Nucleotide Global Alignment
Description
- Query:
- TRCN0000488630
- Subject:
- XM_006537661.2
- Aligned Length:
- 2640
- Identities:
- 841
- Gaps:
- 1689
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGAGAGCTTGTCAACATTCCACTGTTACAGATGCTCACCCTGGTTGCCTTCAGCGGGACTGAGAAACTTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAAAGCCCCTGTCATCACCACGCCTCTTGAAACTGTAGATGCCTTGGTTGAAGAAGTAGCGACTTTCATGTGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGTGGAATCCTACCCTCAGCCCGAGATTTCTTGGACCAGAAATAAAATTCTCATTAAGCTGTTTGACACCCGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TACAGCATCCGGGAGAATGGTCAGCTCCTCACCATTCTGAGCGTGGAAGACAGTGATGATGGCATCTACTGCTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CATAGCCAACAATGGAGTGGGAGGAGCCGTGGAGAGTTGTGGTGCCCTGCAAGTGAAGATGAAACCTAAAATAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCGTCCTCCCATTAATGTAAAAATAATAGAGGGATTGAAGGCAGTTCTGCCGTGCACTACGATGGGTAACCCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAACCATCTGTGTCCTGGATCAAGGGGGACAATGCTCTCAGGGAAAATTCCAGAATCGCAGTTCTTGAATCTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAGCTTAAGGATCCATAATGTGCAAAAGGAAGATGCAGGACAGTACCGCTGTGTGGCCAAAAACAGCCTGGGCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGCTTACTCCAAACTGGTGAAGCTGGAAGTGGAGGCTCTTAATATGACAAATGCCACAGAGAGAGAAGACAGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAACCTGAGCAGGACGCTAAAGTTTTTGCAAGAATCCTGCGTGCTCCTGAATCCCACAATGTCACCTTTGGTTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTTTGTAACCCTACGCTGCACAGCAATAGGCATCCCTGTCCCCACCATCAGCTGGATTGAAAACGGAAATGCTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTTCTTCAGGTTCCATTCAAGAGAGTGTGAAAGACCGAGTGATTGACTCAAGACTCCAGCTCTTCATCACAAAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCAGGACTCTACACATGCATAGCTACCAATAAGCACGGAGAAAAGTTCAGTACCGCAAAGGCTGCAGCCACTGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAGCATAGCAGAATGGAGTAAGTCACAGAAAGACAGCCAAGGCTACTGTGCCCAGTACAGAGGGGAGGTGTGTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ATGCAGTCCTGGCGAAAGATGCTCTTGTCTTCTTCAACACCTCCTACCGGGACCCCGAGGACGCCCAGGAGCTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTGATCCACACTGCGTGGAATGAGCTGAAGGCTGTGAGTCCACTGTGCCGGCCAGCTGCTGAGGCTCTGCTGTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TAACCACCTCTTCCAAGAGTGCAGCCCTGGAGTGGTACCTACTCCCATGCCCATTTGCAGAGAGTACTGCCTGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CGGTAAAGGAGCTCTTCTGTGCAAAGGAATGGCAGGCAATGGAAGGAAAGGCCCACCGGGGCCTCTACAGATCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGGATGCATCTCCTTCCGGTACCAGAGTGCAGCAAGCTTCCCAGCATGCACCGGGACCCCACAGCCTGCACAAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACTGCCATATTTAGCATTCCCGTCAATAACGTCCTCCAGGCCGAGCGCGGACATTCCAAACCTGCCTGCCTCCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCTCTTCCTTTGCCGTCTCGCCTGCGTACTCCATGACCGTCATCATCTCCATCGTGTCCAGCTTTGCCCTGTTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GCTCTTCTCACCATCGCTACTCTCTATTGCTGCCGAAGGAGGAAAGAATGGAAAAATAAGAAAAGAGAGTCGAC 1628
Query 1 -------------------------------------------------------------ATGTACCAGAGGA 13
|||||||||||||
Sbjct 1629 CGCGGTGACCCTCACCACGTTGCCTTCCGAGCTCCTGCTGGATAGGCTCCATCCCAACCCCATGTACCAGAGGA 1702
Query 14 TGCCGCTCCTTCTGAACCCCAAATTGCTCAGCCTGGAGTATCCAAGGAATAACATTGAATATGTGAGAGACATC 87
||||.|||||||||||.||.||.||||||||||||||||||||.||||||||||||||.|||||..||||||||
Sbjct 1703 TGCCACTCCTTCTGAATCCTAAGTTGCTCAGCCTGGAGTATCCGAGGAATAACATTGAGTATGTCCGAGACATC 1776
Query 88 GGAGAGGGAGCGTTTGGAAGGGTGTTTCAAGCAAGGGCACCAGGCTTACTTCCCTATGAACCTTTCACTATGGT 161
||||||||.|||||||||||.||.||.|||||||||||.||.|||||.||.||.||||||||||||||||||||
Sbjct 1777 GGAGAGGGGGCGTTTGGAAGAGTCTTCCAAGCAAGGGCCCCTGGCTTGCTGCCTTATGAACCTTTCACTATGGT 1850
Query 162 GGCAGTAAAGATGCTCAAAGAAGAAGCCTCGGCAGATATGCAAGCGGACTTTCAGAGGGAGGCAGCCCTCATGG 235
|||.||.||||||||.||.|||||.|||||.|||||.||||||||||||||||||||||||||.||||||||||
Sbjct 1851 GGCCGTGAAGATGCTTAAGGAAGAGGCCTCTGCAGACATGCAAGCGGACTTTCAGAGGGAGGCGGCCCTCATGG 1924
Query 236 CAGAATTTGACAACCCTAACATTGTGAAGCTATTAGGAGTGTGTGCTGTCGGGAAGCCAATGTGCCTGCTCTTT 309
||||.|||||||||||.|||||||||||.||.|||||.||||||||.||.||||||||.|||||.|||||||||
Sbjct 1925 CAGAGTTTGACAACCCCAACATTGTGAAACTCTTAGGTGTGTGTGCCGTTGGGAAGCCGATGTGTCTGCTCTTT 1998
Query 310 GAATACATGGCCTATGGTGACCTCAATGAGTTCCTCCGCAGCATGTCCCCTCACACCGTGTGCAGCCTCAGTCA 383
|||||.||||||||||||||||||||||||||||||||.||.||||||||.|||||.||.|||||||||||.||
Sbjct 1999 GAATATATGGCCTATGGTGACCTCAATGAGTTCCTCCGAAGTATGTCCCCGCACACTGTTTGCAGCCTCAGCCA 2072
Query 384 CAGTGACTTGTCTATGAGGGCTCAGGTCTCCAGCCCTGGGCCCCCACCCCTCTCCTGTGCTGAGCAGCTTTGCA 457
|||||||.||||.|.||||||||.|||.||.||||||||.||.|||||.||.||||||||.||.|||||.||||
Sbjct 2073 CAGTGACCTGTCCACGAGGGCTCGGGTGTCTAGCCCTGGTCCTCCACCACTGTCCTGTGCAGAACAGCTCTGCA 2146
Query 458 TTGCCAGGCAGGTGGCAGCTGGCATGGCTTACCTCTCAGAACGTAAGTTTGTTCACCGAGATTTAGCCACCAGG 531
||||||||||||||||||||||||||||.|||||.|||||.||.||||||||.|||||.||.|||||.||||||
Sbjct 2147 TTGCCAGGCAGGTGGCAGCTGGCATGGCCTACCTTTCAGAGCGCAAGTTTGTCCACCGGGACTTAGCTACCAGG 2220
Query 532 AACTGCCTGGTGGGCGAGAACATGGTGGTGAAAATTGCCGACTTTGGCCTCTCCAGGAACATCTACTCAGCAGA 605
|||||||||||.||.||||.||||||||||||||||||.||||||||||||||||||||||||||.||.|||||
Sbjct 2221 AACTGCCTGGTTGGGGAGACCATGGTGGTGAAAATTGCAGACTTTGGCCTCTCCAGGAACATCTATTCCGCAGA 2294
Query 606 CTACTACAAAGCTAATGAAAACGACGCTATCCCTATCCGTTGGATGCCACCAGAGTCCATTTTTTATAACCGCT 679
|||||||||||||.|||.|||.|||||.|||||||||||.||||||||.||.|||||.||.||.||.|||||||
Sbjct 2295 CTACTACAAAGCTGATGGAAATGACGCCATCCCTATCCGCTGGATGCCGCCCGAGTCTATCTTCTACAACCGCT 2368
Query 680 ACACTACAGAGTCTGATGTGTGGGCCTATGGCGTGGTCCTCTGGGAGATCTTCTCCTATGGCCTGCAGCCCTAC 753
||||.||.|||||.|||||.|||||||||||.|||||||||||||||||||||||||||||.||||||||||||
Sbjct 2369 ACACCACTGAGTCGGATGTATGGGCCTATGGTGTGGTCCTCTGGGAGATCTTCTCCTATGGGCTGCAGCCCTAC 2442
Query 754 TATGGGATGGCCCATGAGGAGGTCATTTACTACGTGCGAGATGGCAACATCCTCTCCTGCCCTGAGAACTGCCC 827
|||||.||||||||.|||||||||||||||||.|||.|||||||||||||||||.|||||||||||||||||||
Sbjct 2443 TATGGAATGGCCCACGAGGAGGTCATTTACTATGTGAGAGATGGCAACATCCTCGCCTGCCCTGAGAACTGCCC 2516
Query 828 CGTGGAGCTGTACAATCTCATGCGTCTATGTTGGAGCAAGCTGCCTGCAGACAGACCCAGTTTCACCAGTATTC 901
|.||||.||||||||.||||||||.||.||||||||||||||||||||.||.||||||||.|||..||||||.|
Sbjct 2517 CTTGGAACTGTACAACCTCATGCGCCTGTGTTGGAGCAAGCTGCCTGCTGATAGACCCAGCTTCTGCAGTATCC 2590
Query 902 ACCGAATTCTGGAACGCATGTGTGAGAGGGCAGAGGGAACTGTGAGTGTC 951
||.|.||.|||.|.||||||||.|||||.|||||||||||.|||.|||||
Sbjct 2591 ACAGGATCCTGCAGCGCATGTGCGAGAGAGCAGAGGGAACGGTGGGTGTC 2640
