Nucleotide Global Alignment

Description

• Query: TRCN0000488510
• Subject: NM_001039181.1
• Aligned Length: 1627
• Identities: 1405
• Gaps: 26

Alignment

Query    1  ATGCCGTCTCTGCTGGTGCTCACTTTCTCCCCGTGCGTACTACTCGGCTGGGCGTTGCTGGCCGGCGGCACCGG  74
            ||||.|||..|||||.||.||||||||||..|||||||.||.||.|.|.|||.|.|||||||.||||||     
Sbjct    1  ATGCGGTCCTTGCTGCTGTTCACTTTCTCGGCGTGCGTGCTGCTGGCCCGGGTGCTGCTGGCTGGCGGC-----  69

Query   75  TGGCGGTGGCGTTGGCGGCGGCGGCGGTGG---CGCGGGCATAGGCGGCGGACGCCAGGAGAGAGAGGCGCTGC  145
              |||        .||.||||||.||| ||   |.|||.|  ||||.||.|.||||.||.|||||||||||||.
Sbjct   70  --GCG--------AGCAGCGGCGCCGG-GGACACCCGGCC--AGGCAGCAGGCGCCGGGCGAGAGAGGCGCTGG  130

Query  146  CGCCACAGAAGATCGAGGTGCTGGTGTTACTGCCCCAGGATGACTCGTACTTGTTTTCACTCACCCGGGTGCGG  219
            ||.|.||.||||||||||||||.||..||.||||||.|||.||.|||||||||||.||.||..||||||||.||
Sbjct  131  CGGCTCAAAAGATCGAGGTGCTTGTTCTATTGCCCCGGGACGATTCGTACTTGTTCTCGCTGGCCCGGGTGAGG  204

Query  220  CCGGCCATCGAGTATGCTCTGCGCAGCGTGGAGGGCAACGGGACTGGGAGGCGGCTTCTGCCGCCGGGCACTCG  293
            ||||||||||||||.||.|||||.||||||||||||||.||.||.||||||..|||.||||||||.||||||||
Sbjct  205  CCGGCCATCGAGTACGCGCTGCGTAGCGTGGAGGGCAATGGCACCGGGAGGAAGCTGCTGCCGCCAGGCACTCG  278

Query  294  CTTCCAGGTGGCTTACGAGGATTCAGACTGTGGGAACCGTGCGCTCTTCAG-CTTGGTGGACCGCGTGGCGGCG  366
            ||||||||||||.|||||.||.||.|||||.||.|||||.||||||||||| ||| ||||||||||||||||||
Sbjct  279  CTTCCAGGTGGCCTACGAAGACTCGGACTGCGGCAACCGCGCGCTCTTCAGTCTT-GTGGACCGCGTGGCGGCG  351

Query  367  GCGCGGGGCGCCAAGCCAGACCTTATCCTGGGGCCAGTGTGCGAGTATGCAGCAGCGCCAGTGGCCCGGCTTGC  440
            |||||.|||||||||||.||.||.|||||||||||.|||||||||||.||.||.|||||.|||||.|||||.||
Sbjct  352  GCGCGCGGCGCCAAGCCGGATCTCATCCTGGGGCCCGTGTGCGAGTACGCGGCGGCGCCGGTGGCTCGGCTGGC  425

Query  441  ATCGCACTGGGACCTGCCCATGCTGTCGGCTGGGGCGCTGGCCGCTGGCTTCCAGCACAAGGACTCTGAGTACT  514
            .||.||||||||||||||.||||||||.||.||.|||||||||||.||.|||||||||||||||.|.||.||||
Sbjct  426  GTCTCACTGGGACCTGCCGATGCTGTCCGCAGGAGCGCTGGCCGCCGGTTTCCAGCACAAGGACACGGAATACT  499

Query  515  CGCACCTCACGCGCGTGGCGCCCGCCTACGCCAAGATGGGCGAGATGATGCTCGCCCTGTTCCGCCACCACCAC  588
            ||||||||||||||||||||||.|||||||||||||||||.||||||||||||||.|||||.||||||||||||
Sbjct  500  CGCACCTCACGCGCGTGGCGCCTGCCTACGCCAAGATGGGAGAGATGATGCTCGCTCTGTTTCGCCACCACCAC  573

Query  589  TGGAGCCGCGCTGCACTGGTCTACAGCGACGACAAGCTGGAGCGGAACTGCTACTTCACCCTCGAGGGGGTCCA  662
            ||||||||.||.||.||||||||||||||||||||.||.|||.|||||||.||.||||||||||||||||||||
Sbjct  574  TGGAGCCGTGCAGCCCTGGTCTACAGCGACGACAAACTCGAGAGGAACTGTTATTTCACCCTCGAGGGGGTCCA  647

Query  663  CGAGGTCTTCCAGGAGGAGGGTTTGCACACGTCCATCTACAGTTTCGACGAGACCAAAGACTTGGATCTGGAAG  736
            ||||||.||.|||||||||||.|||||||||||...|||||.||||||||||||||||||||||||.|||||.|
Sbjct  648  CGAGGTTTTTCAGGAGGAGGGGTTGCACACGTCTGCCTACAATTTCGACGAGACCAAAGACTTGGACCTGGACG  721

Query  737  ACATCGTGCGCAATATCCAGGCCAGTGAGAGAGTGGTGATCATGTGTGCGAGCAGTGACACCATCCGGAGCATC  810
            ||||.||||||.|.|||||.|.|||.|||.|||||||||||||||||||.||..||||||||||.|||||.|||
Sbjct  722  ACATAGTGCGCTACATCCAAGGCAGCGAGCGAGTGGTGATCATGTGTGCCAGTGGTGACACCATTCGGAGAATC  795

Query  811  ATGCTGGTGGCGCACAGGCATGGCATGACCAGTGGAGACTACGCCTTCTTCAACATTGAGCTCTTCAACAGCTC  884
            |||.|||.||.||||||.||.|||||||||||||||||||||||.||||||||||||||.|||||||||||.||
Sbjct  796  ATGTTGGCGGTGCACAGACACGGCATGACCAGTGGAGACTACGCTTTCTTCAACATTGAACTCTTCAACAGTTC  869

Query  885  TTCCTATGGAGATGGCTCATGGAAGAGAGGAGACAAACACGACTTTGAAGCTAAGCAAGCATACTCGTCCCTCC  958
            ||||||.|||||||||||.||||.||||||||||||||||||||.|||||||||.|||||||||||||||||||
Sbjct  870  TTCCTACGGAGATGGCTCGTGGAGGAGAGGAGACAAACACGACTCTGAAGCTAAACAAGCATACTCGTCCCTCC  943

Query  959  AGACAGTCACTCTACTGAGGACAGTGAAACCTGAGTTTGAGAAGTTTTCCATGGAGGTGAAAAGTTCAGTTGAG  1032
            |.||||||||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct  944  AAACAGTCACCCTACTGAGGACCGTGAAACCTGAGTTTGAGAAGTTTTCCATGGAGGTGAAAAGTTCTGTTGAG  1017

Query 1033  AAACAAGGGCTCAATATGGAGGATTACGTTAACATGTTTGTTGAAGGATTCCACGATGCCATCCTCCTCTACGT  1106
            |||||||||||||||..||||||||||||.|||||||||||||||||.|||||.||.|||||||||||||||||
Sbjct 1018  AAACAAGGGCTCAATGAGGAGGATTACGTGAACATGTTTGTTGAAGGGTTCCATGACGCCATCCTCCTCTACGT  1091

Query 1107  CTTGGCTCTACATGAAGTACTCAGAGCTGGTTACAGCAAAAAGGATGGAGGGAAAATTATACAGCAGACTTGGA  1180
            ..|||||.||||||||||||||||||||||.||||||||.||||||||.||||||||.||.|||||||||||||
Sbjct 1092  TCTGGCTTTACATGAAGTACTCAGAGCTGGCTACAGCAAGAAGGATGGGGGGAAAATCATCCAGCAGACTTGGA  1165

Query 1181  ACAGAACATTTGAAGGTATCGCCGGGCAGGTGTCCATAGATGCCAACGGAGACCGATATGGGGATTTCTCTGTG  1254
            ||||.||||||||||||||||||||||||||||||||||||||||||||.|||||.||||||||.|||||||||
Sbjct 1166  ACAGGACATTTGAAGGTATCGCCGGGCAGGTGTCCATAGATGCCAACGGGGACCGGTATGGGGACTTCTCTGTG  1239

Query 1255  ATTGCCATGACTGATGTGGAGGCGGGCACCCAGGAGGTTATTGGTGATTATTTTGGAAAAGAAGGTCGTTTTGA  1328
            .|||||||||||||....||.||.||||||||.|||||.|||||||||||.|||||.||||||||.||.||..|
Sbjct 1240  GTTGCCATGACTGACACTGAAGCAGGCACCCAAGAGGTCATTGGTGATTACTTTGGGAAAGAAGGCCGGTTCCA  1313

Query 1329  AATGCGGCCGAATGTCAAATATCCTTGGGGCCCTTTAAAACTGAGAATAGATGAAAACCGAATTGTAGAGCATA  1402
            ||||||..||||||||||||||||||||||||||||.|||||||||.|||||||.|.|.||||.||.|||||||
Sbjct 1314  AATGCGATCGAATGTCAAATATCCTTGGGGCCCTTTGAAACTGAGACTAGATGAGACCAGAATCGTGGAGCATA  1387

Query 1403  CAAACAGCTCTCCCTGCAAATCATCAGGTGGCCTAGAAGAATCGGCAGTGACAGGAATTGTCGTGGGGGCTTTA  1476
            |.|||||||||||.||||||||||   ||||||||||||||||.||||||||||||||.||.||||||||..||
Sbjct 1388  CCAACAGCTCTCCTTGCAAATCAT---GTGGCCTAGAAGAATCTGCAGTGACAGGAATCGTTGTGGGGGCCCTA  1458

Query 1477  CTAGGAGCTGGCTTGCTAATGGCCTTCTACTTTTTCAGGAAGAAATACAGAATAACCATTGAGAGGCGAACCCA  1550
            |||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||..||
Sbjct 1459  CTAGGTGCTGGCTTGCTAATGGCCTTCTACTTTTTCAGGAAGAAATACAGAATAACCATTGAGAGGCGAAATCA  1532

Query 1551  GCAAGAAGAAAGTAACCTTGGAAAACATCGGGAATTACGGGAAGATTCCATCAGATCCCATTTTTCAGTAGCT  1623
            ||||||.|||||.|||.|.||.||.|||||.||..|.||.|||||||||||||||||.||||||||.||.|||
Sbjct 1533  GCAAGAGGAAAGCAACATCGGGAAGCATCGAGAGCTGCGAGAAGATTCCATCAGATCACATTTTTCGGTGGCT  1605