Nucleotide Global Alignment
Description
- Query:
- TRCN0000488486
- Subject:
- XM_006518495.2
- Aligned Length:
- 1758
- Identities:
- 1220
- Gaps:
- 258
Alignment
Query 1 ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT 74
|||||||||||.|..|||||||||||||||||||||||.||||||||.|.||||||..|.||||||||.||.||
Sbjct 1 ATGGCCACCACCGCCACCTGCACCCGCTTCACCGACGACTACCAGCTTTTCGAGGAGCTCGGCAAGGGTGCCTT 74
Query 75 CTCTGTGGTCCGACGCTGTGTCAAG-----CTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAA 143
|||.||||||||..|.|||||.||| .|||.| .||.||.|||||.||.||.||||||||.|||||
Sbjct 75 CTCAGTGGTCCGGAGGTGTGTAAAGAAAACATCTAC-----GCAGGAATATGCTGCAAAAATCATCAATACCAA 143
Query 144 GAAGCTGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACA 217
||||.||||.|||.|||||||.|||||.||.||..|||||||.|||||.|||||.||||||||.|||.|.||||
Sbjct 144 GAAGTTGTCCGCCCGAGATCATCAGAAACTAGAACGAGAGGCCCGGATATGCCGACTTCTGAAACATCCAAACA 217
Query 218 TCGTGCGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAG 291
|.|||||||||||.|||||.||.||.||.||.||.||.||||||||.||.||.||.||.||.||.||.||||||
Sbjct 218 TTGTGCGTCTCCATGACAGTATTTCTGAAGAAGGGTTTCACTACCTCGTGTTTGACCTTGTTACCGGAGGGGAG 291
Query 292 CTCTTTGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGA 365
.|.|||||||||||||||||.||||||||||||||.||.|||||||||||.||||||||.||.|||||||||||
Sbjct 292 TTGTTTGAAGACATTGTGGCCAGAGAGTACTACAGTGAAGCTGATGCCAGCCACTGTATACATCAGATCCTGGA 365
Query 366 GGCCGTTCTCCATTGTCACCA-AATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGC 438
|...|||..|||....||||| .|| |...||||||||.|.||.||.|||||.||||||.||||.|||||.||.
Sbjct 366 GAGTGTTAACCACATCCACCAGCAT-GACATCGTCCACCGGGATCTGAAGCCTGAGAACTTGCTGCTGGCGAGT 438
Query 439 AAGTGCAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATG 512
||.|||||.||.|||||.||.|||||.||.||.||.|||||.||.|||||.||.|||||.||.||||||||.||
Sbjct 439 AAATGCAAGGGTGCTGCGGTCAAGCTAGCTGATTTTGGCCTGGCCATCGAAGTACAGGGAGAGCAGCAGGCTTG 512
Query 513 GTTTGGTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGG 586
|||||||||.||.|||||.|||||.|||.||||||||||||||.|..|.|||||..|.|||||.||.|||||||
Sbjct 513 GTTTGGTTTTGCCGGCACCCCAGGTTACTTGTCCCCTGAGGTCTTGAGGAAAGATCCCTATGGAAAACCTGTGG 586
Query 587 ACATCTGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCAC 660
||||||||||.||.|||||.||||||||.|||||.||.|||||||||||.|||||||||||.|||||.||||||
Sbjct 587 ACATCTGGGCCTGCGGGGTCATCCTGTATATCCTCCTGGTGGGCTACCCTCCCTTCTGGGATGAGGATCAGCAC 660
Query 661 AAGCTGTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGC 734
||||||||.|||||||||||.|||||.|||||.||.|||||.||.||.||.||||||||.||||||||||||||
Sbjct 661 AAGCTGTATCAGCAGATCAAAGCTGGAGCCTACGATTTCCCATCACCAGAATGGGACACAGTCACTCCTGAAGC 734
Query 735 CAAAAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACC 808
.||.|||.|.||||||||||||||||||||.||||||||.|||||||||||.|||.|..||||.||.|||||||
Sbjct 735 TAAGAACTTGATCAACCAGATGCTGACCATAAACCCTGCAAAGCGCATCACGGCCGACCAGGCTCTCAAGCACC 808
Query 809 CGTGGGTCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCT---GAAAAAG 879
|.||||||||.|||||.||.|||||.||||||||||||||..|.||.|||||.||.||||| || |.|||
Sbjct 809 CATGGGTCTGTCAACGGTCTACGGTGGCATCCATGATGCATCGCCAAGAGACGGTAGAGTG-CTTACGCAAA-- 879
Query 880 TTCAATGCCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAGTGGGCAG 953
|||||.|||.|||||||.||.|||||.|||||||||||.||||||||.|.|.|..||||.||.|||
Sbjct 880 TTCAACGCCCGGAGAAAACTGAAGGGTGCCATCCTCACAACCATGCTTGTCTCCAGGAACTTTTCA-------- 945
Query 954 ACAGACCACCGCTCCGGCCACAATGTCCACCGCGGCCTCCGGCACCACCATGGGGCTGGTGGAACAAGCCAAGA 1027
||| |||||.|
Sbjct 946 ----------GCT------------------------------------------------------GCCAAAA 955
Query 1028 GTTTACTCAACAAGAAAGCAGAT---GGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGCAGCCGCCACC 1098
|..||.|.||||||||..||||| ||.||||| |||.||.| ||| |.
Sbjct 956 GCCTATTGAACAAGAAGTCAGATGGCGGTGTCAA---------GAAAAGGA--------AGT----------CG 1002
Query 1099 AGCCCCAAAGGGACGCTTCCTCCTGCCGCCCTGGAGCCTCAAACCACCGTCATCCATAACCCAGTG-----GAC 1167
||..||| ||.|.|.||| ..||||.||.|||||||||||..|.||||| || ||.
Sbjct 1003 AGTTCCA-------GCGTGCACCT-----AATGGAACCACAAACCACCGTGGTACATAA-----TGCTACAGAT 1059
Query 1168 GGGATTAAGGAGTCTTCTGACAG-TGCCAATACCACCATAGAGGATGAAGA-------------------CG-- 1219
|||||.||||..||..|.||.|| || .||.|||||.|.|||.||.||||| ||
Sbjct 1060 GGGATCAAGGGCTCCACAGAGAGCTG-TAACACCACTACAGAAGACGAAGATCTCAAAGCTGCCCCACTCCGCA 1132
Query 1220 ---------------------CTAAAG---------CCCGG--------------------------------- 1230
||.||| |||||
Sbjct 1133 CTGGGAATGGCAGCTTGGTGCCTGAAGGACGGAGCCCCCGGGACAGAACAGCCCCCTCTGCAGGCATGCAGCCC 1206
Query 1231 ------------------------------AAGCAGGAGATCATTAAGACCACGGAGCAGCTCATCGAGGCCGT 1274
||.||.||.||||||||||.|||.||.||.||.|||||.|||.|
Sbjct 1207 CAGCCTTCTCTCTGCTCCTCAGCCATGAGAAAACAAGAAATCATTAAGATCACAGAACAACTGATCGAAGCCAT 1280
Query 1275 CAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCTGACCTCGTTTGAGCCTGAAGCACTGG 1348
||||||.||.|||||||||||||||.||||.||.||||||||.||.||.||.||.||||||||.|||||.||.|
Sbjct 1281 CAACAATGGGGACTTTGAGGCCTACACGAAGATTTGTGACCCGGGCCTCACATCCTTTGAGCCAGAAGCCCTTG 1354
Query 1349 GCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACCTGCTGGCCAAGAACAGCAAGCCGATC 1422
|.|||||.||.|||||.|||||.|||||.|..||.|||||.|||||.||.|||.||||||||||||||||.|||
Sbjct 1355 GTAACCTCGTGGAAGGAATGGATTTCCATAAGTTTTACTTTGAGAATCTCCTGTCCAAGAACAGCAAGCCTATC 1428
Query 1423 CACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCCGCCTGCATCGCTTACATCCGGCTCAC 1496
|||||.||||||||.|||||.|||||.|||||.|||||.|||||.||.||.||||||||.||.|||||||||||
Sbjct 1429 CACACCACCATCCTAAACCCTCACGTCCACGTGATTGGGGAGGACGCAGCTTGCATCGCCTATATCCGGCTCAC 1502
Query 1497 GCAGTACATTGACGGGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGAGACCCGCGTGTGGCACCGCCGCGACG 1570
.||||||||.|||||||||||.|||||.||||||||.|||||.|||||||||||.||||||||||||||.||.|
Sbjct 1503 TCAGTACATCGACGGGCAGGGTCGGCCTCGCACCAGTCAGTCAGAGGAGACCCGGGTGTGGCACCGCCGGGATG 1576
Query 1571 GCAAGTGGCAGAACGTGCACTTCCACTGCTCGGGCGCGCCTGTGGCCCCGCTGCAG 1626
|||||||||..||.||.||||..||||||||.||.||.||||..||.|||||.|||
Sbjct 1577 GCAAGTGGCTCAATGTCCACTATCACTGCTCAGGGGCCCCTGCCGCACCGCTACAG 1632
