTGTGGTCCGACGCTGTGTCAAG-----CTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAA  143
            |||.||||||||..|.|||||.|||     .|||.|     .||.||.|||||.||.||.||||||||.|||||
Sbjct   75  CTCAGTGGTCCGGAGGTGTGTAAAGAAAACATCTAC-----GCAGGAATATGCTGCAAAAATCATCAATACCAA  143

Query  144  GAAGCTGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACA  217
            ||||.||||.|||.|||||||.|||||.||.||..|||||||.|||||.|||||.||||||||.|||.|.||||
Sbjct  144  GAAGTTGTCCGCCCGAGATCATCAGAAACTAGAACGAGAGGCCCGGATATGCCGACTTCTGAAACATCCAAACA  217

Query  218  TCGTGCGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAG  291
            |.|||||||||||.|||||.||.||.||.||.||.||.||||||||.||.||.||.||.||.||.||.||||||
Sbjct  218  TTGTGCGTCTCCATGACAGTATTTCTGAAGAAGGGTTTCACTACCTCGTGTTTGACCTTGTTACCGGAGGGGAG  291

Query  292  CTCTTTGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGA  365
            .|.|||||||||||||||||.||||||||||||||.||.|||||||||||.||||||||.||.|||||||||||
Sbjct  292  TTGTTTGAAGACATTGTGGCCAGAGAGTACTACAGTGAAGCTGATGCCAGCCACTGTATACATCAGATCCTGGA  365

Query  366  GGCCGTTCTCCATTGTCACCA-AATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGC  438
            |...|||..|||....||||| .|| |...||||||||.|.||.||.|||||.||||||.||||.|||||.||.
Sbjct  366  GAGTGTTAACCACATCCACCAGCAT-GACATCGTCCACCGGGATCTGAAGCCTGAGAACTTGCTGCTGGCGAGT  438

Query  439  AAGTGCAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATG  512
            ||.|||||.||.|||||.||.|||||.||.||.||.|||||.||.|||||.||.|||||.||.||||||||.||
Sbjct  439  AAATGCAAGGGTGCTGCGGTCAAGCTAGCTGATTTTGGCCTGGCCATCGAAGTACAGGGAGAGCAGCAGGCTTG  512

Query  513  GTTTGGTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGG  586
            |||||||||.||.|||||.|||||.|||.||||||||||||||.|..|.|||||..|.|||||.||.|||||||
Sbjct  513  GTTTGGTTTTGCCGGCACCCCAGGTTACTTGTCCCCTGAGGTCTTGAGGAAAGATCCCTATGGAAAACCTGTGG  586

Query  587  ACATCTGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCAC  660
            ||||||||||.||.|||||.||||||||.|||||.||.|||||||||||.|||||||||||.|||||.||||||
Sbjct  587  ACATCTGGGCCTGCGGGGTCATCCTGTATATCCTCCTGGTGGGCTACCCTCCCTTCTGGGATGAGGATCAGCAC  660

Query  661  AAGCTGTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGC  734
            ||||||||.|||||||||||.|||||.|||||.||.|||||.||.||.||.||||||||.||||||||||||||
Sbjct  661  AAGCTGTATCAGCAGATCAAAGCTGGAGCCTACGATTTCCCATCACCAGAATGGGACACAGTCACTCCTGAAGC  734

Query  735  CAAAAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACC  808
            .||.|||.|.||||||||||||||||||||.||||||||.|||||||||||.|||.|..||||.||.|||||||
Sbjct  735  TAAGAACTTGATCAACCAGATGCTGACCATAAACCCTGCAAAGCGCATCACGGCCGACCAGGCTCTCAAGCACC  808

Query  809  CGTGGGTCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCT---GAAAAAG  879
            |.||||||||.|||||.||.|||||.||||||||||||||..|.||.|||||.||.||||| ||   |.|||  
Sbjct  809  CATGGGTCTGTCAACGGTCTACGGTGGCATCCATGATGCATCGCCAAGAGACGGTAGAGTG-CTTACGCAAA--  879

Query  880  TTCAATGCCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAGTGGGCAG  953
            |||||.|||.|||||||.||.|||||.|||||||||||.||||||||.|.|.|..||||.||.|||        
Sbjct  880  TTCAACGCCCGGAGAAAACTGAAGGGTGCCATCCTCACAACCATGCTTGTCTCCAGGAACTTTTCA--------  945

Query  954  ACAGACCACCGCTCCGGCCACAATGTCCACCGCGGCCTCCGGCACCACCATGGGGCTGGTGGAACAAGCCAAGA  1027
                      |||                                                      |||||.|
Sbjct  946  ----------GCT------------------------------------------------------GCCAAAA  955

Query 1028  GTTTACTCAACAAGAAAGCAGAT---GGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGC-----AGCCG  1093
            |..||.|.||||||||..|||||   ||.||||||||.||||..||   ||.|||||||||| |     |||  
Sbjct  956  GCCTATTGAACAAGAAGTCAGATGGCGGTGTCAAGCCACAGAGCAA---CAACAAAAACAGT-CTCGTAAGC--  1023

Query 1094  CCACCAGCCCCAAAGGGAC-GCTTCCTCCTG----CCGCCCTGGAGCCTCAAACCACCGTCATCCATAACCCAG  1162
               |||||||  |||.|.| ||..|||  ||    |.|||.||||.||.|||||||||||..|.|||||     
Sbjct 1024  ---CCAGCCC--AAGAGCCTGCGCCCT--TGCAGACGGCCATGGAACCACAAACCACCGTGGTACATAA-----  1085

Query 1163  TG-----GACGGGATTAAGGAGTCTTCTGACAG-TGCCAATACCACCATAGAGGATGAAGACGCT-AAAGCCCG  1229
            ||     ||.|||||.||||..||..|.||.|| || .||.|||||.|.|||.||.||||| .|| ||||...|
Sbjct 1086  TGCTACAGATGGGATCAAGGGCTCCACAGAGAGCTG-TAACACCACTACAGAAGACGAAGA-TCTCAAAGTGAG  1157

Query 1230  GAAGCAGGAGATCATTAAGACCACGGAGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTACGCGA  1303
            .||.||.||.||||||||||.|||.||.||.||.|||||.|||.|||||||.||.|||||||||||||||.|||
Sbjct 1158  AAAACAAGAAATCATTAAGATCACAGAACAACTGATCGAAGCCATCAACAATGGGGACTTTGAGGCCTACACGA  1231

Query 1304  AAATCTGTGACCCAGGGCTGACCTCGTTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTTCCAC  1377
            |.||.||||||||.||.||.||.||.||||||||.|||||.||.||.|||||.||.|||||.|||||.|||||.
Sbjct 1232  AGATTTGTGACCCGGGCCTCACATCCTTTGAGCCAGAAGCCCTTGGTAACCTCGTGGAAGGAATGGATTTCCAT  1305

Query 1378  AGATTCTACTTCGAGAACCTGCTGGCCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACACGTGCA  1451
            |..||.|||||.|||||.||.|||.||||||||||||||||.||||||||.||||||||.|||||.|||||.||
Sbjct 1306  AAGTTTTACTTTGAGAATCTCCTGTCCAAGAACAGCAAGCCTATCCACACCACCATCCTAAACCCTCACGTCCA  1379

Query 1452  CGTCATTGGAGAGGATGCCGCCTGCATCGCTTACATCCGGCTCACGCAGTACATTGACGGGCAGGGCCGGCCCC  1525
            |||.|||||.|||||.||.||.||||||||.||.|||||||||||.||||||||.|||||||||||.|||||.|
Sbjct 1380  CGTGATTGGGGAGGACGCAGCTTGCATCGCCTATATCCGGCTCACTCAGTACATCGACGGGCAGGGTCGGCCTC  1453

Query 1526  GCACCAGCCAGTCTGAGGAGACCCGCGTGTGGCACCGCCGCGACGGCAAGTGGCAGAACGTGCACTTCCACTGC  1599
            |||||||.|||||.|||||||||||.||||||||||||||.||.||||||||||..||.||.||||..||||||
Sbjct 1454  GCACCAGTCAGTCAGAGGAGACCCGGGTGTGGCACCGCCGGGATGGCAAGTGGCTCAATGTCCACTATCACTGC  1527

Query 1600  TCGGGCGCGCCTGTGGCCCCGCTGCAG  1626
            ||.||.||.||||..||.|||||.|||
Sbjct 1528  TCAGGGGCCCCTGCCGCACCGCTACAG  1554