Nucleotide Global Alignment
Description
- Query:
- TRCN0000488577
- Subject:
- XR_871695.2
- Aligned Length:
- 3246
- Identities:
- 610
- Gaps:
- 2580
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCCCGCCCCGCTCGCGCGCCTGAGGGCGGGCCTCCGGTCACATGACGGCTGCGCAGGTGAGCACCGCTTCCGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCGGGCTTCGGAGTCGCGGCTAGCTCCCGCTTCCACTCGCTCGGGTGCGCGGGAGACTATGGCGTCCTCCTCCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCCTCCCGCCACCGCACCCGCGGCAGCTGGAGGCCCCGGCCCGGGATTCGGCTTCGCCTCCAAAACCAAGAAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAGCATTTCGTACAGCAGAAAGTGAAGGTGTTCCGGGCCGCGGACCCGCTGGTGGGCGTGTTCCTGTGGGGCGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGCTCACTCGGTCCAGCCCCAGGCTACAGGGACTGGCCAGGATCCGGCTGCAGCCAGAGGGACATTAAGGGGAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGCTCTGAAGGGTTATTGATCAATGAGCTCAGCCAGGTACCGCCCCCAGTGATGTTGCTGCCAGATGACTTTA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGCCAGCTCCAAGATCAAGGTCAACAATCACTTTTTCCATAGAGAAAATCTTCCCAGTCATTTCAAGTTCAAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAGTATTGTCCCCAGGTCTTCAGGAACCTGAGAGATCGGTTTGCCATCGATGATCACGATTACTTGGTGTCCCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TACTCGAAGCCCCCCAAGCGAAACTGAAGGCAGTGATGGCCGTTTCCTTATCTCCTATGACCGCACTCTGGTCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCAAGGAAGTGTCGAGCGAAGATATTGCGGATATGCACAGCAACCTCTCCAACTACCACCAGTACATAGTGAAA 740
Query 1 ------------------------------------------------------------------------AT 2
||
Sbjct 741 TGTCATGGCAACACGCTTCTGCCCCAGTTCCTGGGCATGTACCGAGTCAGTGTAGAAAATGAAGACAGCTACAT 814
Query 3 GCTTGTGATGCGCAATATGTTTAGCCACCGTCTTCCTGTGCACAGGAAGTATGACCTCAAGGGTTCCCTAGTGT 76
|||.||||||||||||||||||||.||.||||||||||||||.||||||||||||||||||||.||.|||||||
Sbjct 815 GCTCGTGATGCGCAATATGTTTAGTCATCGTCTTCCTGTGCATAGGAAGTATGACCTCAAGGGCTCTCTAGTGT 888
Query 77 CCCGGGAAGCCAGCGATAAGGAAAAGGTTAAAGAATTGCCCACCCTTAAGGATATGGACTTTCTCAACAAGAAC 150
|||||||||||||||||||||||||||||||||||.||||.||.||.|||||||||||||||||.|||||||||
Sbjct 889 CCCGGGAAGCCAGCGATAAGGAAAAGGTTAAAGAACTGCCAACACTAAAGGATATGGACTTTCTTAACAAGAAC 962
Query 151 CAGAAAGTATATATTGGTGAAGAGGAGAAGAAAATATTTCTGGAGAAGCTGAAGAGAGATGTGGAGTTTCTAGT 224
||||||||.||||||||||||||.||.||||||.||||.|||||||||||||||.|||||||||||||||||||
Sbjct 963 CAGAAAGTGTATATTGGTGAAGAAGAAAAGAAAGTATTCCTGGAGAAGCTGAAGCGAGATGTGGAGTTTCTAGT 1036
Query 225 GCAGCTGAAGATCATGGACTACAGCCTTCTGCTAGGCATCCACGACATCATTCGGGGCTCTGAACCAGAGGAGG 298
|||||||||||||||||||||||||||.|||.|.|||||||||||||||||.||||||||||||||.|||||.|
Sbjct 1037 GCAGCTGAAGATCATGGACTACAGCCTCCTGTTGGGCATCCACGACATCATCCGGGGCTCTGAACCCGAGGAAG 1110
Query 299 AAGCGCCCGTGCGGGAGGATGAGTCAGAGGTGGATGGGGACTGCAGCCTGACTGGACCTCCTGCTCTGGTGGGC 372
|.|.|||.|||.|||||||.|||||.|||..||||||||||||.|.||||.||||||||||.||.|||||||||
Sbjct 1111 AGGGGCCTGTGAGGGAGGAGGAGTCTGAGTGGGATGGGGACTGTAACCTGGCTGGACCTCCCGCCCTGGTGGGC 1184
Query 373 TCCTATGGCACCTCCCCAGAGGGTATCGGAGGCTACATCCATTCCCATCGGCCCCTGGGCCCAGGAGAGTTTGA 446
||||||||.||||||||.|||||||||||||||||||||||||||||.|||||.||||||||||||||||||||
Sbjct 1185 TCCTATGGTACCTCCCCTGAGGGTATCGGAGGCTACATCCATTCCCACCGGCCACTGGGCCCAGGAGAGTTTGA 1258
Query 447 GTCCTTCATTGATGTCTATGCCATCCGGAGTGCTGAAGGAGCCCCCCAGAAGGAGGTCTACTTCATGGGCCTCA 520
|||||||||.|||||||||||.|||||||||||.||.||.|||||||||||||||||.||.|||||||||||||
Sbjct 1259 GTCCTTCATCGATGTCTATGCTATCCGGAGTGCGGAGGGGGCCCCCCAGAAGGAGGTGTATTTCATGGGCCTCA 1332
Query 521 TTGATATCCTTACACAGTATGATGCCAAGAAGAAAGCAGCTCATGCAGCCAAAACTGTCAAGCA---------- 584
||||.||.||.|||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 1333 TTGACATTCTGACACAGTATGATGCCAAGAAGAAAGCAGCTCATGCAGCCAAGACTGTCAAGCACGGGGTGAGG 1406
Query 585 ------------------------------------------------------TGGGGCTGGGGCAGAGATCT 604
||||||.|||||||||||||
Sbjct 1407 GTTCCCCACAGCCTTTCCTCTCCTGGCCTGACTGTTCTCTGGAAAGAACGCTTCTGGGGCGGGGGCAGAGATCT 1480
Query 605 CTACTGTCCATCCGGAGCAGTATGCTAAGCGATTCCTGGATTTTATTACCAACATCTTTGCC------------ 666
|.|||||||||||.||||||||||||||||||||||||||.||||||.||||||||||||||
Sbjct 1481 CCACTGTCCATCCTGAGCAGTATGCTAAGCGATTCCTGGACTTTATTGCCAACATCTTTGCCTAAGAGGCTGCC 1554
Query 667 -------------------------------------------------------------------------- 666
Sbjct 1555 TGACTCCAGGGAGGAGCTGGGGGAGGGGTTGTTTGCCATCTTCGGGACCTGACTGAACAGTGGACTTGGCTCAA 1628
Query 667 -------------------------------------------------------------------------- 666
Sbjct 1629 GCAACTGCCTGGATGCACTTTTGCTGAGTGGAAGAAACTGAATGTCTGGATTTTGCTGATACTTTTATGGGGCA 1702
Query 667 -------------------------------------------------------------------------- 666
Sbjct 1703 CTTTGTGGCATGCTTCCTCCCTGGTAAGCCCTGGAATGGAGGGCTTTCAGGATGCTCCAGATGTGGGTGCAGGC 1776
Query 667 -------------------------------------------------------------------------- 666
Sbjct 1777 ATTCACACATGGACAGTCTGGCCTGGAGGTCAGGTGGGGAGTGGTCAGCAGGCTGGCACCTCACAAGGCAGGAC 1850
Query 667 -------------------------------------------------------------------------- 666
Sbjct 1851 CTAAGCCTAAGCGGACTTTTGTGACTATGCAGATGATGGAGAAGGTCCCTGTGGAGCAACGACTGTTCCCGACT 1924
Query 667 -------------------------------------------------------------------------- 666
Sbjct 1925 GTTCCCGTTCTCCCACCCCACCCCACCCCACGTCCACCTCTTTCTGTGAGCACTTTGGGTGCAGGAGCCCAGAG 1998
Query 667 -------------------------------------------------------------------------- 666
Sbjct 1999 GCTAGCGGTGCCCGAGCTTAGGTGCAGGTGTGAGACTCGGGCTGCTCTTCCCACAACCCTGTGCCTTGCTGGTG 2072
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2073 AGCAGGGAGAGCAGTAGAGGCCGGGACAGGTCGGAGTGCAGGGTTCATTGCCTGGGTGACACCCTTTCTTCCTG 2146
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2147 TCTCACTACTCCTGGGCTTCTTTCTAGCAGAGGGGAACAGTACCATCTCCATAATTTGGGGAGGATAGAGCTCT 2220
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2221 CGAGTGAAGGAGCCTCCGCATCCCTGGGGCATGTGTACCTAGAACTCCCCCTCCTTCTCAAAACCCTTTCTGGT 2294
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2295 TGGAGTTGTTATTCTGTCCCATCTTCCACTGCTAATGTGTCTCCCAGGGGACAGATGGCCTTCTTTGTCATCTC 2368
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2369 CCCTCTCCGCCCCCAGAGAGGAGTCAGAGCCATAACTCAATCCACCCAGTCCTCTCCAAAGACAGCTGAATATT 2442
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2443 AATGCACGCCATCCTCAGAATGGAGAGGACCTGCTAGGCATCTTAGCTCTCCCAGCTCGTGCCTGTAAAGCCAG 2516
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2517 CACTCAGGAGGCTCTGAGAGTTCAAGTCCAGCCTGGGCTACTGAGTGAGACCTGGTCTCAGGAACACTCCAAAT 2590
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2591 AGGTTTGGGTTTGAGCGCTGGAGATCATAGCTGAGTTGGTAGTGTGCTTGCCTAGCATGTACAAAGCTCTGGGA 2664
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2665 TCCACCCCCAGCACCACTTAAGCCAGGCGTGGCGGTGCACGCCTGCACTCCTGGCCCTGGGAAGTAGTGGTAAG 2738
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2739 CAGGATGGGGCATTCAAGGTCATCGCCAGTTAGTTACTTGACGAGGTTGAGGCCAGCCAAGGAAACAGGAGACC 2812
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2813 ATCTTGGGGAAAATGATTCTAAGGAGAGATAGATTGTCTTTGTCTCTGCCTAAAGCCTTTGGAAGCAAGCCACT 2886
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2887 CATCTTCGCTGTTTGGCGCTCTGGAGGTGGGGTGGGCATTGAAGGCAAGGAGCTGCTTTGCTGTGTGTCCATGA 2960
Query 667 -------------------------------------------------------------------------- 666
Sbjct 2961 GGTCCTCAGGGAGAAGCCCACCTCCCTCACCAAAGGAAGCAGCAAGATGGGTGCCCGGTTGGGGTGGGTGGGAC 3034
Query 667 -------------------------------------------------------------------------- 666
Sbjct 3035 CTGCTGAGTCTCCCATCCCTCAAGCAACCTTTCCCCTGTTGAATGCAATAAGTGACTCCGGTCCCTTAACAACT 3108
Query 667 -------------------------------------------------------------------------- 666
Sbjct 3109 GGGGTCTCACCGTGCGGCTGTGGTCGTGGGCAGTGTTGCCATCTTCACTTACTGCTTCCGTTTTCCATCTGTTT 3182
Query 667 ---------------------------------------------------------------- 666
Sbjct 3183 TGTTAATAAAATATGTATATTTACTCCCGATATCACAATAAAATAAATTATTTGATCTAAGTCA 3246
