Nucleotide Global Alignment

Description

Query:
TRCN0000488599
Subject:
XM_006500209.3
Aligned Length:
2637
Identities:
2297
Gaps:
31

Alignment

Query    1  ATGGGCCCCCCGAGCCTCGTGCTGTGCTTGCTGTCCGCAACTGTGTTCTCCCTGCTGGGTGGAAGCTCGGCCTT  74
            ||||..|||||..||||....||.||..||||||||.|..||.|..||||||||||||.|||.|||||||||||
Sbjct    1  ATGGCACCCCCTGGCCTGCCACTATGGCTGCTGTCCACCGCTCTCCTCTCCCTGCTGGCTGGCAGCTCGGCCTT  74

Query   75  CCTGTCGCACCACCGCCTGAAAGGCAGGTTTCAGAGGGACCGCAGGAACATCCGCCCCAACATCATCCTGGTGC  148
            |||.||.||.|.|||||||||.||..|.||.|||||||||||||||||||||||.||||||||||||.||||||
Sbjct   75  CCTCTCCCATCCCCGCCTGAAGGGACGCTTCCAGAGGGACCGCAGGAACATCCGGCCCAACATCATCTTGGTGC  148

Query  149  TGACGGACGACCAGGATGTGGAGCTGGGTTCCATGCAGGTGATGAACAAGACCCGGCGCATCATGGAGCAGGGC  222
            |.|||||.||||||||||||||||||||.||||||||.||||||||||||||..||||.|||||||||||||||
Sbjct  149  TTACGGATGACCAGGATGTGGAGCTGGGCTCCATGCAAGTGATGAACAAGACAAGGCGTATCATGGAGCAGGGC  222

Query  223  GGGGCGCACTTCATCAACGCCTTCGTGACCACACCCATGTGCTGCCCCTCACGCTCCTCCATCCTCACCGGCAA  296
            |||||||||||||||||.|||||||||||.|||||.||||||||.||.||.|||||||||||.|||||||||||
Sbjct  223  GGGGCGCACTTCATCAATGCCTTCGTGACTACACCAATGTGCTGTCCGTCTCGCTCCTCCATTCTCACCGGCAA  296

Query  297  GTACGTCCACAACCACAACACCTACACCAACAATGAGAACTGCTCCTCGCCCTCCTGGCAGGCACAGCACGAGA  370
            |||||||||||||||||||||||||||||||||||||||.||.||||||||||||||||||||.||||||||||
Sbjct  297  GTACGTCCACAACCACAACACCTACACCAACAATGAGAATTGTTCCTCGCCCTCCTGGCAGGCCCAGCACGAGA  370

Query  371  GCCGCACCTTTGCCGTGTACCTCAATAGCACTGGCTACCGGACAGCTTTCTTCGGGAAGTATCTTAATGAATAC  444
            ||||||||||.||||||||.|||||.|||||.|||||||||||||||||||||||.||.||.||.|||||.|||
Sbjct  371  GCCGCACCTTCGCCGTGTATCTCAACAGCACAGGCTACCGGACAGCTTTCTTCGGAAAATACCTCAATGAGTAC  444

Query  445  AACGGCTCCTACGTGCCACCCGGCTGGAAGGAGTGGGTCGGACTCCTTAAAAACTCCCGCTTTTATAACTACAC  518
            ||||||||.||||||||.|||||||||||||||||||||||.||.|||||.|||||||||||||||||||||||
Sbjct  445  AACGGCTCATACGTGCCGCCCGGCTGGAAGGAGTGGGTCGGCCTACTTAAGAACTCCCGCTTTTATAACTACAC  518

Query  519  GCTGTGTCGGAACGGGGTGAAAGAGAAGCACGGCTCCGACTACTCCAAGGATTACCTCACAGACCTCATCACCA  592
            .||.||.|||||.||||||||.|||||.||.|||||.||||||||||.||||||||||||.||.||||||||||
Sbjct  519  ACTCTGCCGGAATGGGGTGAAGGAGAAACATGGCTCAGACTACTCCACGGATTACCTCACGGATCTCATCACCA  592

Query  593  ATGACAGCGTGAGCTTCTTCCGCACGTCCAAGAAGATGTACCCGCACAGGCCAGTCCTCATGGTCATCAGCCAT  666
            |||||||.||||||||||||||.||.|||||||||||||||||.||||||||.||.|||||||||||||||||.
Sbjct  593  ATGACAGTGTGAGCTTCTTCCGAACATCCAAGAAGATGTACCCACACAGGCCCGTGCTCATGGTCATCAGCCAC  666

Query  667  GCAGCCCCCCACGGCCCTGAGGATTCAGCCCCACAATATTCACGCCTCTTCCCAAACGCATCTCAGCACATCAC  740
            ||.||.|||||.|||||.|||||.|||||.||.||.||.|||||.||||||||.||.||.||.|||||||||||
Sbjct  667  GCGGCTCCCCATGGCCCCGAGGACTCAGCACCCCAGTACTCACGGCTCTTCCCCAATGCGTCCCAGCACATCAC  740

Query  741  GCCGAGCTACAACTACGCGCCCAACCCGGACAAACACTGGATCATGCGCTACACGGGGCCCATGAAGCCCATCC  814
            .|||||.||||||||.||.||||||||.|||||.||.||||||||||||||||||||.||||||||||||||.|
Sbjct  741  ACCGAGTTACAACTATGCACCCAACCCAGACAAGCATTGGATCATGCGCTACACGGGACCCATGAAGCCCATTC  814

Query  815  ACATGGAATTCACCAACATGCTCCAGCGGAAGCGCTTGCAGACCCTCATGTCGGTGGACGACTCCATGGAGACG  888
            ||||||||||||||||||||||.||.||.||.|||.|.||||||||||||||.|||||.|||||||||||||||
Sbjct  815  ACATGGAATTCACCAACATGCTACAACGAAAACGCCTACAGACCCTCATGTCTGTGGATGACTCCATGGAGACG  888

Query  889  ATTTACAACATGCTGGTTGAGACGGGCGAGCTGGACAACACGTACATCGTATACACCGCCGACCACGGTTACCA  962
            ||.||..||||||||||.||||||||.|||||||||||||||||||||.|.|||||||||||||||||.|||||
Sbjct  889  ATCTATGACATGCTGGTGGAGACGGGGGAGCTGGACAACACGTACATCCTGTACACCGCCGACCACGGCTACCA  962

Query  963  CATCGGCCAGTTTGGCCTGGTGAAAGGGAAATCCATGCCATATGAGTTTGACATCAGGGTCCCGTTCTACGTGA  1036
            |||.|||||||||||.||||||||.||.||.||.|||||.|||||.||.||||||||.||||||||||||||||
Sbjct  963  CATTGGCCAGTTTGGGCTGGTGAAGGGCAAGTCTATGCCGTATGAATTCGACATCAGAGTCCCGTTCTACGTGA  1036

Query 1037  GGGGCCCCAACGTGGAAGCCGGCTGTCTGAATCCCCACATCGTCCTCAACATTGACCTGGCCCCCACCATCCTG  1110
            |||||||||||||||||||.||||.||||||.||||||||.|||||||||||||||||||||||||||||.|||
Sbjct 1037  GGGGCCCCAACGTGGAAGCTGGCTCTCTGAACCCCCACATTGTCCTCAACATTGACCTGGCCCCCACCATACTG  1110

Query 1111  GACATTGCAGGCCTGGACATACCTGCGGATATGGACGGGAAATCCATCCTCAAGCTGCTGGACACGGAGCGGCC  1184
            ||.||.||.||.||||||||.|||||.||.|||||||||||.||.||.|||||.||.||||||.|.||||||||
Sbjct 1111  GATATCGCTGGACTGGACATCCCTGCAGACATGGACGGGAAGTCTATTCTCAAACTACTGGACTCAGAGCGGCC  1184

Query 1185  GGTGAATCGGTTTCACTTGAAAAAGAAGATGAGGGTCTGGCGGGACTCCTTCTTGGTGGAGAGAGGCAAGCTGC  1258
            .|||||.|||||.|||||||||||||||.|||||||||||||.|||||||||.||||||||||||||||.||||
Sbjct 1185  AGTGAACCGGTTCCACTTGAAAAAGAAGCTGAGGGTCTGGCGAGACTCCTTCCTGGTGGAGAGAGGCAAACTGC  1258

Query 1259  TACACAAGAGAGACAATGACAAGGTGGACGCCCAGGAGGAGAACTTTCTGCCCAAGTACCAGCGTGTGAAGGAC  1332
            |.||||||||.||...||||||.|||.|.|||||||||||||||||.|||||||||||||||||.|||||||||
Sbjct 1259  TCCACAAGAGGGAGGGTGACAAAGTGAATGCCCAGGAGGAGAACTTCCTGCCCAAGTACCAGCGCGTGAAGGAC  1332

Query 1333  CTGTGTCAGCGTGCTGAGTACCAGACGGCGTGTGAGCAGCTGGGACAGAAGTGGCAGTGTGTGGAGGACGCCAC  1406
            |||||||||||.||||||||||||||.||.||.||.||||||||.||||||||||||||||||||||||||..|
Sbjct 1333  CTGTGTCAGCGAGCTGAGTACCAGACAGCATGCGAACAGCTGGGGCAGAAGTGGCAGTGTGTGGAGGACGCTTC  1406

Query 1407  GGGGAAGCTGAAGCTGCATAAGTGCAAGGGCCCCATGCGGCT---------GGGCGGCAGCAGAGCCCTCTCCA  1471
            .||||.||||||||||||.||.||.||.||||||||||||.|         .||.|||||||||||||||||||
Sbjct 1407  TGGGACGCTGAAGCTGCACAAATGTAAAGGCCCCATGCGGTTTGGTGGCGGCGGTGGCAGCAGAGCCCTCTCCA  1480

Query 1472  ACCTCGTGCCCAAGTACTACGGGCAGGGCAGCGAGGCCTGCACCTGTGACA---------GCGGGGACTACAAG  1536
            ||||.|||||||||||..||||.|||.|||||||||||||||.||||||||         |.|||||||||||.
Sbjct 1481  ACCTGGTGCCCAAGTATGACGGCCAGAGCAGCGAGGCCTGCAGCTGTGACAGTGGCGGTGGAGGGGACTACAAA  1554

Query 1537  CTCAGCCTGGCCGGACGCCGGAAAAAACTCTTCAAGAAGAAGTACAAGGCCAGCTATGTCCGCAGTCGCTCCAT  1610
            ||..|||||||.||||||||   .||.|||||.|||||.|||||.|||.|||||||||.|||.|..||||||||
Sbjct 1555  CTGGGCCTGGCTGGACGCCG---TAAGCTCTTTAAGAAAAAGTATAAGACCAGCTATGCCCGGAACCGCTCCAT  1625

Query 1611  CCGCTCAGTGGCCATCGAGGTGGACGGCAGGGTGTACCACGTAGGCCTGGGTGATGCCGCC-CAGCCCCGAAAC  1683
            |||.||.||||||||||||||||||||...|.|.||||||||||||.|||.|..|| .||| ||||||||.|||
Sbjct 1626  CCGTTCCGTGGCCATCGAGGTGGACGGTGAGATATACCACGTAGGCTTGGATACTG-TGCCTCAGCCCCGCAAC  1698

Query 1684  CTCACCAAGCGGCACTGGCCAGGGGCCCCTGAGGACCAAGATGACAAGGATGGTGGGGACTTCAGTGGCACTGG  1757
            ||.|.|||||.|||||||||||||||||||||.|||||||||||||||||||||||....||||||||.|||||
Sbjct 1699  CTTAGCAAGCCGCACTGGCCAGGGGCCCCTGAAGACCAAGATGACAAGGATGGTGGCAGTTTCAGTGGTACTGG  1772

Query 1758  AGGCCTTCCCGACTACTCAGCCGCCAACCCCATTAAAGTGACACATCGGTGCTACATCCTAGAGAACGACACAG  1831
            .||||||||.||.||.||.|||.||||.|||||.||||||||.|||||||||||||||||.|||||.|||||||
Sbjct 1773  TGGCCTTCCAGATTATTCTGCCCCCAATCCCATCAAAGTGACCCATCGGTGCTACATCCTTGAGAATGACACAG  1846

Query 1832  TCCAGTGTGACCTGGACCTGTACAAGTCCCTGCAGGCCTGGAAAGACCACAAGCTGCACATCGACCACGAGATT  1905
            |||||||.|||.|||||||||||||||||||||||||.|||||||||||||||||||||||||||||.|||||.
Sbjct 1847  TCCAGTGCGACTTGGACCTGTACAAGTCCCTGCAGGCTTGGAAAGACCACAAGCTGCACATCGACCATGAGATC  1920

Query 1906  GAAACCCTGCAGAACAAAATTAAGAACCTGAGGGAAGTCCGAGGTCACCTGAAGAAAAAGCGGCCAGAAGAATG  1979
            |||||||||||||||||||||||||||||..|.||||||.|.||||||||||||||.|||||.||.||||||||
Sbjct 1921  GAAACCCTGCAGAACAAAATTAAGAACCTTCGAGAAGTCAGGGGTCACCTGAAGAAGAAGCGACCGGAAGAATG  1994

Query 1980  TGACTGTCACAAAATCAGCTACCACACCCAGCACAAAGGCCGCCTCAAGCACAGAGGCTCCAGTCTGCATCCTT  2053
            ||||||.||.|.||||||.|||||||.|||.|||||||||||.||||||||||.|||||||||.|||||.||||
Sbjct 1995  TGACTGCCATAGAATCAGTTACCACAGCCAACACAAAGGCCGTCTCAAGCACAAAGGCTCCAGCCTGCACCCTT  2068

Query 2054  TCAGGAAGGGCCTGCAAGAGAAGGACAAGGTGTGGCTGTTGCGGGAGCAGAAGCGCAAGAAGAAACTCCGCAAG  2127
            ||||||||||.|||||.|||||||||||||||||||||.|||||||||||||.||||||||||||||.||||||
Sbjct 2069  TCAGGAAGGGTCTGCAGGAGAAGGACAAGGTGTGGCTGCTGCGGGAGCAGAAACGCAAGAAGAAACTGCGCAAG  2142

Query 2128  CTGCTCAAGCGCCTGCAGAACAACGACACGTGCAGCATGCCAGGCCTCACGTGCTTCACCCACGACAACCAGCA  2201
            ||||||||.||.||||||||||||||.||||||||||||||.||||||||||||||.||||||||||||||.||
Sbjct 2143  CTGCTCAAACGGCTGCAGAACAACGATACGTGCAGCATGCCCGGCCTCACGTGCTTTACCCACGACAACCACCA  2216

Query 2202  CTGGCAGACGGCGCCTTTCTGGACACTGGGGCCTTTCTGTGCCTGCACCAGCGCCAACAATAACACGTACTGGT  2275
            |||||||||||||||..|||||||.||||||||.|||||.||||||||||||||||||||.|||||||||||||
Sbjct 2217  CTGGCAGACGGCGCCACTCTGGACGCTGGGGCCGTTCTGCGCCTGCACCAGCGCCAACAACAACACGTACTGGT  2290

Query 2276  GCATGAGGACCATCAATGAGACTCACAATTTCCTCTTCTGTGAATTTGCAACTGGCTTCCTAGAGTACTTTGAT  2349
            ||.||||||||||.||||||||.|||||.|||||||||||.|||||||||||.||||||.||||.||||||||.
Sbjct 2291  GCTTGAGGACCATAAATGAGACCCACAACTTCCTCTTCTGCGAATTTGCAACCGGCTTCATAGAATACTTTGAC  2364

Query 2350  CTCAACACAGACCCCTACCAGCTGATGAATGCAGTGAACACACTGGACAGGGATGTCCTCAACCAGCTACACGT  2423
            ||||..|||||||||||||||||||||||.||.||||||||||||||||||||.|||||.|||||.||.|||||
Sbjct 2365  CTCAGTACAGACCCCTACCAGCTGATGAACGCGGTGAACACACTGGACAGGGACGTCCTTAACCAACTGCACGT  2438

Query 2424  ACAGCTCATGGAGCTGAGGAGCTGCAAGGGTTACAAGCAGTGTAACCCCCGGACTCGAAACATGGACCTGGGAC  2497
            .||||||||||||||.||||||||.||.||.|||||||||||.|||||||||||.||.||||||||||||||.|
Sbjct 2439  GCAGCTCATGGAGCTAAGGAGCTGTAAAGGCTACAAGCAGTGCAACCCCCGGACCCGCAACATGGACCTGGGGC  2512

Query 2498  TTAAAGATGGAGGAAGCTATGAGCAATACAGGCAGTTTCAGCGTCGAAAGTGGCCAGAAATGAAGAGACCTTCT  2571
            |||.|||.||||||||||||||.||||||||||||||||||||||||||.||||||||||||||||||||||||
Sbjct 2513  TTAGAGACGGAGGAAGCTATGAACAATACAGGCAGTTTCAGCGTCGAAAATGGCCAGAAATGAAGAGACCTTCT  2586

Query 2572  TCCAAATCACTGGGACAACTGTGGGAAGGCTGGGAAGGTTAAAAGCT  2618
            |||||||||||||||||.||.||||||||.||||||||.        
Sbjct 2587  TCCAAATCACTGGGACAGCTATGGGAAGGTTGGGAAGGC--------  2625

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