Nucleotide Global Alignment
Description
- Query:
- TRCN0000488486
- Subject:
- NM_001367539.1
- Aligned Length:
- 1756
- Identities:
- 1061
- Gaps:
- 464
Alignment
Query 1 ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CTCTGTGGTCCGACGCTGTGTCAAGCTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAAGAAGC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACATCGTG 222
.||.||.||||||||.|||.|.||||||||
Sbjct 1 -------------------------------------------ATGTCGACTTCTGAAACATCCAAACATCGT- 30
Query 223 CGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTCTT 296
||.||.||.||||||||.||
Sbjct 31 ------------------------------------------------------GTTACCGGCGGGGAGCTGTT 50
Query 297 TGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCCG 370
|||||||||||||||.||||||||||||||.||.||.||||||||.||||||||.||.|||||.||||||...|
Sbjct 51 TGAAGACATTGTGGCCAGAGAGTACTACAGTGAAGCAGATGCCAGCCACTGTATACATCAGATTCTGGAGAGTG 124
Query 371 TTCTCCATTGTCACCA-AATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGTG 443
||..|||....||||| .|| |...||||||||||.|||||.|||||.|||||||||||.|||||.||.||.||
Sbjct 125 TTAACCACATCCACCAGCAT-GACATCGTCCACAGGGACCTGAAGCCTGAGAACCTGCTGCTGGCGAGTAAATG 197
Query 444 CAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTTG 517
|||.||.||.||.||.||||||||.||.||.||||||||.|||||.||.|||||.||.||||||||.|||||||
Sbjct 198 CAAGGGTGCCGCCGTCAAGCTGGCTGATTTTGGCCTAGCCATCGAAGTACAGGGAGAGCAGCAGGCTTGGTTTG 271
Query 518 GTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACATC 591
||||.||||||||.|||||.|||.||||||||||||||.|..|.|||||..|.|||||.||.||||||||.|||
Sbjct 272 GTTTTGCTGGCACCCCAGGTTACTTGTCCCCTGAGGTCTTGAGGAAAGATCCCTATGGAAAACCTGTGGATATC 345
Query 592 TGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGCT 665
|||||.||.|||||.||||||||.|||||.||.||||||||.||.|||||||||||.|||||.|||||||||||
Sbjct 346 TGGGCCTGCGGGGTCATCCTGTATATCCTCCTGGTGGGCTATCCTCCCTTCTGGGATGAGGATCAGCACAAGCT 419
Query 666 GTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAAA 739
|||.|||||||||||||||||.||||||||.|||||.||.||.||.||||||||.||.||||||||||||||.|
Sbjct 420 GTATCAGCAGATCAAGGCTGGAGCCTATGATTTCCCATCACCAGAATGGGACACGGTAACTCCTGAAGCCAAGA 493
Query 740 ACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACCCGTGG 813
||.|.||||||||||||||||||||.|||||.||.|||||||||||.||..|..||||.||.||||||||||||
Sbjct 494 ACTTGATCAACCAGATGCTGACCATAAACCCAGCAAAGCGCATCACGGCTGACCAGGCTCTCAAGCACCCGTGG 567
Query 814 GTCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCAATGC 887
|||||.|||||.||||||||.||||||||||||||..|.||||||||||||||||||.||...|||||||||||
Sbjct 568 GTCTGTCAACGATCCACGGTGGCATCCATGATGCATCGTCAGGAGACTGTGGAGTGTTTGCGCAAGTTCAATGC 641
Query 888 CAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAGTGGGCAGACAGACCA 961
|.|||||||.||.|||||.|||||||||||.||||||||.|.|.|..||||.||||||
Sbjct 642 CCGGAGAAAACTGAAGGGTGCCATCCTCACGACCATGCTTGTCTCCAGGAACTTCTCA---------------- 699
Query 962 CCGCTCCGGCCACAATGTCCACCGCGGCCTCCGGCACCACCATGGGGCTGGTGGAACAAGCCAAGAGTTTACTC 1035
||| |||||.||..||.|.
Sbjct 700 --GCT------------------------------------------------------GCCAAAAGCCTATTG 717
Query 1036 AACAAGAAAGCAGAT---GGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGC-----AGCCGCCACCAGC 1101
||||||||..|.||| ||.||||||||.||||..|| ||.|||||||||| | ||| |||||
Sbjct 718 AACAAGAAGTCGGATGGCGGTGTCAAGCCACAGAGCAA---CAACAAAAACAGT-CTCGTAAGC-----CCAGC 782
Query 1102 CCCAAAG-GGACGCTTCCTCCTG----CCGCCCTGGAGCCTCAAACCACCGTCATCCATAACCCAGTGGACGGG 1170
|| ||| |..|||..||| || |.|||.|||||||.||||||||.||..|.||.|||.|....||.|||
Sbjct 783 CC--AAGAGCCCGCGCCCT--TGCAGACGGCCATGGAGCCACAAACCACTGTGGTACACAACGCTACAGATGGG 852
Query 1171 ATTAAGGAGTCTTCTGACAG-TGCCAATACCACCATAGAGGATGAAGACGCT-AAAG----------------- 1225
||.||||..||..|.||.|| || |||.|||||||.|||.|||||.||| || ||||
Sbjct 853 ATCAAGGGCTCCACAGAGAGCTG-CAACACCACCACAGAAGATGAGGAC-CTCAAAGCTGCCCCGCTCCGCACT 924
Query 1226 ----------------------------------CCCGG----------------------------------- 1230
|||||
Sbjct 925 GGGAATGGCAGCTCGGTGCCTGAAGGACGGAGCTCCCGGGACAGAACAGCCCCCTCTGCAGGCATGCAGCCCCA 998
Query 1231 ----------------------------AAGCAGGAGATCATTAAGACCACGGAGCAGCTCATCGAGGCCGTCA 1276
||.||||||||||||||||..||.||.|||||.||.||.|||.|||
Sbjct 999 GCCTTCTCTCTGCTCCTCAGCCATGCGAAAACAGGAGATCATTAAGATTACAGAACAGCTGATTGAAGCCATCA 1072
Query 1277 ACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCTGACCTCGTTTGAGCCTGAAGCACTGGGC 1350
||||.||.|||||||||||||||.||||.||.|||||.|||||.||.||.||.|||||||||||.||.||.||.
Sbjct 1073 ACAATGGGGACTTTGAGGCCTACACGAAGATTTGTGATCCAGGCCTCACTTCCTTTGAGCCTGAGGCCCTTGGT 1146
Query 1351 AACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACCTGCTGGCCAAGAACAGCAAGCCGATCCA 1424
|||||.||.||.||||||||.|||||.|..||.|||||.|||||.||.|||.||||||||||||||||.|||||
Sbjct 1147 AACCTCGTGGAGGGGATGGATTTCCATAAGTTTTACTTTGAGAATCTCCTGTCCAAGAACAGCAAGCCTATCCA 1220
Query 1425 CACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCCGCCTGCATCGCTTACATCCGGCTCACGC 1498
.||.||||||||.|||||||||||.|||||.|||||.|||||.||.||.||||||||.||||||||.|||||.|
Sbjct 1221 TACCACCATCCTAAACCCACACGTCCACGTGATTGGGGAGGACGCAGCGTGCATCGCCTACATCCGCCTCACCC 1294
Query 1499 AGTACATTGACGGGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGAGACCCGCGTGTGGCACCGCCGCGACGGC 1572
|||||||.|||||||||||.|||||.||||||||||||||.||.||||||||.||.||||||||.||.||.|||
Sbjct 1295 AGTACATCGACGGGCAGGGTCGGCCTCGCACCAGCCAGTCAGAAGAGACCCGGGTCTGGCACCGTCGGGATGGC 1368
Query 1573 AAGTGGCAGAACGTGCACTTCCACTGCTCGGGCGCGCCTGTGGCCCCGCTGCAG 1626
|||||||..||.||.||||..||||||||.||.||.||||..||.|||||||||
Sbjct 1369 AAGTGGCTCAATGTCCACTATCACTGCTCAGGGGCCCCTGCCGCACCGCTGCAG 1422
