Nucleotide Global Alignment

Description

• Query: TRCN0000488486
• Subject: XM_024448219.1
• Aligned Length: 1642
• Identities: 1058
• Gaps: 350

Alignment

Query    1  ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATTGGCAAGGGGGCTTT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CTCTGTGGTCCGACGCTGTGTCAAGCTCTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAAGAAGC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACATCGTG  222
                                                       .||.||.||||||||.|||.|.|||||||| 
Sbjct    1  -------------------------------------------ATGTCGACTTCTGAAACATCCAAACATCGT-  30

Query  223  CGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTCTT  296
                                                                  ||.||.||.||||||||.||
Sbjct   31  ------------------------------------------------------GTTACCGGCGGGGAGCTGTT  50

Query  297  TGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCCG  370
            |||||||||||||||.||||||||||||||.||.||.||||||||.||||||||.||.|||||.||||||...|
Sbjct   51  TGAAGACATTGTGGCCAGAGAGTACTACAGTGAAGCAGATGCCAGCCACTGTATACATCAGATTCTGGAGAGTG  124

Query  371  TTCTCCATTGTCACCA-AATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGTG  443
            ||..|||....||||| .|| |...||||||||||.|||||.|||||.|||||||||||.|||||.||.||.||
Sbjct  125  TTAACCACATCCACCAGCAT-GACATCGTCCACAGGGACCTGAAGCCTGAGAACCTGCTGCTGGCGAGTAAATG  197

Query  444  CAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTTG  517
            |||.||.||.||.||.||||||||.||.||.||||||||.|||||.||.|||||.||.||||||||.|||||||
Sbjct  198  CAAGGGTGCCGCCGTCAAGCTGGCTGATTTTGGCCTAGCCATCGAAGTACAGGGAGAGCAGCAGGCTTGGTTTG  271

Query  518  GTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACATC  591
            ||||.||||||||.|||||.|||.||||||||||||||.|..|.|||||..|.|||||.||.||||||||.|||
Sbjct  272  GTTTTGCTGGCACCCCAGGTTACTTGTCCCCTGAGGTCTTGAGGAAAGATCCCTATGGAAAACCTGTGGATATC  345

Query  592  TGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGCT  665
            |||||.||.|||||.||||||||.|||||.||.||||||||.||.|||||||||||.|||||.|||||||||||
Sbjct  346  TGGGCCTGCGGGGTCATCCTGTATATCCTCCTGGTGGGCTATCCTCCCTTCTGGGATGAGGATCAGCACAAGCT  419

Query  666  GTACCAGCAGATCAAGGCTGGTGCCTATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAAA  739
            |||.|||||||||||||||||.||||||||.|||||.||.||.||.||||||||.||.||||||||||||||.|
Sbjct  420  GTATCAGCAGATCAAGGCTGGAGCCTATGATTTCCCATCACCAGAATGGGACACGGTAACTCCTGAAGCCAAGA  493

Query  740  ACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGCCCATGAGGCCCTGAAGCACCCGTGG  813
            ||.|.||||||||||||||||||||.|||||.||.|||||||||||.||..|..||||.||.||||||||||||
Sbjct  494  ACTTGATCAACCAGATGCTGACCATAAACCCAGCAAAGCGCATCACGGCTGACCAGGCTCTCAAGCACCCGTGG  567

Query  814  GTCTGCCAACGCTCCACGGTAGCATCCATGATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCAATGC  887
            |||||.|||||.||||||||.||||||||||||||..|.||||||||||||||||||.||...|||||||||||
Sbjct  568  GTCTGTCAACGATCCACGGTGGCATCCATGATGCATCGTCAGGAGACTGTGGAGTGTTTGCGCAAGTTCAATGC  641

Query  888  CAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAGTGGGCAGACAGACCA  961
            |.|||||||.||.|||||.|||||||||||.||||||||.|.|.|..||||.||||||                
Sbjct  642  CCGGAGAAAACTGAAGGGTGCCATCCTCACGACCATGCTTGTCTCCAGGAACTTCTCA----------------  699

Query  962  CCGCTCCGGCCACAATGTCCACCGCGGCCTCCGGCACCACCATGGGGCTGGTGGAACAAGCCAAGAGTTTACTC  1035
              |||                                                      |||||.||..||.|.
Sbjct  700  --GCT------------------------------------------------------GCCAAAAGCCTATTG  717

Query 1036  AACAAGAAAGCAGAT---GGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGC-----AGCCGCCACCAGC  1101
            ||||||||..|.|||   ||.||||||||.||||..||   ||.|||||||||| |     |||     |||||
Sbjct  718  AACAAGAAGTCGGATGGCGGTGTCAAGCCACAGAGCAA---CAACAAAAACAGT-CTCGTAAGC-----CCAGC  782

Query 1102  CCCAAAG-GGACGCTTCCTCCTG----CCGCCCTGGAGCCTCAAACCACCGTCATCCATAACCCAGTGGACGGG  1170
            ||  ||| |..|||..|||  ||    |.|||.|||||||.||||||||.||..|.||.|||.|....||.|||
Sbjct  783  CC--AAGAGCCCGCGCCCT--TGCAGACGGCCATGGAGCCACAAACCACTGTGGTACACAACGCTACAGATGGG  852

Query 1171  ATTAAGGAGTCTTCTGACAG-TGCCAATACCACCATAGAGGATGAAGACGCT-AAAGCCCGGAAGCAGGAGATC  1242
            ||.||||..||..|.||.|| || |||.|||||||.|||.|||||.||| || ||||..||.||.|||||||||
Sbjct  853  ATCAAGGGCTCCACAGAGAGCTG-CAACACCACCACAGAAGATGAGGAC-CTCAAAGTGCGAAAACAGGAGATC  924

Query 1243  ATTAAGACCACGGAGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCC  1316
            |||||||..||.||.|||||.||.||.|||.|||||||.||.|||||||||||||||.||||.||.|||||.||
Sbjct  925  ATTAAGATTACAGAACAGCTGATTGAAGCCATCAACAATGGGGACTTTGAGGCCTACACGAAGATTTGTGATCC  998

Query 1317  AGGGCTGACCTCGTTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCG  1390
            |||.||.||.||.|||||||||||.||.||.||.|||||.||.||.||||||||.|||||.|..||.|||||.|
Sbjct  999  AGGCCTCACTTCCTTTGAGCCTGAGGCCCTTGGTAACCTCGTGGAGGGGATGGATTTCCATAAGTTTTACTTTG  1072

Query 1391  AGAACCTGCTGGCCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAG  1464
            ||||.||.|||.||||||||||||||||.|||||.||.||||||||.|||||||||||.|||||.|||||.|||
Sbjct 1073  AGAATCTCCTGTCCAAGAACAGCAAGCCTATCCATACCACCATCCTAAACCCACACGTCCACGTGATTGGGGAG  1146

Query 1465  GATGCCGCCTGCATCGCTTACATCCGGCTCACGCAGTACATTGACGGGCAGGGCCGGCCCCGCACCAGCCAGTC  1538
            ||.||.||.||||||||.||||||||.|||||.||||||||.|||||||||||.|||||.||||||||||||||
Sbjct 1147  GACGCAGCGTGCATCGCCTACATCCGCCTCACCCAGTACATCGACGGGCAGGGTCGGCCTCGCACCAGCCAGTC  1220

Query 1539  TGAGGAGACCCGCGTGTGGCACCGCCGCGACGGCAAGTGGCAGAACGTGCACTTCCACTGCTCGGGCGCGCCTG  1612
            .||.||||||||.||.||||||||.||.||.||||||||||..||.||.||||..||||||||.||.||.||||
Sbjct 1221  AGAAGAGACCCGGGTCTGGCACCGTCGGGATGGCAAGTGGCTCAATGTCCACTATCACTGCTCAGGGGCCCCTG  1294

Query 1613  TGGCCCCGCTGCAG  1626
            ..||.|||||||||
Sbjct 1295  CCGCACCGCTGCAG  1308