Nucleotide Global Alignment

Description

Query:
TRCN0000488486
Subject:
XM_017314241.1
Aligned Length:
2006
Identities:
1041
Gaps:
868

Alignment

Query    1  ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CTCTGTGGTCCGACGCTGTGTCAAGCTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAAGAAGC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACATCGTG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTCTT  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  TGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCA--GATCCTGGAGGC  368
                                                                ||..||||  ||||  .|||||
Sbjct    1  ----------------------------------------------------ATGGAGCAGGGATC--AGAGGC  20

Query  369  CGTTCTCCATTGT--CACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAA  440
            |||      ||||  ||.|          |.|||          ||.|..||||           ||       
Sbjct   21  CGT------TTGTGCCATC----------CTTCC----------CATGGTGGAG-----------GG-------  50

Query  441  GTGCAAAGGGGCTGCAGTGAAG-CTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGG  513
            |.||||||||   .||.|||.| |||.|         |||               |||||.||  ||||   |.
Sbjct   51  GCGCAAAGGG---ACACTGAGGACTGAC---------CCT---------------GGGGGCCC--CAGG---GC  92

Query  514  TTTGGTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGA  587
            |.||.|       ||.||||          |||||    .|||                              |
Sbjct   93  TATGCT-------GCTCACC----------TCCCC----ATCC------------------------------A  115

Query  588  CATCTGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACA  661
            ||           ||||||||||||||.||||||||.||||||||||||||.||||||||.||||||||.||||
Sbjct  116  CA-----------GGGGTGATCCTGTATATCCTGCTGGTGGGCTACCCACCTTTCTGGGATGAGGACCAACACA  178

Query  662  AGCTGTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCC  735
            |||||||||||||||||||||||||.||.|||||.|||||.||||||||||||||||||||.||||||||||||
Sbjct  179  AGCTGTACCAGCAGATCAAGGCTGGGGCGTATGATTTCCCATCCCCTGAGTGGGACACCGTTACTCCTGAAGCC  252

Query  736  AAAAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACCC  809
            ||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct  253  AAAAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACGGCCCATGAGGCCCTGAAGCACCC  326

Query  810  GTGGGTCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCA  883
            .||||||||||||||.|||||.||.||.||.||||||||||||||||||||||||||.||||||||.|||||||
Sbjct  327  ATGGGTCTGCCAACGTTCCACCGTGGCCTCTATGATGCACAGACAGGAGACTGTGGAATGTCTGAAGAAGTTCA  400

Query  884  ATGCCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAGTGGGCAGACAG  957
            ||||.|||||.||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct  401  ATGCAAGGAGGAAGCTCAAGGGAGCCATCCTCACCACTATGCTGGCCACACGGAATTTCTCAGTGGGCAGACAG  474

Query  958  ACCACCGCTCCGGCCACAATGTCCACCGCGGCCTCCGGCACCACCATGGGGCTGGTGGAACA---AGCCAAGAG  1028
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||
Sbjct  475  ACCACCGCTCCGGCCACAATGTCCACCGCGGCCTCCGGCACCACCATGGGGCTGGTGGAACAAGCAGCCAAGAG  548

Query 1029  TTTACTCAACAAGAAAGCAGATGGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGCAGCCGCCACCAGCC  1102
            |||||||||||||||||||||||||||||||||||||||.||.||||||||||||||..|.|||..||||||||
Sbjct  549  TTTACTCAACAAGAAAGCAGATGGAGTCAAGCCCCAGACAAACAGCACCAAAAACAGCTCGGCCATCACCAGCC  622

Query 1103  CCAAAGGGACGCTTCCTCCTGCCGCCCTGGAGCCTCAAACCACCGTCATCCATAACCCAGTGGACGGGATTAAG  1176
            |||||||..|.||.||||||||.|||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct  623  CCAAAGGATCTCTCCCTCCTGCTGCCCTGGAGCCTCAAACCACCGTTATCCATAACCCAGTGGACGGGATTAAG  696

Query 1177  GAGTCTTCTGACAGTGCCAATACCACCATAGAGGATGAAGACGCTAAAG-------------------------  1225
            ||.|||||.|||||..||||.||.|||||||||||||||||.||.||||                         
Sbjct  697  GAATCTTCCGACAGCACCAACACAACCATAGAGGATGAAGATGCCAAAGCCCCCAGGGTCCCTGATGTCCTGAG  770

Query 1226  --------------------------------------------------------------------------  1225
                                                                                      
Sbjct  771  CTTGGTGAGGAGGGCCTCAGGAGCCCCCGAAGCCGAGGGCCCCCTCTCCTGCCAATCTCCAGTTCCCATTAGCC  844

Query 1226  --------------------------------------------------------------------------  1225
                                                                                      
Sbjct  845  CCCTTCCAACCCCGTCCCCCAGGATCTCTGACATCCTGAACTCAGTGAGAAGGGGCTGTGGAACCCCAGAAGCC  918

Query 1226  --------------------------------------------------------------------------  1225
                                                                                      
Sbjct  919  GAGGGACCCCTATCAGTGGGGCCCCCACCCTGCTTGTCTCCGGGTCTCCTAGGCCCCCTGCCCACCCCGTCCCC  992

Query 1226  --------------------------------------------------------------------------  1225
                                                                                      
Sbjct  993  CAGGATCTCTGACATCCTCAACTCAGTGAGGCGGGGCTCAGGGACCCCAGAAGCTGAGGGCCTCCCACCAGTGG  1066

Query 1226  ---------------------------------------------------CCCGGAAGCAGGAGATCATTAAG  1248
                                                               |||||||||||||.|||||.|||
Sbjct 1067  GCCCCCCACCCTGCCCATCTCCGACTCTCCCTGGCCCCTTGCCCACCCCATCCCGGAAGCAGGAAATCATCAAG  1140

Query 1249  ACCACGGAGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCT  1322
            |||||.|||||||||||.||||||||||||||.||.||||||||||||||.||||||||||||||||||||.||
Sbjct 1141  ACCACAGAGCAGCTCATTGAGGCCGTCAACAATGGGGACTTTGAGGCCTATGCGAAAATCTGTGACCCAGGCCT  1214

Query 1323  GACCTCGTTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACC  1396
            ||||||.||||||||||||||.||||||||||||||.|||||||||||.|||||||||||||||||.|||||||
Sbjct 1215  GACCTCATTTGAGCCTGAAGCTCTGGGCAACCTGGTCGAAGGGATGGATTTCCACAGATTCTACTTTGAGAACC  1288

Query 1397  TGCTGGCCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCC  1470
            |||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||.||||||||.
Sbjct 1289  TGCTGGCCAAGAACAGCAAGCCGATCCACACCACCATCCTGAACCCGCACGTGCACGTCATTGGCGAGGATGCG  1362

Query 1471  GCCTGCATCGCTTACATCCGGCTCACGCAGTACATTGACGGGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGA  1544
            ||.||||||||.||||||||.|||||.||||||||.||.||.||||||.|.|||||.|||||||||||.||.||
Sbjct 1363  GCATGCATCGCCTACATCCGCCTCACACAGTACATCGATGGCCAGGGCAGACCCCGTACCAGCCAGTCCGAAGA  1436

Query 1545  GACCCGCGTGTGGCACCGCCGCGACGGCAAGTGGCAGAACGTGCACTTCCACTGCTCGGGCGCGCCTGTGGCCC  1618
            ||||||.||||||||||||||||||||||||||||||||.||.||.|||||||||||||||||.||.|||||||
Sbjct 1437  GACCCGTGTGTGGCACCGCCGCGACGGCAAGTGGCAGAATGTACATTTCCACTGCTCGGGCGCTCCAGTGGCCC  1510

Query 1619  CGCTGCAG  1626
            ||||||||
Sbjct 1511  CGCTGCAG  1518

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