Nucleotide Global Alignment

Description

Query:
TRCN0000488554
Subject:
XM_017313219.1
Aligned Length:
1569
Identities:
1052
Gaps:
411

Alignment

Query    1  ATGGAGTCAGCTCCGGCAGCCCCCGACCCCGCCGCCAGCGAGCCAGGCAGCAGCGGCGCGGACGCGGCCGCCGG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CTCCAGGGAGACCCCGCTGAACCAGGAATCCGCCCGCAAGAGCGAGCCGCCTGCCCCGGTGCGCAGACAGAGCT  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ATTCCAGCACCAGCAGAGGTATCTCAGTAACGAAGAAGACACATACATCTCAAATTGAAATTATTCCATGCAAG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  ATCTGTGGAGACAAATCATCAGGAATCCATTATGGTGTCATTACATGTGAAGGCTGCAAGGGCTTTTTCAGGAG  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  AAGTCAGCAAAGCAATGCCACCTACTCCTGTCCTCGTCAGAAGAACTGTTTGATTGATCGAACCAGTAGAAACC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  GCTGCCAACACTGTCGATTACAGAAATGCCTTGCCGTAGGGATGTCTCGAGATGCTGTAAAATTTGGCCGAATG  444
                                                     |||||||||||||||||.||.|||||.||.|||
Sbjct    1  -----------------------------------------ATGTCTCGAGATGCTGTCAAGTTTGGTCGGATG  33

Query  445  TCAAAAAAGCAGAGAGACAGCTTGTATGCAGAAGTACAGAAACACCGGATGCAGCAGCAGCAGCGCGACCACCA  518
            ||.||.||||||||||||||||||||.||.||.||.|||||.|||||||||||||||||||||||.||||||||
Sbjct   34  TCCAAGAAGCAGAGAGACAGCTTGTACGCCGAGGTGCAGAAGCACCGGATGCAGCAGCAGCAGCGAGACCACCA  107

Query  519  GCAGCAGCCTGGAGAGGCTGAGCCGCTGACGCCCACCTACAACATCTCGGCCAACGGGCTGACGGAACTTCACG  592
            ||||||||||||.|||||.|||||||||||||||||||||||||||||.|||||.||||||||||||||.||.|
Sbjct  108  GCAGCAGCCTGGGGAGGCGGAGCCGCTGACGCCCACCTACAACATCTCAGCCAATGGGCTGACGGAACTGCATG  181

Query  593  ACGACCTCAGTAACTACATTGACGGGCACACCCCTGAGGGGAGTAAGGCAGACTCCGCCGTCAGCAGCTTCTAC  666
            |.||||||||.|.|||.||.||.|||||||||||.|||||.||.|||||.|||||.||||||||||||||||||
Sbjct  182  ATGACCTCAGCACCTATATGGATGGGCACACCCCCGAGGGCAGCAAGGCCGACTCAGCCGTCAGCAGCTTCTAC  255

Query  667  CTGGACATACAGCCTTCCCCAGACCAGTCAGGTCTTGATATCAATGGAATCAAACCAGAACCAATATGTGACTA  740
            ||||||||.|||||.||||||||||||||.||..|.||.||||||||.||||||||.|||||.|||||||||||
Sbjct  256  CTGGACATCCAGCCCTCCCCAGACCAGTCGGGATTGGACATCAATGGGATCAAACCCGAACCCATATGTGACTA  329

Query  741  CACACCAGCATCAGGCTTCTTTCCCTACTGTTCGTTCACCAACGGCGAGACTTCCCCAACTGTGTCCATGGCAG  814
            ||||||||||||.||||||||.|||||||||||.|||||||||||.||||||||||||||.|||||||||||||
Sbjct  330  CACACCAGCATCTGGCTTCTTCCCCTACTGTTCCTTCACCAACGGAGAGACTTCCCCAACCGTGTCCATGGCAG  403

Query  815  AATTAGAACACCTTGCACAGAATATATCTAAATCGCATCTGGAAACCTGCCAATACTTGAGAGAAGAGCTCCAG  888
            ||.|||||||||||||.|||||.|||||.|||||.||.||||||||||||||.||||||.|.||||||||||||
Sbjct  404  AACTAGAACACCTTGCCCAGAACATATCCAAATCCCACCTGGAAACCTGCCAGTACTTGCGGGAAGAGCTCCAG  477

Query  889  CAGATAACGTGGCAGACCTTTTTACAGGAAGAAATTGAGAACTATCAAAACAAGCAGCGGGAGGTGATGTGGCA  962
            ||||||||||||||||||||..|.|||||.||.|||||.|||||.||.|||||||||.|.||||||||||||||
Sbjct  478  CAGATAACGTGGCAGACCTTCCTGCAGGAGGAGATTGAAAACTACCAGAACAAGCAGAGAGAGGTGATGTGGCA  551

Query  963  ATTGTGTGCCATCAAAATTACAGAAGCTATACAGTATGTGGTGGAGTTTGCCAAACGCATTGATGGATTTATGG  1036
            ..|||||||||||||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct  552  GCTGTGTGCCATCAAGATTACAGAAGCTATCCAGTATGTGGTGGAGTTTGCCAAACGCATTGATGGATTTATGG  625

Query 1037  AACTGTGTCAAAATGATCAAATTGTGCTTCTAAAAGCAGGTTCTCTAGAGGTGGTGTTTATCAGAATGTGCCGT  1110
            |.||||||||||||||||||||||||||||||||||||||.||.|||||||||||||||||.||.|||||||||
Sbjct  626  AGCTGTGTCAAAATGATCAAATTGTGCTTCTAAAAGCAGGCTCGCTAGAGGTGGTGTTTATTAGGATGTGCCGT  699

Query 1111  GCCTTTGACTCTCAGAACAACACCGTGTACTTTGATGGGAAGTATGCCAGCCCCGACGTCTTCAAATCCTTAGG  1184
            |||||||||||||||||||||||||||||||||||.|||||||||||.||||||||.||||||||.|||.||||
Sbjct  700  GCCTTTGACTCTCAGAACAACACCGTGTACTTTGACGGGAAGTATGCGAGCCCCGATGTCTTCAAGTCCCTAGG  773

Query 1185  TTGTGAAGACTTTATTAGCTTTGTGTTTGAATTTGGAAAGAGTTTATGTTCTATGCACCTGACTGAAGATGAAA  1258
            ||||||||||||.||.||||||||||||||||||||.||||||||.|||||||||||||||||.|||||.||||
Sbjct  774  TTGTGAAGACTTCATCAGCTTTGTGTTTGAATTTGGGAAGAGTTTGTGTTCTATGCACCTGACCGAAGACGAAA  847

Query 1259  TTGCATTATTTTCTGCATTTGTACTGATGTCAGCAGATCGCTCATGGCTGCAAGAAAAGGTAAAAATTGAAAAA  1332
            |.||.||||||||||||||.||||||||||||||.||||||||.|||||.||.||||||||||||||.|||||.
Sbjct  848  TCGCGTTATTTTCTGCATTCGTACTGATGTCAGCGGATCGCTCGTGGCTTCAGGAAAAGGTAAAAATAGAAAAG  921

Query 1333  CTGCAACAGAAAATTCAGCTAGCTCTTCAACACGTCCTACAGAAGAATCACCGAGAAGATGGAATACTAACAAA  1406
            ||||||||||||||||||||.||.|||||.|||||||||||||||||.|||||||||||||||||.|||||.||
Sbjct  922  CTGCAACAGAAAATTCAGCTGGCCCTTCAGCACGTCCTACAGAAGAACCACCGAGAAGATGGAATTCTAACCAA  995

Query 1407  GTTAATATGCAAGGTGTCTACATTAAGAGCCTTATGTGGACGACATACAGAAAAGCTAATGGCATTTAAAGCAA  1480
            |.|||||||||||||||||||.|||||||||.||||||||||||||||.|||||||||||||||||||||||||
Sbjct  996  GCTAATATGCAAGGTGTCTACGTTAAGAGCCCTATGTGGACGACATACGGAAAAGCTAATGGCATTTAAAGCAA  1069

Query 1481  TATACCCAGACATTGTGCGACTTCATTTTCCTCCATTATACAAGGAGTTGTTCACTTCAGAATTTGAGCCAGCA  1554
            ||||||||||||||||||||||.|||||||||||||||||||||||.||||||||||||||||||||||||||.
Sbjct 1070  TATACCCAGACATTGTGCGACTCCATTTTCCTCCATTATACAAGGAATTGTTCACTTCAGAATTTGAGCCAGCC  1143

Query 1555  ATGCAAATTGATGGG  1569
            ||||||||.||||||
Sbjct 1144  ATGCAAATCGATGGG  1158

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