Construct: ORF TRCN0000488510

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF019235.1_s317c1
DNA Barcode:
AAGGGAAACGTAGGGATGCTCTCT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
NPR3 (4883)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000488510
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4883 NPR3 natriuretic peptide receptor 3 NM_001204375.2 100% 100%
2 human 4883 NPR3 natriuretic peptide receptor 3 NM_000908.4 99.8% 99.6% 1426_1427insCAG
3 human 4883 NPR3 natriuretic peptide receptor 3 XM_017009492.2 92.4% 92.4% 768_769ins123
4 human 4883 NPR3 natriuretic peptide receptor 3 NM_001363652.2 58.6% 52.8% (many diffs)
5 human 4883 NPR3 natriuretic peptide receptor 3 NM_001204376.1 58.4% 52.4% (many diffs)
6 human 4883 NPR3 natriuretic peptide receptor 3 XM_011514047.2 57.2% 53.3% (many diffs)
7 human 4883 NPR3 natriuretic peptide receptor 3 NM_001364458.2 54.4% 53% (many diffs)
8 human 4883 NPR3 natriuretic peptide receptor 3 XM_011514049.3 52.1% 52.1% 0_1ins777
9 human 4883 NPR3 natriuretic peptide receptor 3 NM_001364460.2 50.8% 43.1% (many diffs)
10 human 4883 NPR3 natriuretic peptide receptor 3 XM_011514050.2 49.3% 47.3% (many diffs)
11 mouse 18162 Npr3 natriuretic peptide receptor 3 NM_008728.2 86.5% 90.7% (many diffs)
12 mouse 18162 Npr3 natriuretic peptide receptor 3 NM_001039181.1 86.3% 90.3% (many diffs)
13 mouse 18162 Npr3 natriuretic peptide receptor 3 XM_006520028.2 46.7% 49.3% (many diffs)
14 mouse 18162 Npr3 natriuretic peptide receptor 3 XM_006520030.3 46.7% 49.3% (many diffs)
15 mouse 18162 Npr3 natriuretic peptide receptor 3 XM_006520031.2 46.7% 49.3% (many diffs)
16 mouse 18162 Npr3 natriuretic peptide receptor 3 XM_017316493.1 46.7% 49.3% (many diffs)
17 mouse 18162 Npr3 natriuretic peptide receptor 3 NM_001286395.1 46.5% 48.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
75
ORF end:
1698
ORF length:
1623
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcttcgc caccatgccg tctctgctgg tgctcacttt ctccccgtgc gtactactcg
121gctgggcgtt gctggccggc ggcaccggtg gcggtggcgt tggcggcggc ggcggtggcg
181cgggcatagg cggcggacgc caggagagag aggcgctgcc gccacagaag atcgaggtgc
241tggtgttact gccccaggat gactcgtact tgttttcact cacccgggtg cggccggcca
301tcgagtatgc tctgcgcagc gtggagggca acgggactgg gaggcggctt ctgccgccgg
361gcactcgctt ccaggtggct tacgaggatt cagactgtgg gaaccgtgcg ctcttcagct
421tggtggaccg cgtggcggcg gcgcggggcg ccaagccaga ccttatcctg gggccagtgt
481gcgagtatgc agcagcgcca gtggcccggc ttgcatcgca ctgggacctg cccatgctgt
541cggctggggc gctggccgct ggcttccagc acaaggactc tgagtactcg cacctcacgc
601gcgtggcgcc cgcctacgcc aagatgggcg agatgatgct cgccctgttc cgccaccacc
661actggagccg cgctgcactg gtctacagcg acgacaagct ggagcggaac tgctacttca
721ccctcgaggg ggtccacgag gtcttccagg aggagggttt gcacacgtcc atctacagtt
781tcgacgagac caaagacttg gatctggaag acatcgtgcg caatatccag gccagtgaga
841gagtggtgat catgtgtgcg agcagtgaca ccatccggag catcatgctg gtggcgcaca
901ggcatggcat gaccagtgga gactacgcct tcttcaacat tgagctcttc aacagctctt
961cctatggaga tggctcatgg aagagaggag acaaacacga ctttgaagct aagcaagcat
1021actcgtccct ccagacagtc actctactga ggacagtgaa acctgagttt gagaagtttt
1081ccatggaggt gaaaagttca gttgagaaac aagggctcaa tatggaggat tacgttaaca
1141tgtttgttga aggattccac gatgccatcc tcctctacgt cttggctcta catgaagtac
1201tcagagctgg ttacagcaaa aaggatggag ggaaaattat acagcagact tggaacagaa
1261catttgaagg tatcgccggg caggtgtcca tagatgccaa cggagaccga tatggggatt
1321tcTCTGTGAT TGCCATGACT GATGTGGAGG CGGGCACCCA GGAGGTTATT GGTGATTATT
1381TTGGAAAAGA AGGTCGTTTT GAAATGCGGC CGAATGTCAA ATATCCTTGG GGCCCTTTAA
1441AACTGAGAAT AGATGAAAAC CGAATTGTAG AGCATACAAA CAGCTCTCCC TGCAAATCAT
1501CAGGTGGCCT AGAAGAATCG GCAGTGACAG GAATTGTCGT GGGGGCTTTA CTAGGAGCTG
1561GCTTGCTAAT GGCCTTCTAC TTTTTCAGGA AGAAATACAG AATAACCATT GAGAGGCGAA
1621CCCAGCAAGA AGAAAGTAAC CTTGGAAAAC ATCGGGAATT ACGGGAAGAT TCCATCAGAT
1681CCCATTTTTC AGTAGCTGAC CCAGCTTTCT TGTACAAAGT GGTTGATATC GGTAAGCCTA
1741TCCCTAACCC TCTCCTCGGT CTCGATTCTA CGTAGTAATG AACTAGTCCG TAACTTGAAA
1801GTATTTCGAT TTCTTGGCTT TATATATCTT GTGGAAAGGA CGAAAGGGAA ACGTAGGGAT
1861GCTCTCTACG CGTTAAGTCg acaatcaacc tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)

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