Nucleotide Global Alignment
Description
- Query:
- TRCN0000488630
- Subject:
- XM_006537659.2
- Aligned Length:
- 2664
- Identities:
- 841
- Gaps:
- 1713
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGAGAGCTTGTCAACATTCCACTGTTACAGATGCTCACCCTGGTTGCCTTCAGCGGGACTGAGAAACTTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAAAGCCCCTGTCATCACCACGCCTCTTGAAACTGTAGATGCCTTGGTTGAAGAAGTAGCGACTTTCATGTGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGTGGAATCCTACCCTCAGCCCGAGATTTCTTGGACCAGAAATAAAATTCTCATTAAGCTGTTTGACACCCGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TACAGCATCCGGGAGAATGGTCAGCTCCTCACCATTCTGAGCGTGGAAGACAGTGATGATGGCATCTACTGCTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CATAGCCAACAATGGAGTGGGAGGAGCCGTGGAGAGTTGTGGTGCCCTGCAAGTGAAGATGAAACCTAAAATAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCGTCCTCCCATTAATGTAAAAATAATAGAGGGATTGAAGGCAGTTCTGCCGTGCACTACGATGGGTAACCCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAACCATCTGTGTCCTGGATCAAGGGGGACAATGCTCTCAGGGAAAATTCCAGAATCGCAGTTCTTGAATCTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAGCTTAAGGATCCATAATGTGCAAAAGGAAGATGCAGGACAGTACCGCTGTGTGGCCAAAAACAGCCTGGGCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGCTTACTCCAAACTGGTGAAGCTGGAAGTGGAGGCTCTTAATATGACAAATGCCACAGAGAGAGAAGACAGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAACCTGAGCAGGACGCTAAAGTTTTTGCAAGAATCCTGCGTGCTCCTGAATCCCACAATGTCACCTTTGGTTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTTTGTAACCCTACGCTGCACAGCAATAGGCATCCCTGTCCCCACCATCAGCTGGATTGAAAACGGAAATGCTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTTCTTCAGGTTCCATTCAAGAGAGTGTGAAAGACCGAGTGATTGACTCAAGACTCCAGCTCTTCATCACAAAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCAGGACTCTACACATGCATAGCTACCAATAAGCACGGAGAAAAGTTCAGTACCGCAAAGGCTGCAGCCACTGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAGCATAGCAGAATGGAGTAAGTCACAGAAAGACAGCCAAGGCTACTGTGCCCAGTACAGAGGGGAGGTGTGTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATGCAGTCCTGGCGAAAGATGCTCTTGTCTTCTTCAACACCTCCTACCGGGACCCCGAGGACGCCCAGGAGCTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTGATCCACACTGCGTGGAATGAGCTGAAGGCTGTGAGTCCACTGTGCCGGCCAGCTGCTGAGGCTCTGCTGTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TAACCACCTCTTCCAAGAGTGCAGCCCTGGAGTGGTACCTACTCCCATGCCCATTTGCAGAGAGTACTGCCTGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CGGTAAAGGAGCTCTTCTGTGCAAAGGAATGGCAGGCAATGGAAGGAAAGGCCCACCGGGGCCTCTACAGATCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGGATGCATCTCCTTCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGCACCGGGACCCCACAGCCTGCACAAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACTGCCATATTTAGATTATAAAAAAGAAAACATAACAACATTCCCGTCAATAACGTCCTCCAGGCCGAGCGCGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACATTCCAAACCTGCCTGCCTCCACCTCTTCCTTTGCCGTCTCGCCTGCGTACTCCATGACCGTCATCATCTCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ATCGTGTCCAGCTTTGCCCTGTTTGCTCTTCTCACCATCGCTACTCTCTATTGCTGCCGAAGGAGGAAAGAATG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GAAAAATAAGAAAAGAGAGTCGACCGCGGTGACCCTCACCACGTTGCCTTCCGAGCTCCTGCTGGATAGGCTCC 1702
Query 1 -----------ATGTACCAGAGGATGCCGCTCCTTCTGAACCCCAAATTGCTCAGCCTGGAGTATCCAAGGAAT 63
|||||||||||||||||.|||||||||||.||.||.||||||||||||||||||||.||||||
Sbjct 1703 ATCCCAACCCCATGTACCAGAGGATGCCACTCCTTCTGAATCCTAAGTTGCTCAGCCTGGAGTATCCGAGGAAT 1776
Query 64 AACATTGAATATGTGAGAGACATCGGAGAGGGAGCGTTTGGAAGGGTGTTTCAAGCAAGGGCACCAGGCTTACT 137
||||||||.|||||..||||||||||||||||.|||||||||||.||.||.|||||||||||.||.|||||.||
Sbjct 1777 AACATTGAGTATGTCCGAGACATCGGAGAGGGGGCGTTTGGAAGAGTCTTCCAAGCAAGGGCCCCTGGCTTGCT 1850
Query 138 TCCCTATGAACCTTTCACTATGGTGGCAGTAAAGATGCTCAAAGAAGAAGCCTCGGCAGATATGCAAGCGGACT 211
.||.|||||||||||||||||||||||.||.||||||||.||.|||||.|||||.|||||.|||||||||||||
Sbjct 1851 GCCTTATGAACCTTTCACTATGGTGGCCGTGAAGATGCTTAAGGAAGAGGCCTCTGCAGACATGCAAGCGGACT 1924
Query 212 TTCAGAGGGAGGCAGCCCTCATGGCAGAATTTGACAACCCTAACATTGTGAAGCTATTAGGAGTGTGTGCTGTC 285
|||||||||||||.||||||||||||||.|||||||||||.|||||||||||.||.|||||.||||||||.||.
Sbjct 1925 TTCAGAGGGAGGCGGCCCTCATGGCAGAGTTTGACAACCCCAACATTGTGAAACTCTTAGGTGTGTGTGCCGTT 1998
Query 286 GGGAAGCCAATGTGCCTGCTCTTTGAATACATGGCCTATGGTGACCTCAATGAGTTCCTCCGCAGCATGTCCCC 359
||||||||.|||||.||||||||||||||.||||||||||||||||||||||||||||||||.||.||||||||
Sbjct 1999 GGGAAGCCGATGTGTCTGCTCTTTGAATATATGGCCTATGGTGACCTCAATGAGTTCCTCCGAAGTATGTCCCC 2072
Query 360 TCACACCGTGTGCAGCCTCAGTCACAGTGACTTGTCTATGAGGGCTCAGGTCTCCAGCCCTGGGCCCCCACCCC 433
.|||||.||.|||||||||||.|||||||||.||||.|.||||||||.|||.||.||||||||.||.|||||.|
Sbjct 2073 GCACACTGTTTGCAGCCTCAGCCACAGTGACCTGTCCACGAGGGCTCGGGTGTCTAGCCCTGGTCCTCCACCAC 2146
Query 434 TCTCCTGTGCTGAGCAGCTTTGCATTGCCAGGCAGGTGGCAGCTGGCATGGCTTACCTCTCAGAACGTAAGTTT 507
|.||||||||.||.|||||.||||||||||||||||||||||||||||||||.|||||.|||||.||.||||||
Sbjct 2147 TGTCCTGTGCAGAACAGCTCTGCATTGCCAGGCAGGTGGCAGCTGGCATGGCCTACCTTTCAGAGCGCAAGTTT 2220
Query 508 GTTCACCGAGATTTAGCCACCAGGAACTGCCTGGTGGGCGAGAACATGGTGGTGAAAATTGCCGACTTTGGCCT 581
||.|||||.||.|||||.|||||||||||||||||.||.||||.||||||||||||||||||.|||||||||||
Sbjct 2221 GTCCACCGGGACTTAGCTACCAGGAACTGCCTGGTTGGGGAGACCATGGTGGTGAAAATTGCAGACTTTGGCCT 2294
Query 582 CTCCAGGAACATCTACTCAGCAGACTACTACAAAGCTAATGAAAACGACGCTATCCCTATCCGTTGGATGCCAC 655
|||||||||||||||.||.||||||||||||||||||.|||.|||.|||||.|||||||||||.||||||||.|
Sbjct 2295 CTCCAGGAACATCTATTCCGCAGACTACTACAAAGCTGATGGAAATGACGCCATCCCTATCCGCTGGATGCCGC 2368
Query 656 CAGAGTCCATTTTTTATAACCGCTACACTACAGAGTCTGATGTGTGGGCCTATGGCGTGGTCCTCTGGGAGATC 729
|.|||||.||.||.||.|||||||||||.||.|||||.|||||.|||||||||||.||||||||||||||||||
Sbjct 2369 CCGAGTCTATCTTCTACAACCGCTACACCACTGAGTCGGATGTATGGGCCTATGGTGTGGTCCTCTGGGAGATC 2442
Query 730 TTCTCCTATGGCCTGCAGCCCTACTATGGGATGGCCCATGAGGAGGTCATTTACTACGTGCGAGATGGCAACAT 803
|||||||||||.|||||||||||||||||.||||||||.|||||||||||||||||.|||.|||||||||||||
Sbjct 2443 TTCTCCTATGGGCTGCAGCCCTACTATGGAATGGCCCACGAGGAGGTCATTTACTATGTGAGAGATGGCAACAT 2516
Query 804 CCTCTCCTGCCCTGAGAACTGCCCCGTGGAGCTGTACAATCTCATGCGTCTATGTTGGAGCAAGCTGCCTGCAG 877
||||.||||||||||||||||||||.||||.||||||||.||||||||.||.||||||||||||||||||||.|
Sbjct 2517 CCTCGCCTGCCCTGAGAACTGCCCCTTGGAACTGTACAACCTCATGCGCCTGTGTTGGAGCAAGCTGCCTGCTG 2590
Query 878 ACAGACCCAGTTTCACCAGTATTCACCGAATTCTGGAACGCATGTGTGAGAGGGCAGAGGGAACTGTGAGTGTC 951
|.||||||||.|||..||||||.|||.|.||.|||.|.||||||||.|||||.|||||||||||.|||.|||||
Sbjct 2591 ATAGACCCAGCTTCTGCAGTATCCACAGGATCCTGCAGCGCATGTGCGAGAGAGCAGAGGGAACGGTGGGTGTC 2664
