Nucleotide Global Alignment
Description
- Query:
- TRCN0000488486
- Subject:
- XM_017317805.2
- Aligned Length:
- 1638
- Identities:
- 1161
- Gaps:
- 216
Alignment
Query 1 ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT 74
|||||.|||| |.|||||||||||.|||||.||.|||||||||||||..|||||..|.||.|||||.||.||
Sbjct 1 ATGGCTACCA---TCACCTGCACCCGATTCACAGAAGAGTACCAGCTCTTTGAGGAACTGGGAAAGGGAGCCTT 71
Query 75 CTCTGTGGTCCGACGCTGTGTCAAGCT-CTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAAGAAG 147
|||||||||.||..|.|||||.|||.| ||| .|.||.||.||||||||.||||||||.|||||||||||||||
Sbjct 72 CTCTGTGGTGCGCAGGTGTGTGAAGGTGCTG-GCTGGTCAGGAGTATGCTGCCAAGATTATCAACACCAAGAAG 144
Query 148 CTGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACATCGT 221
||.|||||||||||||||||||||||||||.|.|||||.||.|||||||||.|..|||||||..||||.|||||
Sbjct 145 CTTTCAGCCAGAGATCACCAGAAGCTGGAGCGTGAGGCCCGCATCTGCCGCTTGTTGAAGCACCCCAATATCGT 218
Query 222 GCGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTCT 295
.||.|||||.||||||||||||||||||||...|||||||||..|||||||||||||.|||||||||||.||.|
Sbjct 219 CCGACTCCATGACAGCATCTCCGAGGAGGGGCACCACTACCTTATCTTCGATCTGGTTACTGGTGGGGAACTGT 292
Query 296 TTGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCC 369
||||||||||||||||..|.|||||.|||||.||.|||||||||||.||||||||||||||||||.|||||||.
Sbjct 293 TTGAAGACATTGTGGCCCGGGAGTATTACAGTGAAGCTGATGCCAGCCACTGTATCCAGCAGATCTTGGAGGCT 366
Query 370 GTTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGTG 443
||.||.||.||||||||.||||||||.||.||..|.|||||.|||||.|||||.|||.|.||||||...|||..
Sbjct 367 GTGCTACACTGTCACCAGATGGGGGTGGTGCATCGTGACCTGAAGCCTGAGAATCTGTTGCTGGCCTCGAAGCT 440
Query 444 CAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTTG 517
|||.||.|||||.|||||||||||||||||.|||||.||.||.||||||.|||||||.||||||||||||||||
Sbjct 441 CAAGGGCGCTGCTGTGAAGCTGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGGAGCAGCAGGCATGGTTTG 514
Query 518 GTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACATC 591
|.|||||.||.|||||.||.|||||.|||||.||.||.||..|.||.||..||||.||.|||||.||||||.|.
Sbjct 515 GGTTCGCAGGGACACCTGGATACCTCTCCCCAGAAGTGCTGAGGAAGGACCCGTACGGGAAGCCCGTGGACCTG 588
Query 592 TGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGCT 665
|||||.|||||.||.||||||||.|||.||||.||.||.||.||.||.||||||||.||.||||||||....||
Sbjct 589 TGGGCCTGTGGCGTCATCCTGTATATCTTGCTGGTTGGGTATCCCCCGTTCTGGGATGAAGACCAGCATCGCCT 662
Query 666 GTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAAA 739
|||||||||||||||.||||||||||||||.|||||.||.||.||.||||||||||||||.||.||||||||..
Sbjct 663 GTACCAGCAGATCAAAGCTGGTGCCTATGATTTCCCATCACCAGAATGGGACACCGTCACCCCAGAAGCCAAGG 736
Query 740 ACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACCCGTGG 813
|.||.|||||..|||||||||||||||||||..||||.||||||||.|||..||||||.||.||||||||.|||
Sbjct 737 ATCTGATCAATAAGATGCTGACCATCAACCCGTCCAAACGCATCACGGCCGCTGAGGCTCTCAAGCACCCATGG 810
Query 814 GTCTGCCAACGCTCCACGGTAGCATCCATG-ATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCAATG 886
.|||..||.||||||||.||.||.||| || |||||||||||||||||.|||||.||.|||||.||||||||||
Sbjct 811 ATCTCGCACCGCTCCACCGTGGCCTCC-TGCATGCACAGACAGGAGACCGTGGACTGCCTGAAGAAGTTCAATG 883
Query 887 CCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCT-CAGTGGGCAGACAGAC 959
|||||||.||.||.||||||||||||||||||||.|||||||||||..||||.|||| |.|.|||.|||
Sbjct 884 CCAGGAGGAAACTGAAGGGAGCCATCCTCACCACTATGCTGGCCACCAGGAACTTCTCCGGAGGGAAGA----- 952
Query 960 CACCGCTCCGGCCACAATGTCCACCGCGGCCTCCGGCACCACCATGGGGCTGGTGGAACAAGCCAAGAGTTTAC 1033
|| ||.|||
Sbjct 953 ----GC---------------------------------------------GGAGGA----------------- 960
Query 1034 TCAACAAGAAAGCAGATGGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGCAGCCGCCACCAGCCCCAAA 1107
||||||| ||| ||||
Sbjct 961 --AACAAGA----AGA----------------ACGA-------------------------------------- 974
Query 1108 GGGACGCTTCCTCCTGCCGCCCTGGAGCCTCAAACCACCGTCATCCATAACCCAGTGGACGGGATTAAGGAGTC 1181
|||.| |.|||||.||
Sbjct 975 ----------------------TGGTG-------------------------------------TGAAGGAATC 989
Query 1182 TTCTGACAGTGCCAATACCACCATAGAGGATGAAGACGCTAAAGCCCGGAAGCAGGAGATCATTAAGACCACGG 1255
||||||.||..||||.||||||||.|||||.||||||.|.||||..||.||.|||||.||.||.||....||.|
Sbjct 990 TTCTGAGAGCACCAACACCACCATTGAGGACGAAGACACCAAAGTGCGCAAACAGGAAATTATCAAAGTGACAG 1063
Query 1256 AGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCTGACCTCG 1329
|||||||.|||||.|||.|.|.|||.||.|||||||||.|||||.||||.||.||.|||||.||..||||..|.
Sbjct 1064 AGCAGCTGATCGAAGCCATAAGCAATGGAGACTTTGAGTCCTACACGAAGATGTGCGACCCTGGAATGACAGCC 1137
Query 1330 TTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACCTGCTGG- 1402
|||||.||.||.||.|||||.||||||||.||.||..|||||||.||..|||||||.||.||.|||||| |||
Sbjct 1138 TTTGAACCAGAGGCCCTGGGGAACCTGGTGGAGGGCCTGGACTTTCATCGATTCTATTTTGAAAACCTG-TGGT 1210
Query 1403 CCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCCGCCTGC 1476
||..||||||||||||..|.|||||.||||||||||||||.|||.|.|||.|.||.||.||.||..|.||||||
Sbjct 1211 CCCGGAACAGCAAGCCCGTGCACACCACCATCCTGAACCCTCACATCCACCTGATGGGTGACGAGTCAGCCTGC 1284
Query 1477 ATCGCTTACATCCGGCTCACGCAGTACATTGACGGGCAGGGCCGG----CCCCGCACCAGCCAGTCTGAGGAGA 1546
|||||.||.|||||..||||.||||||.|.|| .||||| ||| ||||||||...||||||.|||||||
Sbjct 1285 ATCGCCTATATCCGCATCACTCAGTACCTGGA--TGCAGG--CGGCATACCCCGCACGGCCCAGTCAGAGGAGA 1354
Query 1547 CCCGCGTGTGGCACCGCCGCGACGGCAAGTGGCAGAACGTGCACTTCCACTG--CTCGGGCGCGCCT--GTGGC 1616
|||||||.|||||||||.|.||||||||.|||||||.|||.|||||||||.| ||.|||||| ||| ||
Sbjct 1355 CCCGCGTCTGGCACCGCAGGGACGGCAAATGGCAGATCGTCCACTTCCACAGATCTGGGGCGC-CCTCCGT--- 1424
Query 1617 CCCGCTGCAG 1626
||.||.||||
Sbjct 1425 CCTGCCGCAG 1434