Nucleotide Global Alignment

Description

• Query: TRCN0000488486
• Subject: NM_001367543.1
• Aligned Length: 1684
• Identities: 1301
• Gaps: 92

Alignment

Query    1  ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT  74
            |||||||||||.|..|||||||||||.|||||||||||.||||||||||.||||||..||||||||||.|||||
Sbjct    1  ATGGCCACCACCGCCACCTGCACCCGTTTCACCGACGACTACCAGCTCTTCGAGGAGCTTGGCAAGGGTGCTTT  74

Query   75  CTCTGTGGTCCGACGCTGTGTCAAG-----CTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAA  143
            ||||||||||||..|.|||||.|||     |||  |||   .||.|||||.|||||.||.||||||||.|||||
Sbjct   75  CTCTGTGGTCCGCAGGTGTGTGAAGAAAACCTC--CAC---GCAGGAGTACGCAGCAAAAATCATCAATACCAA  143

Query  144  GAAGCTGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACA  217
            ||||.||||.|||.|.|||||||||||.||.||..|.|||||||||||.||.||.||||||||.|||.|.||||
Sbjct  144  GAAGTTGTCTGCCCGGGATCACCAGAAACTAGAACGTGAGGCTCGGATATGTCGACTTCTGAAACATCCAAACA  217

Query  218  TCGTGCGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAG  291
            |||||||.|||||.|||||.||.||.||.||.||.||.||||||||.||.||.||.||.||.||.||.||||||
Sbjct  218  TCGTGCGCCTCCATGACAGTATTTCTGAAGAAGGGTTTCACTACCTCGTGTTTGACCTTGTTACCGGCGGGGAG  291

Query  292  CTCTTTGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGA  365
            ||.|||||||||||||||||.||||||||||||||.||.||.||||||||.||||||||.||.|||||.|||||
Sbjct  292  CTGTTTGAAGACATTGTGGCCAGAGAGTACTACAGTGAAGCAGATGCCAGCCACTGTATACATCAGATTCTGGA  365

Query  366  GGCCGTTCTCCATTGTCACCA-AATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGC  438
            |...|||..|||....||||| .|| |...||||||||||.|||||.|||||.|||||||||||.|||||.||.
Sbjct  366  GAGTGTTAACCACATCCACCAGCAT-GACATCGTCCACAGGGACCTGAAGCCTGAGAACCTGCTGCTGGCGAGT  438

Query  439  AAGTGCAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATG  512
            ||.|||||.||.||.||.||.||||||||.||.||.||||||||.|||||.||.|||||.||.||||||||.||
Sbjct  439  AAATGCAAGGGTGCCGCCGTCAAGCTGGCTGATTTTGGCCTAGCCATCGAAGTACAGGGAGAGCAGCAGGCTTG  512

Query  513  GTTTGGTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGG  586
            |||||||||.||||||||.|||||.|||.||||||||||||||.|..|.|||||..|.|||||.||.|||||||
Sbjct  513  GTTTGGTTTTGCTGGCACCCCAGGTTACTTGTCCCCTGAGGTCTTGAGGAAAGATCCCTATGGAAAACCTGTGG  586

Query  587  ACATCTGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCAC  660
            |.||||||||.||.|||||.||||||||.|||||.||.||||||||.||.|||||||||||.|||||.||||||
Sbjct  587  ATATCTGGGCCTGCGGGGTCATCCTGTATATCCTCCTGGTGGGCTATCCTCCCTTCTGGGATGAGGATCAGCAC  660

Query  661  AAGCTGTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGC  734
            ||||||||.|||||||||||||||||.||||||||.|||||.||.||.||.||||||||.||.|||||||||||
Sbjct  661  AAGCTGTATCAGCAGATCAAGGCTGGAGCCTATGATTTCCCATCACCAGAATGGGACACGGTAACTCCTGAAGC  734

Query  735  CAAAAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACC  808
            |||.|||.|.||||||||||||||||||||.|||||.||.|||||||||||.||..|..||||.||.|||||||
Sbjct  735  CAAGAACTTGATCAACCAGATGCTGACCATAAACCCAGCAAAGCGCATCACGGCTGACCAGGCTCTCAAGCACC  808

Query  809  CGTGGGTCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTC  882
            ||||||||||.|||||.||||||||.||||||||||||||..|.||||||||||||||||||.||...||||||
Sbjct  809  CGTGGGTCTGTCAACGATCCACGGTGGCATCCATGATGCATCGTCAGGAGACTGTGGAGTGTTTGCGCAAGTTC  882

Query  883  AATGCCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAGTGGGCAGACA  956
            ||||||.|||||||.||.|||||.|||||||||||.||||||||.|.|.|..||||.||||||||.|||||.||
Sbjct  883  AATGCCCGGAGAAAACTGAAGGGTGCCATCCTCACGACCATGCTTGTCTCCAGGAACTTCTCAGTTGGCAGGCA  956

Query  957  GACCACCGCTCCGGCCACAATGTCCACCGCG---GCCTCCGGCACCACCATGGGGCTGGTGGAACAA---GCCA  1024
            ||.|.||||.||.|||.|   |.|..|||||   |||.|||||            ||||..|..|||   ||||
Sbjct  957  GAGCTCCGCCCCCGCCTC---GCCTGCCGCGAGCGCCGCCGGC------------CTGGCCGGGCAAGCTGCCA  1015

Query 1025  AGAGTTTACTCAACAAGAAAGCAGATGG-----------------AGTCAAGCCCCAGACG-------AAT---  1071
            |.||..||.|.||||||||..|.|||||                 ||||.||..|||| ||       |||   
Sbjct 1016  AAAGCCTATTGAACAAGAAGTCGGATGGCGGTGTCAAGAAAAGGAAGTCGAGTTCCAG-CGTGCACCTAATGCC  1088

Query 1072  -------AGCACCAAAAACAGTGC-----AGCCGCCACCAGCCCCAAAG-GGACGCTTCCTCCTG----CCGCC  1128
                   |.||.|||||||||| |     |||     |||||||  ||| |..|||..|||  ||    |.|||
Sbjct 1089  ACAGAGCAACAACAAAAACAGT-CTCGTAAGC-----CCAGCCC--AAGAGCCCGCGCCCT--TGCAGACGGCC  1152

Query 1129  CTGGAGCCTCAAACCACCGTCATCCATAACCCAGTGGACGGGATTAAGGAGTCTTCTGACAG-TGCCAATACCA  1201
            .|||||||.||||||||.||..|.||.|||.|....||.|||||.||||..||..|.||.|| || |||.||||
Sbjct 1153  ATGGAGCCACAAACCACTGTGGTACACAACGCTACAGATGGGATCAAGGGCTCCACAGAGAGCTG-CAACACCA  1225

Query 1202  CCATAGAGGATGAAGACGCT-AAAGCCCGGAAGCAGGAGATCATTAAGACCACGGAGCAGCTCATCGAGGCCGT  1274
            |||.|||.|||||.||| || ||||..||.||.||||||||||||||||..||.||.|||||.||.||.|||.|
Sbjct 1226  CCACAGAAGATGAGGAC-CTCAAAGTGCGAAAACAGGAGATCATTAAGATTACAGAACAGCTGATTGAAGCCAT  1298

Query 1275  CAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCTGACCTCGTTTGAGCCTGAAGCACTGG  1348
            ||||||.||.|||||||||||||||.||||.||.|||||.|||||.||.||.||.|||||||||||.||.||.|
Sbjct 1299  CAACAATGGGGACTTTGAGGCCTACACGAAGATTTGTGATCCAGGCCTCACTTCCTTTGAGCCTGAGGCCCTTG  1372

Query 1349  GCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACCTGCTGGCCAAGAACAGCAAGCCGATC  1422
            |.|||||.||.||.||||||||.|||||.|..||.|||||.|||||.||.|||.||||||||||||||||.|||
Sbjct 1373  GTAACCTCGTGGAGGGGATGGATTTCCATAAGTTTTACTTTGAGAATCTCCTGTCCAAGAACAGCAAGCCTATC  1446

Query 1423  CACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCCGCCTGCATCGCTTACATCCGGCTCAC  1496
            ||.||.||||||||.|||||||||||.|||||.|||||.|||||.||.||.||||||||.||||||||.|||||
Sbjct 1447  CATACCACCATCCTAAACCCACACGTCCACGTGATTGGGGAGGACGCAGCGTGCATCGCCTACATCCGCCTCAC  1520

Query 1497  GCAGTACATTGACGGGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGAGACCCGCGTGTGGCACCGCCGCGACG  1570
            .||||||||.|||||||||||.|||||.||||||||||||||.||.||||||||.||.||||||||.||.||.|
Sbjct 1521  CCAGTACATCGACGGGCAGGGTCGGCCTCGCACCAGCCAGTCAGAAGAGACCCGGGTCTGGCACCGTCGGGATG  1594

Query 1571  GCAAGTGGCAGAACGTGCACTTCCACTGCTCGGGCGCGCCTGTGGCCCCGCTGCAG  1626
            |||||||||..||.||.||||..||||||||.||.||.||||..||.|||||||||
Sbjct 1595  GCAAGTGGCTCAATGTCCACTATCACTGCTCAGGGGCCCCTGCCGCACCGCTGCAG  1650