Nucleotide Global Alignment

Description

• Query: TRCN0000488616
• Subject: XM_017013218.1
• Aligned Length: 1774
• Identities: 1434
• Gaps: 314

Alignment

Query    1  ATGTGCACCGTAG---TGGACCCTCGCATTGT-----CCGGAGATACCTACTCAGGCGGCAGCTCGGGC-----  61
            |||    ||..||   .||||     ||..||     |.|.|||.|||       |.|||||   ||||     
Sbjct    1  ATG----CCAGAGGCTGGGAC-----CAGGGTGGGGGCAGAAGAGACC-------GTGGCAG---GGGCTAGAT  55

Query   62  -----AGG-------GGGCCTATGGCATTGTGTGGAAGGCAGTGGACCGGAGGACTGGTGAGGTCGTGGCCATC  123
                 |||       .||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   56  TCTGGAGGAATCTGAAGGCCTATGGCATTGTGTGGAAGGCAGTGGACCGGAGGACTGGTGAGGTCGTGGCCATC  129

Query  124  AAGAAAATCTTTGATGCTTTTAGGGATAAGACAGATGCC-----------------------------------  162
            |||||||||||||||||||||||||||||||||||||||                                   
Sbjct  130  AAGAAAATCTTTGATGCTTTTAGGGATAAGACAGATGCCCAGGACATGGGCTTCCTTCTTGCTCCACCCACCCA  203

Query  163  ----------------------CAGAGAACATTCCGGGAAATCACGCTCCTCCAGGAGTTTGGGGACCATCCCA  214
                                  ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  204  CACACCTGTGTTTCTGTCTCTTCAGAGAACATTCCGGGAAATCACGCTCCTCCAGGAGTTTGGGGACCATCCCA  277

Query  215  ACATCATCAGCCTCCTTGACGTGATCCGGGCAGAGAACGACAGGGACATTTACCTGGTGTTTGAGTTTATGGAC  288
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  278  ACATCATCAGCCTCCTTGACGTGATCCGGGCAGAGAACGACAGGGACATTTACCTGGTGTTTGAGTTTATGGAC  351

Query  289  ACTGACCTGAACGCAGTCATCCGGAAGGGCGGCCTGCTGCAGGACGTCCACGTGCGCTCCATCTTCTACCAGCT  362
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  352  ACTGACCTGAACGCAGTCATCCGGAAGGGCGGCCTGCTGCAGGACGTCCACGTGCGCTCCATCTTCTACCAGCT  425

Query  363  CCTGCGGGCCACCCGGTTCCTCCACTCGGGGCACGTTGTGCACCGGGACCAGAAGCCGTCCAATGTGCTCCTGG  436
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  426  CCTGCGGGCCACCCGGTTCCTCCACTCGGGGCACGTTGTGCACCGGGACCAGAAGCCGTCCAATGTGCTCCTGG  499

Query  437  ATGCCAACTGCACAGTGAAGCTGTGTGACTTTGGCCTGGCCCGCTCCCTGGGCGACCTCCCCGAGGGGCCTGAG  510
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  500  ATGCCAACTGCACAGTGAAGCTGTGTGACTTTGGCCTGGCCCGCTCCCTGGGCGACCTCCCCGAGGGGCCTGAG  573

Query  511  GACCAGGCCGTGACAGAGTACGTGGCCACACGCTGGTACCGAGCACCGGAGGTGCTGCTCTCTTCGCACCGATA  584
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  574  GACCAGGCCGTGACAGAGTACGTGGCCACACGCTGGTACCGAGCACCGGAGGTGCTGCTCTCTTCGCACCGATA  647

Query  585  CACCCTTGGGGTGGACATGTGGAGTCTGGGCTGTATCCTGGGGGAGATGCTGCGGGGGAGACCCCTGTTCCCCG  658
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  648  CACCCTTGGGGTGGACATGTGGAGTCTGGGCTGTATCCTGGGGGAGATGCTGCGGGGGAGACCCCTGTTCCCCG  721

Query  659  GCACGTCCACCCTCCACCAGCTGGAGCTGATCCTGGAGACCATCCCACCGCCATCTGAGGAGGACCTCCTGGCT  732
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            
Sbjct  722  GCACGTCCACCCTCCACCAGCTGGAGCTGATCCTGGAGACCATCCCACCGCCATCTGAGGAG------------  783

Query  733  CTCGGCTCAGGCTGCCGTGCCTCTGTGCTGCACCAGCTGGGGTCCCGGCCACGACAGACGCTGGATGCCCTCCT  806
                                                                                      
Sbjct  784  --------------------------------------------------------------------------  783

Query  807  ACCGCCAGACACCTCCCCAGAGGCCTTGGACCTCCTTAGGCGACTCCTGGTGTTCGCCCCGGACAAGCGGTTAA  880
                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  784  -------GACACCTCCCCAGAGGCCTTGGACCTCCTTAGGCGACTCCTGGTGTTCGCCCCGGACAAGCGGTTAA  850

Query  881  GCGCGACCCAGGCACTGCAGCACCCCTACGTGCAGAGGTTCCACTGCCCCAGCGACGAGTGGGCACGAGAGGCA  954
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  851  GCGCGACCCAGGCACTGCAGCACCCCTACGTGCAGAGGTTCCACTGCCCCAGCGACGAGTGGGCACGAGAGGCA  924

Query  955  GATGTGCGGCCCCGGGCACACGAAGGGGTCCAGCTCTCTGTGCCTGAGTACCGCAGCCGCGTCTATCAGATGAT  1028
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  925  GATGTGCGGCCCCGGGCACACGAAGGGGTCCAGCTCTCTGTGCCTGAGTACCGCAGCCGCGTCTATCAGATGAT  998

Query 1029  CCTGGAGTGTGGAGGCAGCAGCGGCACCTCGAGAGAGAAGGGCCCGGAGGGTGTCTCCCCAAGCCAGGCACACC  1102
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  999  CCTGGAGTGTGGAGGCAGCAGCGGCACCTCGAGAGAGAAGGGCCCGGAGGGTGTCTCCCCAAGCCAGGCACACC  1072

Query 1103  TGCACAAACCCAGAGCCGACCCTCAGCTGCCTTCTAGGACACCTGTGCAGGGTCCCAGACCCAGGCCCCAGAGC  1176
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1073  TGCACAAACCCAGAGCCGACCCTCAGCTGCCTTCTAGGACACCTGTGCAGGGTCCCAGACCCAGGCCCCAGAGC  1146

Query 1177  AGCCCAGGCCATGACCCTGCCGAGCACGAGTCCCCCCGTGCAGCCAAGAACGTTCCCAGGCAGAACTCCGCTCC  1250
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1147  AGCCCAGGCCATGACCCTGCCGAGCACGAGTCCCCCCGTGCAGCCAAGAACGTTCCCAGGCAGAACTCCGCTCC  1220

Query 1251  CCTGCTCCAAACTGCTCTCCTAGGGAATGGGGAAAGGCCCCCTGGGGCGAAGGAAGCGCCCCCCTTGACACTCT  1324
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1221  CCTGCTCCAAACTGCTCTCCTAGGGAATGGGGAAAGGCCCCCTGGGGCGAAGGAAGCGCCCCCCTTGACACTCT  1294

Query 1325  CGCTGGTGAAGCCAAGCGGGAGGGGAGCTGCGCCCTCCCTGACCTCCCAGGCTGCGGCTCAGGTGGCCAACCAG  1398
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1295  CGCTGGTGAAGCCAAGCGGGAGGGGAGCTGCGCCCTCCCTGACCTCCCAGGCTGCGGCTCAGGTGGCCAACCAG  1368

Query 1399  GCCCTGATCCGGGGTGACTGGAACCGGGGCGGTGGGGTGAGGGTGGCCAGCGTACAACAGGT------------  1460
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            
Sbjct 1369  GCCCTGATCCGGGGTGACTGGAACCGGGGCGGTGGGGTGAGGGTGGCCAGCGTACAACAGGTAAGCCCGGCCCA  1442

Query 1461  --------CCCTCCCCGGCTTCCTCCGGAGG----------------CCCGGCCCGGCCGGAGGATGTTCAGCA  1510
                    ||.||||| .|.||||||                     |||  |||.||       |.|||    
Sbjct 1443  GTCTGCCCCCGTCCCC-TCATCCTCC-----TTTCCCCTTTCCCCTTCCC--CCCTGC-------TTTTC----  1497

Query 1511  CCTCTGCCTT--GCAGGGTGCCCAGGGGGGTG------------CCAGGGCTTT----GCT-TGGAGGCTACTC  1565
            ||||  ||||  .||.|.|.||||     .||            ||||    ||    .|| |.||||  || |
Sbjct 1498  CCTC--CCTTCCCCATGCTTCCCA-----TTGCCCCTCCAATGTCCAG----TTCAAATCTCTCGAGG--AC-C  1557

Query 1566  CCAA-GCCTACGGGACTGTCTGCCACTCGGCACTGGGCCACCTGCCC-CTGCTGGAGGGGCACC---ATGTG  1632
            .||| ||||             ||.|||  |||||   ||||  ||| |||.|     |||.||   |||  
Sbjct 1558  TCAAGGCCT-------------CCCCTC--CACTG---CACC--CCCTCTGAT-----GGCCCCTTTATG--  1602