Nucleotide Global Alignment
Description
- Query:
- TRCN0000488486
- Subject:
- NM_001367547.1
- Aligned Length:
- 1778
- Identities:
- 1270
- Gaps:
- 235
Alignment
Query 1 ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT 74
|||||||||||.|..|||||||||||.|||||||||||.||||||||||.||||||..||||||||||.|||||
Sbjct 1 ATGGCCACCACCGCCACCTGCACCCGTTTCACCGACGACTACCAGCTCTTCGAGGAGCTTGGCAAGGGTGCTTT 74
Query 75 CTCTGTGGTCCGACGCTGTGTCAAG-----CTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAA 143
||||||||||||..|.|||||.||| ||| ||| .||.|||||.|||||.||.||||||||.|||||
Sbjct 75 CTCTGTGGTCCGCAGGTGTGTGAAGAAAACCTC--CAC---GCAGGAGTACGCAGCAAAAATCATCAATACCAA 143
Query 144 GAAGCTGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACA 217
||||.||||.|||.|.|||||||||||.||.||..|.|||||||||||.||.||.||||||||.|||.|.||||
Sbjct 144 GAAGTTGTCTGCCCGGGATCACCAGAAACTAGAACGTGAGGCTCGGATATGTCGACTTCTGAAACATCCAAACA 217
Query 218 TCGTGCGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAG 291
|||||||.|||||.|||||.||.||.||.||.||.||.||||||||.||.||.||.||.||.||.||.||||||
Sbjct 218 TCGTGCGCCTCCATGACAGTATTTCTGAAGAAGGGTTTCACTACCTCGTGTTTGACCTTGTTACCGGCGGGGAG 291
Query 292 CTCTTTGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGA 365
||.|||||||||||||||||.||||||||||||||.||.||.||||||||.||||||||.||.|||||.|||||
Sbjct 292 CTGTTTGAAGACATTGTGGCCAGAGAGTACTACAGTGAAGCAGATGCCAGCCACTGTATACATCAGATTCTGGA 365
Query 366 GGCCGTTCTCCATTGTCACCA-AATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGC 438
|...|||..|||....||||| .|| |...||||||||||.|||||.|||||.|||||||||||.|||||.||.
Sbjct 366 GAGTGTTAACCACATCCACCAGCAT-GACATCGTCCACAGGGACCTGAAGCCTGAGAACCTGCTGCTGGCGAGT 438
Query 439 AAGTGCAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATG 512
||.|||||.||.||.||.||.||||||||.||.||.||||||||.|||||.||.|||||.||.||||||||.||
Sbjct 439 AAATGCAAGGGTGCCGCCGTCAAGCTGGCTGATTTTGGCCTAGCCATCGAAGTACAGGGAGAGCAGCAGGCTTG 512
Query 513 GTTTGGTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGG 586
|||||||||.||||||||.|||||.|||.||||||||||||||.|..|.|||||..|.|||||.||.|||||||
Sbjct 513 GTTTGGTTTTGCTGGCACCCCAGGTTACTTGTCCCCTGAGGTCTTGAGGAAAGATCCCTATGGAAAACCTGTGG 586
Query 587 ACATCTGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCAC 660
|.||||||||.||.|||||.||||||||.|||||.||.||||||||.||.|||||||||||.|||||.||||||
Sbjct 587 ATATCTGGGCCTGCGGGGTCATCCTGTATATCCTCCTGGTGGGCTATCCTCCCTTCTGGGATGAGGATCAGCAC 660
Query 661 AAGCTGTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGC 734
||||||||.|||||||||||||||||.||||||||.|||||.||.||.||.||||||||.||.|||||||||||
Sbjct 661 AAGCTGTATCAGCAGATCAAGGCTGGAGCCTATGATTTCCCATCACCAGAATGGGACACGGTAACTCCTGAAGC 734
Query 735 CAAAAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACC 808
|||.|||.|.||||||||||||||||||||.|||||.||.|||||||||||.||..|..||||.||.|||||||
Sbjct 735 CAAGAACTTGATCAACCAGATGCTGACCATAAACCCAGCAAAGCGCATCACGGCTGACCAGGCTCTCAAGCACC 808
Query 809 CGTGGGTCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTC 882
||||||||||.|||||.||||||||.||||||||||||||..|.||||||||||||||||||.||...||||||
Sbjct 809 CGTGGGTCTGTCAACGATCCACGGTGGCATCCATGATGCATCGTCAGGAGACTGTGGAGTGTTTGCGCAAGTTC 882
Query 883 AATGCCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAGTGGGCAGACA 956
||||||.|||||||.||.|||||.|||||||||||.||||||||.|.|.|..||||.|||||||
Sbjct 883 AATGCCCGGAGAAAACTGAAGGGTGCCATCCTCACGACCATGCTTGTCTCCAGGAACTTCTCAG---------- 946
Query 957 GACCACCGCTCCGGCCACAATGTCCACCGCGGCCTCCGGCACCACCATGGGGCTGGTGGAACAAGCCAAG---- 1026
|.||||.|| |||| .|.||||||| |||
Sbjct 947 -----------CTGCCAAAA-----------GCCT--------------------ATTGAACAAG--AAGTCGG 976
Query 1027 -----AGTTTACTCAACAAGAAAGCAGATGGAGTCAAGCCCCAGACG-------AAT----AGCACCAAAAACA 1084
.||.| ||||||| |.|.||||.||..|||| || ||| |.||.||||||||
Sbjct 977 ATGGCGGTGT------CAAGAAA----AGGAAGTCGAGTTCCAG-CGTGCACCTAATGAGCAACAACAAAAACA 1039
Query 1085 GTGC-----AGCCGCCACCAGCCCCAAAG-GGACGCTTCCTCCTG----CCGCCCTGGAGCCTCAAACCACCGT 1148
|| | ||| ||||||| ||| |..|||..||| || |.|||.|||||||.||||||||.||
Sbjct 1040 GT-CTCGTAAGC-----CCAGCCC--AAGAGCCCGCGCCCT--TGCAGACGGCCATGGAGCCACAAACCACTGT 1103
Query 1149 CATCCATAACCCAGTGGACGGGATTAAGGAGTCTTCTGACAG-TGCCAATACCACCATAGAGGATGAAGACGCT 1221
..|.||.|||.|....||.|||||.||||..||..|.||.|| || |||.|||||||.|||.|||||.||| ||
Sbjct 1104 GGTACACAACGCTACAGATGGGATCAAGGGCTCCACAGAGAGCTG-CAACACCACCACAGAAGATGAGGAC-CT 1175
Query 1222 -AAAG---------------------------------------------------CCCGG------------- 1230
|||| |||||
Sbjct 1176 CAAAGCTGCCCCGCTCCGCACTGGGAATGGCAGCTCGGTGCCTGAAGGACGGAGCTCCCGGGACAGAACAGCCC 1249
Query 1231 --------------------------------------------------AAGCAGGAGATCATTAAGACCACG 1254
||.||||||||||||||||..||.
Sbjct 1250 CCTCTGCAGGCATGCAGCCCCAGCCTTCTCTCTGCTCCTCAGCCATGCGAAAACAGGAGATCATTAAGATTACA 1323
Query 1255 GAGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCTGACCTC 1328
||.|||||.||.||.|||.|||||||.||.|||||||||||||||.||||.||.|||||.|||||.||.||.||
Sbjct 1324 GAACAGCTGATTGAAGCCATCAACAATGGGGACTTTGAGGCCTACACGAAGATTTGTGATCCAGGCCTCACTTC 1397
Query 1329 GTTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACCTGCTGG 1402
.|||||||||||.||.||.||.|||||.||.||.||||||||.|||||.|..||.|||||.|||||.||.|||.
Sbjct 1398 CTTTGAGCCTGAGGCCCTTGGTAACCTCGTGGAGGGGATGGATTTCCATAAGTTTTACTTTGAGAATCTCCTGT 1471
Query 1403 CCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCCGCCTGC 1476
||||||||||||||||.|||||.||.||||||||.|||||||||||.|||||.|||||.|||||.||.||.|||
Sbjct 1472 CCAAGAACAGCAAGCCTATCCATACCACCATCCTAAACCCACACGTCCACGTGATTGGGGAGGACGCAGCGTGC 1545
Query 1477 ATCGCTTACATCCGGCTCACGCAGTACATTGACGGGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGAGACCCG 1550
|||||.||||||||.|||||.||||||||.|||||||||||.|||||.||||||||||||||.||.||||||||
Sbjct 1546 ATCGCCTACATCCGCCTCACCCAGTACATCGACGGGCAGGGTCGGCCTCGCACCAGCCAGTCAGAAGAGACCCG 1619
Query 1551 CGTGTGGCACCGCCGCGACGGCAAGTGGCAGAACGTGCACTTCCACTGCTCGGGCGCGCCTGTGGCCCCGCTGC 1624
.||.||||||||.||.||.||||||||||..||.||.||||..||||||||.||.||.||||..||.|||||||
Sbjct 1620 GGTCTGGCACCGTCGGGATGGCAAGTGGCTCAATGTCCACTATCACTGCTCAGGGGCCCCTGCCGCACCGCTGC 1693
Query 1625 AG 1626
||
Sbjct 1694 AG 1695
